Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mir670-201ENSMUST00000102380 100 ntBASIC0.42□□□□□ -2.34
Ubfd1Q78JW9 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.42□□□□□ -2.34
Ubfd1Q78JW9 Gm25337-201ENSMUST00000083723 104 ntBASIC0.42□□□□□ -2.34
Ubfd1Q78JW9 Gm22828-201ENSMUST00000083768 107 ntBASIC0.42□□□□□ -2.34
Ubfd1Q78JW9 Gm23180-201ENSMUST00000158686 125 ntBASIC0.41□□□□□ -2.34
Ubfd1Q78JW9 Gm23291-201ENSMUST00000175611 78 ntBASIC0.41□□□□□ -2.34
Ubfd1Q78JW9 Gm43432-201ENSMUST00000196352 121 ntBASIC0.41□□□□□ -2.34
Ubfd1Q78JW9 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.41□□□□□ -2.34
Ubfd1Q78JW9 Gm22759-201ENSMUST00000102276 96 ntBASIC0.4□□□□□ -2.35
Ubfd1Q78JW9 Gm26303-201ENSMUST00000116845 119 ntBASIC0.4□□□□□ -2.35
Ubfd1Q78JW9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.4□□□□□ -2.35
Ubfd1Q78JW9 Mir1197-201ENSMUST00000117037 120 ntBASIC0.39□□□□□ -2.35
Ubfd1Q78JW9 Gm25366-201ENSMUST00000158845 124 ntBASIC0.39□□□□□ -2.35
Ubfd1Q78JW9 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.39□□□□□ -2.35
Ubfd1Q78JW9 Gm44327-201ENSMUST00000200068 117 ntBASIC0.39□□□□□ -2.35
Ubfd1Q78JW9 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Ubfd1Q78JW9 mt-Tn-201ENSMUST00000082399 71 ntBASIC0.39□□□□□ -2.35
Ubfd1Q78JW9 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.39□□□□□ -2.35
Ubfd1Q78JW9 Mir29a-201ENSMUST00000083676 88 ntBASIC0.39□□□□□ -2.35
Ubfd1Q78JW9 Gm25408-201ENSMUST00000104104 133 ntBASIC0.38□□□□□ -2.35
Ubfd1Q78JW9 Gm23531-201ENSMUST00000104567 68 ntBASIC0.38□□□□□ -2.35
Ubfd1Q78JW9 Gm26712-201ENSMUST00000180813 217 ntBASIC0.38□□□□□ -2.35
Ubfd1Q78JW9 Mir7077-201ENSMUST00000183991 57 ntBASIC0.38□□□□□ -2.35
Ubfd1Q78JW9 AC140930.2-201ENSMUST00000221803 109 ntBASIC0.38□□□□□ -2.35
Ubfd1Q78JW9 Gm26054-201ENSMUST00000083037 107 ntBASIC0.38□□□□□ -2.35
Ubfd1Q78JW9 Gm24492-201ENSMUST00000083798 107 ntBASIC0.38□□□□□ -2.35
Ubfd1Q78JW9 Gm26109-201ENSMUST00000083970 70 ntBASIC0.38□□□□□ -2.35
Ubfd1Q78JW9 Gm26478-201ENSMUST00000122611 133 ntBASIC0.37□□□□□ -2.35
Ubfd1Q78JW9 Snord2-201ENSMUST00000157899 69 ntBASIC0.37□□□□□ -2.35
Ubfd1Q78JW9 Gm23012-201ENSMUST00000104149 83 ntBASIC0.36□□□□□ -2.35
Ubfd1Q78JW9 Gm23994-201ENSMUST00000158059 88 ntBASIC0.36□□□□□ -2.35
Ubfd1Q78JW9 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.36□□□□□ -2.35
Ubfd1Q78JW9 Gm26116-201ENSMUST00000175600 77 ntBASIC0.36□□□□□ -2.35
Ubfd1Q78JW9 Gm27475-201ENSMUST00000183420 61 ntBASIC0.36□□□□□ -2.35
Ubfd1Q78JW9 Mir6237-201ENSMUST00000183808 91 ntBASIC0.36□□□□□ -2.35
Ubfd1Q78JW9 Mir7065-201ENSMUST00000185110 61 ntBASIC0.36□□□□□ -2.35
Ubfd1Q78JW9 Mir669f-201ENSMUST00000103850 121 ntBASIC0.35□□□□□ -2.35
Ubfd1Q78JW9 Gm25497-201ENSMUST00000104425 132 ntBASIC0.35□□□□□ -2.35
Ubfd1Q78JW9 Mir509-201ENSMUST00000196089 75 ntBASIC0.35□□□□□ -2.35
Ubfd1Q78JW9 mt-Tv-201ENSMUST00000082389 69 ntBASIC0.35□□□□□ -2.35
Ubfd1Q78JW9 Mir224-201ENSMUST00000083608 82 ntBASIC0.35□□□□□ -2.35
Ubfd1Q78JW9 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.35□□□□□ -2.35
Ubfd1Q78JW9 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.34□□□□□ -2.36
Ubfd1Q78JW9 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.34□□□□□ -2.36
Ubfd1Q78JW9 Gm22100-201ENSMUST00000157926 63 ntBASIC0.33□□□□□ -2.36
Ubfd1Q78JW9 AC157602.1-201ENSMUST00000197446 105 ntBASIC0.33□□□□□ -2.36
Ubfd1Q78JW9 Gm42845-201ENSMUST00000197766 105 ntBASIC0.33□□□□□ -2.36
Ubfd1Q78JW9 Gm24148-201ENSMUST00000082762 80 ntBASIC0.33□□□□□ -2.36
Ubfd1Q78JW9 Gm24467-201ENSMUST00000157887 126 ntBASIC0.32□□□□□ -2.36
Ubfd1Q78JW9 Gm23278-201ENSMUST00000157911 143 ntBASIC0.32□□□□□ -2.36
Ubfd1Q78JW9 Scarna8-201ENSMUST00000158333 131 ntBASIC0.32□□□□□ -2.36
Ubfd1Q78JW9 Gm22088-201ENSMUST00000158341 117 ntBASIC0.32□□□□□ -2.36
Ubfd1Q78JW9 Mir6896-201ENSMUST00000198033 73 ntBASIC0.32□□□□□ -2.36
Ubfd1Q78JW9 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC0.32□□□□□ -2.36
Ubfd1Q78JW9 Gm23969-201ENSMUST00000083324 74 ntBASIC0.31□□□□□ -2.36
Ubfd1Q78JW9 Gm24202-201ENSMUST00000082948 103 ntBASIC0.3□□□□□ -2.36
Ubfd1Q78JW9 Mir710-201ENSMUST00000102088 110 ntBASIC0.29□□□□□ -2.36
Ubfd1Q78JW9 Gm44345-201ENSMUST00000199560 135 ntBASIC0.29□□□□□ -2.36
Ubfd1Q78JW9 AC132833.2-201ENSMUST00000228699 157 ntBASIC0.29□□□□□ -2.36
Ubfd1Q78JW9 Gm25756-201ENSMUST00000103990 136 ntBASIC0.28□□□□□ -2.36
Ubfd1Q78JW9 Gm26152-201ENSMUST00000157427 101 ntBASIC0.28□□□□□ -2.36
Ubfd1Q78JW9 Gm44803-201ENSMUST00000204384 156 ntBASIC0.28□□□□□ -2.36
Ubfd1Q78JW9 AC166341.8-201ENSMUST00000221267 108 ntBASIC0.28□□□□□ -2.36
Ubfd1Q78JW9 Mir18-201ENSMUST00000083469 96 ntBASIC0.28□□□□□ -2.36
Ubfd1Q78JW9 Gm24833-201ENSMUST00000116775 120 ntBASIC0.27□□□□□ -2.37
Ubfd1Q78JW9 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.27□□□□□ -2.37
Ubfd1Q78JW9 Gm22004-201ENSMUST00000101884 107 ntBASIC0.26□□□□□ -2.37
Ubfd1Q78JW9 Gm24586-201ENSMUST00000116695 89 ntBASIC0.26□□□□□ -2.37
Ubfd1Q78JW9 Gm24801-201ENSMUST00000178503 105 ntBASIC0.26□□□□□ -2.37
Ubfd1Q78JW9 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC0.26□□□□□ -2.37
Ubfd1Q78JW9 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.26□□□□□ -2.37
Ubfd1Q78JW9 Gm26456-201ENSMUST00000082831 111 ntBASIC0.26□□□□□ -2.37
Ubfd1Q78JW9 Snord95-201ENSMUST00000082846 68 ntBASIC0.26□□□□□ -2.37
Ubfd1Q78JW9 Gm24234-201ENSMUST00000104316 107 ntBASIC0.25□□□□□ -2.37
Ubfd1Q78JW9 Gm28001-201ENSMUST00000183561 117 ntBASIC0.25□□□□□ -2.37
Ubfd1Q78JW9 Gm24697-201ENSMUST00000083881 107 ntBASIC0.25□□□□□ -2.37
Ubfd1Q78JW9 Gm24983-201ENSMUST00000104457 69 ntBASIC0.24□□□□□ -2.37
Ubfd1Q78JW9 Mir3108-201ENSMUST00000175500 79 ntBASIC0.24□□□□□ -2.37
Ubfd1Q78JW9 Gm22048-201ENSMUST00000104721 89 ntBASIC0.23□□□□□ -2.37
Ubfd1Q78JW9 Gm22213-201ENSMUST00000157564 119 ntBASIC0.23□□□□□ -2.37
Ubfd1Q78JW9 Gm24884-201ENSMUST00000158784 119 ntBASIC0.23□□□□□ -2.37
Ubfd1Q78JW9 Gm22406-201ENSMUST00000174923 93 ntBASIC0.23□□□□□ -2.37
Ubfd1Q78JW9 Gm22981-201ENSMUST00000082611 75 ntBASIC0.23□□□□□ -2.37
Ubfd1Q78JW9 Gm24877-201ENSMUST00000158779 116 ntBASIC0.22□□□□□ -2.37
Ubfd1Q78JW9 Mir6365-201ENSMUST00000183990 101 ntBASIC0.22□□□□□ -2.37
Ubfd1Q78JW9 Gm25160-201ENSMUST00000158914 102 ntBASIC0.21□□□□□ -2.38
Ubfd1Q78JW9 Mir3089-201ENSMUST00000175350 84 ntBASIC0.21□□□□□ -2.38
Ubfd1Q78JW9 Gm25815-201ENSMUST00000082755 107 ntBASIC0.21□□□□□ -2.38
Ubfd1Q78JW9 Gm22672-201ENSMUST00000104414 134 ntBASIC0.2□□□□□ -2.38
Ubfd1Q78JW9 Gm25885-201ENSMUST00000157779 109 ntBASIC0.2□□□□□ -2.38
Ubfd1Q78JW9 Gm22203-201ENSMUST00000158605 58 ntBASIC0.2□□□□□ -2.38
Ubfd1Q78JW9 Gm29047-201ENSMUST00000189816 108 ntBASIC0.2□□□□□ -2.38
Ubfd1Q78JW9 Gm23644-201ENSMUST00000157856 77 ntBASIC0.19□□□□□ -2.38
Ubfd1Q78JW9 Gm25656-201ENSMUST00000158466 66 ntBASIC0.19□□□□□ -2.38
Ubfd1Q78JW9 Gm23821-201ENSMUST00000158738 106 ntBASIC0.19□□□□□ -2.38
Ubfd1Q78JW9 Gm23020-201ENSMUST00000158766 253 ntBASIC0.19□□□□□ -2.38
Ubfd1Q78JW9 Gm26438-201ENSMUST00000082593 107 ntBASIC0.19□□□□□ -2.38
Ubfd1Q78JW9 AC154506.4-201ENSMUST00000224898 3416 ntBASIC0.18□□□□□ -2.38
Ubfd1Q78JW9 Gm24099-201ENSMUST00000083384 107 ntBASIC0.18□□□□□ -2.38
Ubfd1Q78JW9 Mir141-201ENSMUST00000083540 72 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 150.3 ms