Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm24624-201ENSMUST00000082617 164 ntBASIC1,61□□□□□ -2,15
Scaf1Q5U4C3 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1,61□□□□□ -2,15
Scaf1Q5U4C3 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1,6□□□□□ -2,15
Scaf1Q5U4C3 Gm23328-201ENSMUST00000157418 132 ntBASIC1,6□□□□□ -2,15
Scaf1Q5U4C3 Gm28435-201ENSMUST00000185496 108 ntBASIC1,6□□□□□ -2,15
Scaf1Q5U4C3 Gm29047-201ENSMUST00000189816 108 ntBASIC1,6□□□□□ -2,15
Scaf1Q5U4C3 Gm24384-201ENSMUST00000122693 75 ntBASIC1,59□□□□□ -2,15
Scaf1Q5U4C3 Gm23893-201ENSMUST00000158106 134 ntBASIC1,59□□□□□ -2,15
Scaf1Q5U4C3 Gm22980-201ENSMUST00000082608 70 ntBASIC1,59□□□□□ -2,15
Scaf1Q5U4C3 Mir211-201ENSMUST00000083651 106 ntBASIC1,59□□□□□ -2,15
Scaf1Q5U4C3 Snord35a-201ENSMUST00000083884 90 ntBASIC1,59□□□□□ -2,15
Scaf1Q5U4C3 Gm23788-201ENSMUST00000122535 106 ntBASIC1,58□□□□□ -2,16
Scaf1Q5U4C3 Gm26712-201ENSMUST00000180813 217 ntBASIC1,58□□□□□ -2,16
Scaf1Q5U4C3 Gm27974-201ENSMUST00000183415 105 ntBASIC1,58□□□□□ -2,16
Scaf1Q5U4C3 Gm24202-201ENSMUST00000082948 103 ntBASIC1,58□□□□□ -2,16
Scaf1Q5U4C3 Snord32a-201ENSMUST00000083285 83 ntBASIC1,58□□□□□ -2,16
Scaf1Q5U4C3 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1,58□□□□□ -2,16
Scaf1Q5U4C3 Gm42506-201ENSMUST00000202009 150 ntBASIC1,57□□□□□ -2,16
Scaf1Q5U4C3 Gm25696-201ENSMUST00000082900 105 ntBASIC1,57□□□□□ -2,16
Scaf1Q5U4C3 Gm22205-201ENSMUST00000122655 71 ntBASIC1,56□□□□□ -2,16
Scaf1Q5U4C3 Gm23340-201ENSMUST00000158955 123 ntBASIC1,56□□□□□ -2,16
Scaf1Q5U4C3 Gm24777-201ENSMUST00000157644 107 ntBASIC1,55□□□□□ -2,16
Scaf1Q5U4C3 Gm24942-201ENSMUST00000158328 114 ntBASIC1,55□□□□□ -2,16
Scaf1Q5U4C3 Gm25768-201ENSMUST00000158570 98 ntBASIC1,55□□□□□ -2,16
Scaf1Q5U4C3 Gm25300-201ENSMUST00000175284 84 ntBASIC1,55□□□□□ -2,16
Scaf1Q5U4C3 Gm22565-201ENSMUST00000175540 69 ntBASIC1,55□□□□□ -2,16
Scaf1Q5U4C3 Mir5117-201ENSMUST00000083226 84 ntBASIC1,54□□□□□ -2,16
Scaf1Q5U4C3 Gm25715-201ENSMUST00000158627 125 ntBASIC1,53□□□□□ -2,16
Scaf1Q5U4C3 Gm24637-201ENSMUST00000158674 85 ntBASIC1,53□□□□□ -2,16
Scaf1Q5U4C3 Mir6364-201ENSMUST00000183396 86 ntBASIC1,53□□□□□ -2,16
Scaf1Q5U4C3 Gm22605-201ENSMUST00000158289 108 ntBASIC1,52□□□□□ -2,17
Scaf1Q5U4C3 Gm25366-201ENSMUST00000158845 124 ntBASIC1,52□□□□□ -2,17
Scaf1Q5U4C3 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC1,52□□□□□ -2,17
Scaf1Q5U4C3 Mir1904-201ENSMUST00000122702 80 ntBASIC1,51□□□□□ -2,17
Scaf1Q5U4C3 Gm25382-201ENSMUST00000157811 97 ntBASIC1,51□□□□□ -2,17
Scaf1Q5U4C3 Gm22732-201ENSMUST00000158093 121 ntBASIC1,51□□□□□ -2,17
Scaf1Q5U4C3 Gm26363-201ENSMUST00000158866 83 ntBASIC1,51□□□□□ -2,17
Scaf1Q5U4C3 Gm43038-201ENSMUST00000202359 88 ntBASIC1,51□□□□□ -2,17
Scaf1Q5U4C3 Gm24233-201ENSMUST00000104317 122 ntBASIC1,5□□□□□ -2,17
Scaf1Q5U4C3 Gm25787-201ENSMUST00000104709 92 ntBASIC1,5□□□□□ -2,17
Scaf1Q5U4C3 Gm6985-201ENSMUST00000121255 271 ntBASIC1,5□□□□□ -2,17
Scaf1Q5U4C3 Gm24073-201ENSMUST00000158177 106 ntBASIC1,5□□□□□ -2,17
Scaf1Q5U4C3 Mir3070a-201ENSMUST00000175468 89 ntBASIC1,5□□□□□ -2,17
Scaf1Q5U4C3 Gm24203-201ENSMUST00000082949 114 ntBASIC1,5□□□□□ -2,17
Scaf1Q5U4C3 Mir7663-201ENSMUST00000183950 61 ntBASIC1,49□□□□□ -2,17
Scaf1Q5U4C3 Gm22469-201ENSMUST00000104118 133 ntBASIC1,48□□□□□ -2,17
Scaf1Q5U4C3 Gm27943-201ENSMUST00000184844 116 ntBASIC1,48□□□□□ -2,17
Scaf1Q5U4C3 Gm44458-201ENSMUST00000196594 143 ntBASIC1,48□□□□□ -2,17
Scaf1Q5U4C3 Gm24500-201ENSMUST00000158447 124 ntBASIC1,47□□□□□ -2,17
Scaf1Q5U4C3 Gm24678-201ENSMUST00000158756 104 ntBASIC1,47□□□□□ -2,17
Scaf1Q5U4C3 Gm25161-201ENSMUST00000158913 132 ntBASIC1,47□□□□□ -2,17
Scaf1Q5U4C3 Mir695-201ENSMUST00000102261 109 ntBASIC1,46□□□□□ -2,18
Scaf1Q5U4C3 Gm24865-201ENSMUST00000103246 96 ntBASIC1,46□□□□□ -2,18
Scaf1Q5U4C3 Gm23708-201ENSMUST00000104367 123 ntBASIC1,46□□□□□ -2,18
Scaf1Q5U4C3 Snord2-201ENSMUST00000157899 69 ntBASIC1,46□□□□□ -2,18
Scaf1Q5U4C3 Gm22520-201ENSMUST00000158269 129 ntBASIC1,46□□□□□ -2,18
Scaf1Q5U4C3 Gm3702-201ENSMUST00000211754 346 ntBASIC1,46□□□□□ -2,18
Scaf1Q5U4C3 Mir200a-201ENSMUST00000083466 90 ntBASIC1,46□□□□□ -2,18
Scaf1Q5U4C3 Gm23468-201ENSMUST00000157125 108 ntBASIC1,45□□□□□ -2,18
Scaf1Q5U4C3 Gm24020-201ENSMUST00000180156 108 ntBASIC1,45□□□□□ -2,18
Scaf1Q5U4C3 Gm24431-201ENSMUST00000104073 66 ntBASIC1,44□□□□□ -2,18
Scaf1Q5U4C3 Gm25506-201ENSMUST00000104339 70 ntBASIC1,44□□□□□ -2,18
Scaf1Q5U4C3 Mir6381-201ENSMUST00000183426 87 ntBASIC1,43□□□□□ -2,18
Scaf1Q5U4C3 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1,43□□□□□ -2,18
Scaf1Q5U4C3 Gm24593-201ENSMUST00000122507 106 ntBASIC1,42□□□□□ -2,18
Scaf1Q5U4C3 Gm27975-201ENSMUST00000184400 101 ntBASIC1,42□□□□□ -2,18
Scaf1Q5U4C3 Mir362-201ENSMUST00000093592 65 ntBASIC1,42□□□□□ -2,18
Scaf1Q5U4C3 Gm23528-201ENSMUST00000104571 132 ntBASIC1,41□□□□□ -2,18
Scaf1Q5U4C3 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1,41□□□□□ -2,18
Scaf1Q5U4C3 Gm23203-201ENSMUST00000104374 107 ntBASIC1,4□□□□□ -2,19
Scaf1Q5U4C3 Gm25061-201ENSMUST00000104665 107 ntBASIC1,4□□□□□ -2,19
Scaf1Q5U4C3 Gm25622-201ENSMUST00000157217 104 ntBASIC1,4□□□□□ -2,19
Scaf1Q5U4C3 Gm22485-201ENSMUST00000157990 109 ntBASIC1,4□□□□□ -2,19
Scaf1Q5U4C3 Gm24674-201ENSMUST00000179194 104 ntBASIC1,4□□□□□ -2,19
Scaf1Q5U4C3 Gm25870-201ENSMUST00000179845 79 ntBASIC1,4□□□□□ -2,19
Scaf1Q5U4C3 Gm38274-201ENSMUST00000195689 148 ntBASIC1,4□□□□□ -2,19
Scaf1Q5U4C3 Gm24445-201ENSMUST00000083981 107 ntBASIC1,4□□□□□ -2,19
Scaf1Q5U4C3 Gm26338-201ENSMUST00000102372 110 ntBASIC1,39□□□□□ -2,19
Scaf1Q5U4C3 Mir6380-201ENSMUST00000184334 81 ntBASIC1,39□□□□□ -2,19
Scaf1Q5U4C3 Mir7079-201ENSMUST00000184697 69 ntBASIC1,39□□□□□ -2,19
Scaf1Q5U4C3 Mir10b-201ENSMUST00000083566 68 ntBASIC1,39□□□□□ -2,19
Scaf1Q5U4C3 Gm25683-201ENSMUST00000083940 131 ntBASIC1,39□□□□□ -2,19
Scaf1Q5U4C3 Gm25378-201ENSMUST00000104333 129 ntBASIC1,38□□□□□ -2,19
Scaf1Q5U4C3 Gm22458-201ENSMUST00000082576 107 ntBASIC1,38□□□□□ -2,19
Scaf1Q5U4C3 Gm23715-201ENSMUST00000157354 106 ntBASIC1,37□□□□□ -2,19
Scaf1Q5U4C3 Gm23500-201ENSMUST00000157735 98 ntBASIC1,37□□□□□ -2,19
Scaf1Q5U4C3 Gm44301-201ENSMUST00000200362 143 ntBASIC1,37□□□□□ -2,19
Scaf1Q5U4C3 Gm25644-201ENSMUST00000083209 107 ntBASIC1,37□□□□□ -2,19
Scaf1Q5U4C3 Gm22067-201ENSMUST00000122790 107 ntBASIC1,36□□□□□ -2,19
Scaf1Q5U4C3 Mir1950-201ENSMUST00000158526 74 ntBASIC1,36□□□□□ -2,19
Scaf1Q5U4C3 Gm20386-201ENSMUST00000174010 132 ntBASIC1,36□□□□□ -2,19
Scaf1Q5U4C3 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1,35□□□□□ -2,19
Scaf1Q5U4C3 Gm22540-201ENSMUST00000158168 117 ntBASIC1,35□□□□□ -2,19
Scaf1Q5U4C3 Snora26-201ENSMUST00000175614 121 ntBASIC1,35□□□□□ -2,19
Scaf1Q5U4C3 Mir22-201ENSMUST00000083595 95 ntBASIC1,35□□□□□ -2,19
Scaf1Q5U4C3 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1,34□□□□□ -2,19
Scaf1Q5U4C3 Gm24983-201ENSMUST00000104457 69 ntBASIC1,34□□□□□ -2,19
Scaf1Q5U4C3 Mir1187-201ENSMUST00000116936 122 ntBASIC1,34□□□□□ -2,19
Scaf1Q5U4C3 Gm24946-201ENSMUST00000158332 106 ntBASIC1,34□□□□□ -2,19
Scaf1Q5U4C3 Gm22406-201ENSMUST00000174923 93 ntBASIC1,34□□□□□ -2,19
Retrieved 100 of 76,532 protein–RNA pairs in 103,5 ms