Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
Trim11Q99PQ2 Gm26274-201ENSMUST00000157103 321 ntBASIC1.67□□□□□ -2.14
Trim11Q99PQ2 Gm23558-201ENSMUST00000157823 80 ntBASIC1.66□□□□□ -2.14
Trim11Q99PQ2 Gm23221-201ENSMUST00000158118 93 ntBASIC1.66□□□□□ -2.14
Trim11Q99PQ2 Gm22466-201ENSMUST00000175278 69 ntBASIC1.66□□□□□ -2.14
Trim11Q99PQ2 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.66□□□□□ -2.14
Trim11Q99PQ2 Gm25040-201ENSMUST00000103877 66 ntBASIC1.65□□□□□ -2.15
Trim11Q99PQ2 Gm24895-201ENSMUST00000122742 74 ntBASIC1.65□□□□□ -2.15
Trim11Q99PQ2 Gm23048-201ENSMUST00000157237 129 ntBASIC1.65□□□□□ -2.15
Trim11Q99PQ2 Traj60-201ENSMUST00000167781 54 ntBASIC1.65□□□□□ -2.15
Trim11Q99PQ2 Gm22401-201ENSMUST00000174927 117 ntBASIC1.65□□□□□ -2.15
Trim11Q99PQ2 Gm27265-201ENSMUST00000183559 77 ntBASIC1.65□□□□□ -2.15
Trim11Q99PQ2 Gm22087-201ENSMUST00000158339 88 ntBASIC1.64□□□□□ -2.15
Trim11Q99PQ2 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.64□□□□□ -2.15
Trim11Q99PQ2 Gm27937-201ENSMUST00000183605 88 ntBASIC1.64□□□□□ -2.15
Trim11Q99PQ2 AC238676.2-201ENSMUST00000220910 94 ntBASIC1.64□□□□□ -2.15
Trim11Q99PQ2 CT030170.1-201ENSMUST00000222183 148 ntBASIC1.64□□□□□ -2.15
Trim11Q99PQ2 Gm22785-201ENSMUST00000104087 132 ntBASIC1.63□□□□□ -2.15
Trim11Q99PQ2 Gm22663-201ENSMUST00000158721 102 ntBASIC1.63□□□□□ -2.15
Trim11Q99PQ2 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.63□□□□□ -2.15
Trim11Q99PQ2 Gm44396-201ENSMUST00000199843 114 ntBASIC1.63□□□□□ -2.15
Trim11Q99PQ2 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Trim11Q99PQ2 Gm23730-201ENSMUST00000083236 107 ntBASIC1.63□□□□□ -2.15
Trim11Q99PQ2 Mir377-201ENSMUST00000083504 68 ntBASIC1.63□□□□□ -2.15
Trim11Q99PQ2 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
Trim11Q99PQ2 Mir7050-201ENSMUST00000184636 60 ntBASIC1.62□□□□□ -2.15
Trim11Q99PQ2 Mir7017-201ENSMUST00000184894 62 ntBASIC1.62□□□□□ -2.15
Trim11Q99PQ2 Mir376b-201ENSMUST00000195930 82 ntBASIC1.62□□□□□ -2.15
Trim11Q99PQ2 Gm24624-201ENSMUST00000082617 164 ntBASIC1.62□□□□□ -2.15
Trim11Q99PQ2 Snord96a-201ENSMUST00000082791 81 ntBASIC1.62□□□□□ -2.15
Trim11Q99PQ2 Gm24549-201ENSMUST00000158647 139 ntBASIC1.61□□□□□ -2.15
Trim11Q99PQ2 Gm22664-201ENSMUST00000158719 105 ntBASIC1.61□□□□□ -2.15
Trim11Q99PQ2 Gm24612-201ENSMUST00000083267 107 ntBASIC1.61□□□□□ -2.15
Trim11Q99PQ2 Snord69-201ENSMUST00000104024 80 ntBASIC1.6□□□□□ -2.15
Trim11Q99PQ2 Gm23010-201ENSMUST00000104151 126 ntBASIC1.6□□□□□ -2.15
Trim11Q99PQ2 Gm22717-201ENSMUST00000122703 171 ntBASIC1.6□□□□□ -2.15
Trim11Q99PQ2 Mir3098-201ENSMUST00000175416 87 ntBASIC1.6□□□□□ -2.15
Trim11Q99PQ2 Gm29344-201ENSMUST00000068143 210 ntBASIC1.6□□□□□ -2.15
Trim11Q99PQ2 Mir30a-201ENSMUST00000083471 71 ntBASIC1.6□□□□□ -2.15
Trim11Q99PQ2 Gm44483-201ENSMUST00000197203 97 ntBASIC1.59□□□□□ -2.15
Trim11Q99PQ2 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.59□□□□□ -2.16
Trim11Q99PQ2 Gm23130-201ENSMUST00000104252 74 ntBASIC1.58□□□□□ -2.16
Trim11Q99PQ2 Mir669h-201ENSMUST00000116944 125 ntBASIC1.58□□□□□ -2.16
Trim11Q99PQ2 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.58□□□□□ -2.16
Trim11Q99PQ2 Mir100-201ENSMUST00000175270 80 ntBASIC1.58□□□□□ -2.16
Trim11Q99PQ2 Mir7014-201ENSMUST00000183853 63 ntBASIC1.58□□□□□ -2.16
Trim11Q99PQ2 Gm22459-201ENSMUST00000082577 108 ntBASIC1.58□□□□□ -2.16
Trim11Q99PQ2 Gm23012-201ENSMUST00000104149 83 ntBASIC1.57□□□□□ -2.16
Trim11Q99PQ2 Gm16399-201ENSMUST00000181423 219 ntBASIC1.57□□□□□ -2.16
Trim11Q99PQ2 Mir6342-201ENSMUST00000183870 125 ntBASIC1.57□□□□□ -2.16
Trim11Q99PQ2 Mir7673-201ENSMUST00000184567 64 ntBASIC1.57□□□□□ -2.16
Trim11Q99PQ2 Gm22652-201ENSMUST00000083207 131 ntBASIC1.57□□□□□ -2.16
Trim11Q99PQ2 Gm23708-201ENSMUST00000104367 123 ntBASIC1.56□□□□□ -2.16
Trim11Q99PQ2 Gm27717-201ENSMUST00000183933 151 ntBASIC1.56□□□□□ -2.16
Trim11Q99PQ2 Gm27493-201ENSMUST00000184128 78 ntBASIC1.56□□□□□ -2.16
Trim11Q99PQ2 Snord95-201ENSMUST00000082846 68 ntBASIC1.56□□□□□ -2.16
Trim11Q99PQ2 Gm27420-201ENSMUST00000183823 79 ntBASIC1.55□□□□□ -2.16
Trim11Q99PQ2 Gm42677-201ENSMUST00000196363 127 ntBASIC1.55□□□□□ -2.16
Trim11Q99PQ2 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.55□□□□□ -2.16
Trim11Q99PQ2 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.55□□□□□ -2.16
Trim11Q99PQ2 Gm25495-201ENSMUST00000104431 131 ntBASIC1.54□□□□□ -2.16
Trim11Q99PQ2 Gm13065-201ENSMUST00000119178 141 ntBASIC1.54□□□□□ -2.16
Trim11Q99PQ2 Gm23122-201ENSMUST00000157645 103 ntBASIC1.54□□□□□ -2.16
Trim11Q99PQ2 Gm25440-201ENSMUST00000158279 154 ntBASIC1.54□□□□□ -2.16
Trim11Q99PQ2 Mir1949-202ENSMUST00000199259 70 ntBASIC1.54□□□□□ -2.16
Trim11Q99PQ2 Gm26438-201ENSMUST00000082593 107 ntBASIC1.54□□□□□ -2.16
Trim11Q99PQ2 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Trim11Q99PQ2 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.52□□□□□ -2.17
Trim11Q99PQ2 Gm26375-201ENSMUST00000101829 106 ntBASIC1.51□□□□□ -2.17
Trim11Q99PQ2 Gm6272-201ENSMUST00000121256 171 ntBASIC1.51□□□□□ -2.17
Trim11Q99PQ2 Gm38323-201ENSMUST00000192450 210 ntBASIC1.51□□□□□ -2.17
Trim11Q99PQ2 Mir500-201ENSMUST00000093600 92 ntBASIC1.51□□□□□ -2.17
Trim11Q99PQ2 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.51□□□□□ -2.17
Trim11Q99PQ2 Gm25968-201ENSMUST00000157167 100 ntBASIC1.5□□□□□ -2.17
Trim11Q99PQ2 Gm23590-201ENSMUST00000157661 104 ntBASIC1.5□□□□□ -2.17
Trim11Q99PQ2 Gm25831-201ENSMUST00000158924 163 ntBASIC1.5□□□□□ -2.17
Trim11Q99PQ2 Mir7225-201ENSMUST00000184178 54 ntBASIC1.5□□□□□ -2.17
Trim11Q99PQ2 Mir7118-201ENSMUST00000197760 61 ntBASIC1.5□□□□□ -2.17
Trim11Q99PQ2 Gm24271-201ENSMUST00000102327 111 ntBASIC1.49□□□□□ -2.17
Trim11Q99PQ2 Gm24233-201ENSMUST00000104317 122 ntBASIC1.49□□□□□ -2.17
Trim11Q99PQ2 Gm22559-201ENSMUST00000157329 134 ntBASIC1.49□□□□□ -2.17
Trim11Q99PQ2 Gm22551-201ENSMUST00000157795 103 ntBASIC1.49□□□□□ -2.17
Trim11Q99PQ2 Gm22556-201ENSMUST00000157803 100 ntBASIC1.49□□□□□ -2.17
Trim11Q99PQ2 Gm24996-201ENSMUST00000158390 99 ntBASIC1.49□□□□□ -2.17
Trim11Q99PQ2 Gm25656-201ENSMUST00000158466 66 ntBASIC1.49□□□□□ -2.17
Trim11Q99PQ2 Gm26491-201ENSMUST00000179268 121 ntBASIC1.49□□□□□ -2.17
Trim11Q99PQ2 Mir3071-201ENSMUST00000093621 80 ntBASIC1.49□□□□□ -2.17
Trim11Q99PQ2 Gm14533-201ENSMUST00000117088 93 ntBASIC1.48□□□□□ -2.17
Trim11Q99PQ2 Gm25010-201ENSMUST00000158403 65 ntBASIC1.48□□□□□ -2.17
Trim11Q99PQ2 Gm26224-201ENSMUST00000082506 80 ntBASIC1.48□□□□□ -2.17
Trim11Q99PQ2 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Trim11Q99PQ2 Gm24070-201ENSMUST00000104519 130 ntBASIC1.47□□□□□ -2.17
Trim11Q99PQ2 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trim11Q99PQ2 Gm24400-201ENSMUST00000157865 107 ntBASIC1.47□□□□□ -2.17
Trim11Q99PQ2 Gm27711-201ENSMUST00000183802 118 ntBASIC1.47□□□□□ -2.17
Trim11Q99PQ2 Gm24902-201ENSMUST00000158126 123 ntBASIC1.46□□□□□ -2.18
Trim11Q99PQ2 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trim11Q99PQ2 Gm24808-201ENSMUST00000157993 118 ntBASIC1.45□□□□□ -2.18
Trim11Q99PQ2 Gm24638-201ENSMUST00000179807 132 ntBASIC1.45□□□□□ -2.18
Trim11Q99PQ2 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms