Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm23410-201ENSMUST00000179967 107 ntBASIC1.5□□□□□ -2.17
Chmp7Q8R1T1 Gm22505-201ENSMUST00000082956 108 ntBASIC1.5□□□□□ -2.17
Chmp7Q8R1T1 Gm22363-201ENSMUST00000083100 108 ntBASIC1.5□□□□□ -2.17
Chmp7Q8R1T1 Gm23814-201ENSMUST00000083230 102 ntBASIC1.5□□□□□ -2.17
Chmp7Q8R1T1 Mir448-201ENSMUST00000083516 112 ntBASIC1.5□□□□□ -2.17
Chmp7Q8R1T1 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Chmp7Q8R1T1 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Chmp7Q8R1T1 Gm24983-201ENSMUST00000104457 69 ntBASIC1.49□□□□□ -2.17
Chmp7Q8R1T1 Gm24500-201ENSMUST00000158447 124 ntBASIC1.49□□□□□ -2.17
Chmp7Q8R1T1 Gm25366-201ENSMUST00000158845 124 ntBASIC1.49□□□□□ -2.17
Chmp7Q8R1T1 Gm27265-201ENSMUST00000183559 77 ntBASIC1.49□□□□□ -2.17
Chmp7Q8R1T1 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.49□□□□□ -2.17
Chmp7Q8R1T1 Gm22540-201ENSMUST00000158168 117 ntBASIC1.48□□□□□ -2.17
Chmp7Q8R1T1 Mir3079-201ENSMUST00000175428 90 ntBASIC1.48□□□□□ -2.17
Chmp7Q8R1T1 Mir6342-201ENSMUST00000183870 125 ntBASIC1.48□□□□□ -2.17
Chmp7Q8R1T1 Gm23060-201ENSMUST00000102345 109 ntBASIC1.47□□□□□ -2.17
Chmp7Q8R1T1 Gm24865-201ENSMUST00000103246 96 ntBASIC1.47□□□□□ -2.17
Chmp7Q8R1T1 Gm23853-201ENSMUST00000158375 104 ntBASIC1.47□□□□□ -2.17
Chmp7Q8R1T1 Gm25715-201ENSMUST00000158627 125 ntBASIC1.47□□□□□ -2.17
Chmp7Q8R1T1 Gm42533-201ENSMUST00000196247 157 ntBASIC1.47□□□□□ -2.17
Chmp7Q8R1T1 Gm44483-201ENSMUST00000197203 97 ntBASIC1.47□□□□□ -2.17
Chmp7Q8R1T1 Snord71-201ENSMUST00000104361 85 ntBASIC1.46□□□□□ -2.18
Chmp7Q8R1T1 Gm11857-201ENSMUST00000119817 324 ntBASIC1.46□□□□□ -2.18
Chmp7Q8R1T1 Gm6985-201ENSMUST00000121255 271 ntBASIC1.46□□□□□ -2.18
Chmp7Q8R1T1 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.46□□□□□ -2.18
Chmp7Q8R1T1 Mir7663-201ENSMUST00000183950 61 ntBASIC1.46□□□□□ -2.18
Chmp7Q8R1T1 Mir376b-201ENSMUST00000195930 82 ntBASIC1.46□□□□□ -2.18
Chmp7Q8R1T1 Mir1949-202ENSMUST00000199259 70 ntBASIC1.46□□□□□ -2.18
Chmp7Q8R1T1 Gm22980-201ENSMUST00000082608 70 ntBASIC1.46□□□□□ -2.18
Chmp7Q8R1T1 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Chmp7Q8R1T1 Gm25495-201ENSMUST00000104431 131 ntBASIC1.45□□□□□ -2.18
Chmp7Q8R1T1 Gm23989-201ENSMUST00000117030 66 ntBASIC1.45□□□□□ -2.18
Chmp7Q8R1T1 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.45□□□□□ -2.18
Chmp7Q8R1T1 Gm23570-201ENSMUST00000083029 104 ntBASIC1.45□□□□□ -2.18
Chmp7Q8R1T1 Gm24988-201ENSMUST00000104460 121 ntBASIC1.44□□□□□ -2.18
Chmp7Q8R1T1 Gm25964-201ENSMUST00000157171 97 ntBASIC1.44□□□□□ -2.18
Chmp7Q8R1T1 Gm22100-201ENSMUST00000157926 63 ntBASIC1.44□□□□□ -2.18
Chmp7Q8R1T1 Gm24073-201ENSMUST00000158177 106 ntBASIC1.44□□□□□ -2.18
Chmp7Q8R1T1 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.44□□□□□ -2.18
Chmp7Q8R1T1 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Chmp7Q8R1T1 Gm22203-201ENSMUST00000158605 58 ntBASIC1.43□□□□□ -2.18
Chmp7Q8R1T1 Mir6394-201ENSMUST00000184738 99 ntBASIC1.43□□□□□ -2.18
Chmp7Q8R1T1 Snord2-201ENSMUST00000157899 69 ntBASIC1.42□□□□□ -2.18
Chmp7Q8R1T1 Gm25160-201ENSMUST00000158914 102 ntBASIC1.42□□□□□ -2.18
Chmp7Q8R1T1 Gm26499-201ENSMUST00000178544 79 ntBASIC1.42□□□□□ -2.18
Chmp7Q8R1T1 Gm26096-201ENSMUST00000179084 79 ntBASIC1.42□□□□□ -2.18
Chmp7Q8R1T1 Gm25609-201ENSMUST00000104019 104 ntBASIC1.41□□□□□ -2.18
Chmp7Q8R1T1 Gm11333-201ENSMUST00000119479 148 ntBASIC1.41□□□□□ -2.18
Chmp7Q8R1T1 Gm25619-201ENSMUST00000122621 104 ntBASIC1.41□□□□□ -2.18
Chmp7Q8R1T1 Gm26359-201ENSMUST00000158873 101 ntBASIC1.41□□□□□ -2.18
Chmp7Q8R1T1 Gm24495-201ENSMUST00000178575 79 ntBASIC1.41□□□□□ -2.18
Chmp7Q8R1T1 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Chmp7Q8R1T1 Gm22253-201ENSMUST00000179870 79 ntBASIC1.41□□□□□ -2.18
Chmp7Q8R1T1 Gm27711-201ENSMUST00000183802 118 ntBASIC1.41□□□□□ -2.18
Chmp7Q8R1T1 Gm42506-201ENSMUST00000202009 150 ntBASIC1.41□□□□□ -2.18
Chmp7Q8R1T1 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Chmp7Q8R1T1 Gm25991-201ENSMUST00000102439 99 ntBASIC1.4□□□□□ -2.19
Chmp7Q8R1T1 Gm22406-201ENSMUST00000174923 93 ntBASIC1.4□□□□□ -2.19
Chmp7Q8R1T1 Mir6381-201ENSMUST00000183426 87 ntBASIC1.4□□□□□ -2.19
Chmp7Q8R1T1 Gm13065-201ENSMUST00000119178 141 ntBASIC1.39□□□□□ -2.19
Chmp7Q8R1T1 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.38□□□□□ -2.19
Chmp7Q8R1T1 Gm25506-201ENSMUST00000104339 70 ntBASIC1.38□□□□□ -2.19
Chmp7Q8R1T1 Gm23708-201ENSMUST00000104367 123 ntBASIC1.38□□□□□ -2.19
Chmp7Q8R1T1 Gm22067-201ENSMUST00000122790 107 ntBASIC1.38□□□□□ -2.19
Chmp7Q8R1T1 Gm22485-201ENSMUST00000157990 109 ntBASIC1.38□□□□□ -2.19
Chmp7Q8R1T1 Gm24221-201ENSMUST00000158833 313 ntBASIC1.38□□□□□ -2.19
Chmp7Q8R1T1 Mir15a-201ENSMUST00000175266 84 ntBASIC1.38□□□□□ -2.19
Chmp7Q8R1T1 Gm22565-201ENSMUST00000175540 69 ntBASIC1.38□□□□□ -2.19
Chmp7Q8R1T1 Gm44211-201ENSMUST00000204867 145 ntBASIC1.38□□□□□ -2.19
Chmp7Q8R1T1 Gm22652-201ENSMUST00000083207 131 ntBASIC1.38□□□□□ -2.19
Chmp7Q8R1T1 Gm22559-201ENSMUST00000157329 134 ntBASIC1.37□□□□□ -2.19
Chmp7Q8R1T1 Gm27717-201ENSMUST00000183933 151 ntBASIC1.37□□□□□ -2.19
Chmp7Q8R1T1 Gm23376-201ENSMUST00000082938 160 ntBASIC1.37□□□□□ -2.19
Chmp7Q8R1T1 Gm24233-201ENSMUST00000104317 122 ntBASIC1.36□□□□□ -2.19
Chmp7Q8R1T1 Gm22520-201ENSMUST00000158269 129 ntBASIC1.36□□□□□ -2.19
Chmp7Q8R1T1 Gm22663-201ENSMUST00000158721 102 ntBASIC1.36□□□□□ -2.19
Chmp7Q8R1T1 Mir6985-201ENSMUST00000184641 61 ntBASIC1.36□□□□□ -2.19
Chmp7Q8R1T1 Gm23245-201ENSMUST00000083370 135 ntBASIC1.36□□□□□ -2.19
Chmp7Q8R1T1 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
Chmp7Q8R1T1 Gm23500-201ENSMUST00000157735 98 ntBASIC1.35□□□□□ -2.19
Chmp7Q8R1T1 Gm22413-201ENSMUST00000175465 85 ntBASIC1.35□□□□□ -2.19
Chmp7Q8R1T1 Gm25138-201ENSMUST00000083248 136 ntBASIC1.35□□□□□ -2.19
Chmp7Q8R1T1 Mir22-201ENSMUST00000083595 95 ntBASIC1.35□□□□□ -2.19
Chmp7Q8R1T1 Gm25300-201ENSMUST00000175284 84 ntBASIC1.34□□□□□ -2.19
Chmp7Q8R1T1 Gm23416-201ENSMUST00000175520 95 ntBASIC1.34□□□□□ -2.19
Chmp7Q8R1T1 Gm44458-201ENSMUST00000196594 143 ntBASIC1.34□□□□□ -2.19
Chmp7Q8R1T1 Gm22074-201ENSMUST00000158595 113 ntBASIC1.33□□□□□ -2.2
Chmp7Q8R1T1 Gm25166-201ENSMUST00000158909 111 ntBASIC1.33□□□□□ -2.2
Chmp7Q8R1T1 Mir7010-201ENSMUST00000183464 63 ntBASIC1.33□□□□□ -2.2
Chmp7Q8R1T1 Mir27b-201ENSMUST00000083541 73 ntBASIC1.33□□□□□ -2.2
Chmp7Q8R1T1 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Chmp7Q8R1T1 Gm23893-201ENSMUST00000158106 134 ntBASIC1.32□□□□□ -2.2
Chmp7Q8R1T1 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.32□□□□□ -2.2
Chmp7Q8R1T1 Mir33-201ENSMUST00000083531 69 ntBASIC1.32□□□□□ -2.2
Chmp7Q8R1T1 Gm25756-201ENSMUST00000103990 136 ntBASIC1.31□□□□□ -2.2
Chmp7Q8R1T1 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.31□□□□□ -2.2
Chmp7Q8R1T1 Gm27974-201ENSMUST00000183415 105 ntBASIC1.31□□□□□ -2.2
Chmp7Q8R1T1 Mir126a-201ENSMUST00000083606 73 ntBASIC1.31□□□□□ -2.2
Chmp7Q8R1T1 Gm24342-201ENSMUST00000103907 104 ntBASIC1.3□□□□□ -2.2
Chmp7Q8R1T1 Gm24580-201ENSMUST00000103965 131 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms