Protein–RNA interactions for Protein: Q6A0D4

Rftn1, Raftlin, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn1Q6A0D4 Gm12432-201ENSMUST00000119540 186 ntBASIC1.52□□□□□ -2.17
Rftn1Q6A0D4 Gm24073-201ENSMUST00000158177 106 ntBASIC1.52□□□□□ -2.17
Rftn1Q6A0D4 Gm22406-201ENSMUST00000174923 93 ntBASIC1.52□□□□□ -2.17
Rftn1Q6A0D4 Mir100-201ENSMUST00000175270 80 ntBASIC1.52□□□□□ -2.17
Rftn1Q6A0D4 Gm6272-201ENSMUST00000121256 171 ntBASIC1.51□□□□□ -2.17
Rftn1Q6A0D4 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.51□□□□□ -2.17
Rftn1Q6A0D4 Gm24154-201ENSMUST00000175261 130 ntBASIC1.51□□□□□ -2.17
Rftn1Q6A0D4 Mir7059-201ENSMUST00000184825 59 ntBASIC1.51□□□□□ -2.17
Rftn1Q6A0D4 Gm24311-201ENSMUST00000082570 104 ntBASIC1.51□□□□□ -2.17
Rftn1Q6A0D4 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Rftn1Q6A0D4 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Rftn1Q6A0D4 Gm25759-201ENSMUST00000103988 129 ntBASIC1.5□□□□□ -2.17
Rftn1Q6A0D4 Gm26485-201ENSMUST00000158019 64 ntBASIC1.5□□□□□ -2.17
Rftn1Q6A0D4 Gm22203-201ENSMUST00000158605 58 ntBASIC1.5□□□□□ -2.17
Rftn1Q6A0D4 Mir376b-201ENSMUST00000195930 82 ntBASIC1.5□□□□□ -2.17
Rftn1Q6A0D4 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Rftn1Q6A0D4 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Rftn1Q6A0D4 Gm23329-201ENSMUST00000157415 108 ntBASIC1.49□□□□□ -2.17
Rftn1Q6A0D4 Snord2-201ENSMUST00000157899 69 ntBASIC1.49□□□□□ -2.17
Rftn1Q6A0D4 Gm24174-201ENSMUST00000158933 111 ntBASIC1.49□□□□□ -2.17
Rftn1Q6A0D4 Mir6342-201ENSMUST00000183870 125 ntBASIC1.49□□□□□ -2.17
Rftn1Q6A0D4 Gm27493-201ENSMUST00000184128 78 ntBASIC1.49□□□□□ -2.17
Rftn1Q6A0D4 Gm25756-201ENSMUST00000103990 136 ntBASIC1.48□□□□□ -2.17
Rftn1Q6A0D4 Gm23785-201ENSMUST00000116741 96 ntBASIC1.48□□□□□ -2.17
Rftn1Q6A0D4 Gm23726-201ENSMUST00000178937 67 ntBASIC1.48□□□□□ -2.17
Rftn1Q6A0D4 Gm44962-201ENSMUST00000206460 279 ntBASIC1.48□□□□□ -2.17
Rftn1Q6A0D4 Gm26301-201ENSMUST00000104813 95 ntBASIC1.47□□□□□ -2.17
Rftn1Q6A0D4 Gm11966-201ENSMUST00000119907 87 ntBASIC1.47□□□□□ -2.17
Rftn1Q6A0D4 Gm23500-201ENSMUST00000157735 98 ntBASIC1.47□□□□□ -2.17
Rftn1Q6A0D4 Mir7052-201ENSMUST00000184821 65 ntBASIC1.47□□□□□ -2.17
Rftn1Q6A0D4 Mir1949-202ENSMUST00000199259 70 ntBASIC1.47□□□□□ -2.17
Rftn1Q6A0D4 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.47□□□□□ -2.17
Rftn1Q6A0D4 Gm25170-201ENSMUST00000104191 129 ntBASIC1.46□□□□□ -2.18
Rftn1Q6A0D4 Gm22233-201ENSMUST00000157464 114 ntBASIC1.46□□□□□ -2.18
Rftn1Q6A0D4 Gm25868-201ENSMUST00000158253 114 ntBASIC1.46□□□□□ -2.18
Rftn1Q6A0D4 Gm24134-201ENSMUST00000083361 71 ntBASIC1.46□□□□□ -2.18
Rftn1Q6A0D4 Mir126a-201ENSMUST00000083606 73 ntBASIC1.46□□□□□ -2.18
Rftn1Q6A0D4 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Rftn1Q6A0D4 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Rftn1Q6A0D4 Gm24378-201ENSMUST00000122699 106 ntBASIC1.45□□□□□ -2.18
Rftn1Q6A0D4 Mir3079-201ENSMUST00000175428 90 ntBASIC1.45□□□□□ -2.18
Rftn1Q6A0D4 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Rftn1Q6A0D4 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Rftn1Q6A0D4 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Rftn1Q6A0D4 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.44□□□□□ -2.18
Rftn1Q6A0D4 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Rftn1Q6A0D4 Gm13065-201ENSMUST00000119178 141 ntBASIC1.43□□□□□ -2.18
Rftn1Q6A0D4 Gm11857-201ENSMUST00000119817 324 ntBASIC1.43□□□□□ -2.18
Rftn1Q6A0D4 Gm23853-201ENSMUST00000158375 104 ntBASIC1.43□□□□□ -2.18
Rftn1Q6A0D4 Gm24500-201ENSMUST00000158447 124 ntBASIC1.43□□□□□ -2.18
Rftn1Q6A0D4 Gm23410-201ENSMUST00000179967 107 ntBASIC1.43□□□□□ -2.18
Rftn1Q6A0D4 Gm22505-201ENSMUST00000082956 108 ntBASIC1.43□□□□□ -2.18
Rftn1Q6A0D4 Gm22363-201ENSMUST00000083100 108 ntBASIC1.43□□□□□ -2.18
Rftn1Q6A0D4 Gm22652-201ENSMUST00000083207 131 ntBASIC1.43□□□□□ -2.18
Rftn1Q6A0D4 Gm23814-201ENSMUST00000083230 102 ntBASIC1.43□□□□□ -2.18
Rftn1Q6A0D4 Gm25128-201ENSMUST00000083339 76 ntBASIC1.43□□□□□ -2.18
Rftn1Q6A0D4 Gm22780-201ENSMUST00000104084 132 ntBASIC1.42□□□□□ -2.18
Rftn1Q6A0D4 Gm23989-201ENSMUST00000117030 66 ntBASIC1.42□□□□□ -2.18
Rftn1Q6A0D4 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.42□□□□□ -2.18
Rftn1Q6A0D4 Gm23477-201ENSMUST00000158882 128 ntBASIC1.42□□□□□ -2.18
Rftn1Q6A0D4 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.42□□□□□ -2.18
Rftn1Q6A0D4 Mir3064-201ENSMUST00000175532 67 ntBASIC1.42□□□□□ -2.18
Rftn1Q6A0D4 Mir1954-201ENSMUST00000175595 86 ntBASIC1.42□□□□□ -2.18
Rftn1Q6A0D4 Gm27717-201ENSMUST00000183933 151 ntBASIC1.42□□□□□ -2.18
Rftn1Q6A0D4 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.42□□□□□ -2.18
Rftn1Q6A0D4 Gm24624-201ENSMUST00000082617 164 ntBASIC1.42□□□□□ -2.18
Rftn1Q6A0D4 Gm23708-201ENSMUST00000104367 123 ntBASIC1.4□□□□□ -2.19
Rftn1Q6A0D4 Gm23328-201ENSMUST00000157418 132 ntBASIC1.4□□□□□ -2.19
Rftn1Q6A0D4 Gm23221-201ENSMUST00000158118 93 ntBASIC1.4□□□□□ -2.19
Rftn1Q6A0D4 Gm42533-201ENSMUST00000196247 157 ntBASIC1.4□□□□□ -2.19
Rftn1Q6A0D4 Mir741-201ENSMUST00000103931 71 ntBASIC1.39□□□□□ -2.19
Rftn1Q6A0D4 Gm24895-201ENSMUST00000122742 74 ntBASIC1.39□□□□□ -2.19
Rftn1Q6A0D4 Gm23636-201ENSMUST00000175070 95 ntBASIC1.39□□□□□ -2.19
Rftn1Q6A0D4 Gm27656-201ENSMUST00000185055 80 ntBASIC1.39□□□□□ -2.19
Rftn1Q6A0D4 Mir448-201ENSMUST00000083516 112 ntBASIC1.39□□□□□ -2.19
Rftn1Q6A0D4 Gm24252-201ENSMUST00000083700 132 ntBASIC1.39□□□□□ -2.19
Rftn1Q6A0D4 Gm24580-201ENSMUST00000103965 131 ntBASIC1.38□□□□□ -2.19
Rftn1Q6A0D4 Gm24233-201ENSMUST00000104317 122 ntBASIC1.38□□□□□ -2.19
Rftn1Q6A0D4 Gm22048-201ENSMUST00000104721 89 ntBASIC1.38□□□□□ -2.19
Rftn1Q6A0D4 Gm25328-201ENSMUST00000175013 107 ntBASIC1.38□□□□□ -2.19
Rftn1Q6A0D4 Gm27549-201ENSMUST00000183508 62 ntBASIC1.38□□□□□ -2.19
Rftn1Q6A0D4 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.37□□□□□ -2.19
Rftn1Q6A0D4 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Rftn1Q6A0D4 Gm44490-201ENSMUST00000198566 127 ntBASIC1.37□□□□□ -2.19
Rftn1Q6A0D4 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.37□□□□□ -2.19
Rftn1Q6A0D4 Gm23012-201ENSMUST00000104149 83 ntBASIC1.36□□□□□ -2.19
Rftn1Q6A0D4 Snord13-201ENSMUST00000157627 104 ntBASIC1.36□□□□□ -2.19
Rftn1Q6A0D4 Mir6394-201ENSMUST00000184738 99 ntBASIC1.36□□□□□ -2.19
Rftn1Q6A0D4 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
Rftn1Q6A0D4 Gm25495-201ENSMUST00000104431 131 ntBASIC1.35□□□□□ -2.19
Rftn1Q6A0D4 Gm22520-201ENSMUST00000158269 129 ntBASIC1.35□□□□□ -2.19
Rftn1Q6A0D4 Gm23340-201ENSMUST00000158955 123 ntBASIC1.35□□□□□ -2.19
Rftn1Q6A0D4 Mir3108-201ENSMUST00000175500 79 ntBASIC1.35□□□□□ -2.19
Rftn1Q6A0D4 Gm23416-201ENSMUST00000175520 95 ntBASIC1.35□□□□□ -2.19
Rftn1Q6A0D4 Gm44211-201ENSMUST00000204867 145 ntBASIC1.35□□□□□ -2.19
Rftn1Q6A0D4 Mir196b-201ENSMUST00000083509 85 ntBASIC1.35□□□□□ -2.19
Rftn1Q6A0D4 Gm25300-201ENSMUST00000175284 84 ntBASIC1.34□□□□□ -2.19
Rftn1Q6A0D4 Mir7063-201ENSMUST00000184158 91 ntBASIC1.34□□□□□ -2.19
Rftn1Q6A0D4 Gm29432-201ENSMUST00000185397 139 ntBASIC1.34□□□□□ -2.19
Rftn1Q6A0D4 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 195.7 ms