Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Mir148b-201ENSMUST00000083626 97 ntBASIC3,17□□□□□ -1,9
Trim41Q5NCC3 Gm23336-201ENSMUST00000117023 123 ntBASIC3,15□□□□□ -1,91
Trim41Q5NCC3 Gm15115-201ENSMUST00000121145 264 ntBASIC3,15□□□□□ -1,91
Trim41Q5NCC3 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC3,15□□□□□ -1,91
Trim41Q5NCC3 Gm43944-201ENSMUST00000205220 120 ntBASIC3,15□□□□□ -1,91
Trim41Q5NCC3 Gm45655-201ENSMUST00000211625 160 ntBASIC3,15□□□□□ -1,91
Trim41Q5NCC3 AC117232.1-201ENSMUST00000197964 119 ntBASIC3,14□□□□□ -1,91
Trim41Q5NCC3 Gm23991-201ENSMUST00000117033 93 ntBASIC3,13□□□□□ -1,91
Trim41Q5NCC3 Mir709-201ENSMUST00000102190 88 ntBASIC3,12□□□□□ -1,91
Trim41Q5NCC3 Gm24476-201ENSMUST00000157437 131 ntBASIC3,12□□□□□ -1,91
Trim41Q5NCC3 Gm25663-201ENSMUST00000157698 135 ntBASIC3,12□□□□□ -1,91
Trim41Q5NCC3 Mir7217-201ENSMUST00000200304 62 ntBASIC3,12□□□□□ -1,91
Trim41Q5NCC3 CT030170.1-201ENSMUST00000222183 148 ntBASIC3,12□□□□□ -1,91
Trim41Q5NCC3 Gm25497-201ENSMUST00000104425 132 ntBASIC3,11□□□□□ -1,91
Trim41Q5NCC3 Gm25648-201ENSMUST00000177844 79 ntBASIC3,11□□□□□ -1,91
Trim41Q5NCC3 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC3,1□□□□□ -1,91
Trim41Q5NCC3 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC3,09□□□□□ -1,91
Trim41Q5NCC3 Mir343-201ENSMUST00000102360 75 ntBASIC3,09□□□□□ -1,91
Trim41Q5NCC3 Mir3108-201ENSMUST00000175500 79 ntBASIC3,09□□□□□ -1,91
Trim41Q5NCC3 Gm27607-201ENSMUST00000185162 122 ntBASIC3,09□□□□□ -1,91
Trim41Q5NCC3 Gm29432-201ENSMUST00000185397 139 ntBASIC3,09□□□□□ -1,91
Trim41Q5NCC3 CT030166.3-201ENSMUST00000223203 193 ntBASIC3,09□□□□□ -1,91
Trim41Q5NCC3 Gm23730-201ENSMUST00000083236 107 ntBASIC3,09□□□□□ -1,91
Trim41Q5NCC3 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC3,09□□□□□ -1,91
Trim41Q5NCC3 Snord2-201ENSMUST00000157899 69 ntBASIC3,08□□□□□ -1,92
Trim41Q5NCC3 Gm23114-201ENSMUST00000158478 117 ntBASIC3,07□□□□□ -1,92
Trim41Q5NCC3 Trav5n-3-201ENSMUST00000164511 270 ntBASIC3,07□□□□□ -1,92
Trim41Q5NCC3 Gm23813-201ENSMUST00000175153 77 ntBASIC3,07□□□□□ -1,92
Trim41Q5NCC3 Gm18433-201ENSMUST00000192747 197 ntBASIC3,07□□□□□ -1,92
Trim41Q5NCC3 Gm23301-201ENSMUST00000082713 65 ntBASIC3,07□□□□□ -1,92
Trim41Q5NCC3 Snord1a-201ENSMUST00000083160 74 ntBASIC3,07□□□□□ -1,92
Trim41Q5NCC3 Gm24612-201ENSMUST00000083267 107 ntBASIC3,07□□□□□ -1,92
Trim41Q5NCC3 Mir10b-201ENSMUST00000083566 68 ntBASIC3,07□□□□□ -1,92
Trim41Q5NCC3 Gm25416-201ENSMUST00000104221 107 ntBASIC3,06□□□□□ -1,92
Trim41Q5NCC3 Mir1961-201ENSMUST00000158643 112 ntBASIC3,06□□□□□ -1,92
Trim41Q5NCC3 Gm43960-201ENSMUST00000204249 5020 ntBASIC3,06□□□□□ -1,92
Trim41Q5NCC3 Gm25641-201ENSMUST00000175135 108 ntBASIC3,05□□□□□ -1,92
Trim41Q5NCC3 Gm25247-201ENSMUST00000175475 90 ntBASIC3,05□□□□□ -1,92
Trim41Q5NCC3 n-R5s197-201ENSMUST00000083302 119 ntBASIC3,04□□□□□ -1,92
Trim41Q5NCC3 Gm26038-201ENSMUST00000158151 106 ntBASIC3,03□□□□□ -1,92
Trim41Q5NCC3 Mir3098-201ENSMUST00000175416 87 ntBASIC3,03□□□□□ -1,92
Trim41Q5NCC3 Gm27977-201ENSMUST00000185159 111 ntBASIC3,03□□□□□ -1,92
Trim41Q5NCC3 Gm23100-201ENSMUST00000083455 141 ntBASIC3,03□□□□□ -1,92
Trim41Q5NCC3 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC3,02□□□□□ -1,93
Trim41Q5NCC3 Gm23419-201ENSMUST00000175523 84 ntBASIC3,02□□□□□ -1,93
Trim41Q5NCC3 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC3,02□□□□□ -1,93
Trim41Q5NCC3 Gm24580-201ENSMUST00000103965 131 ntBASIC3,01□□□□□ -1,93
Trim41Q5NCC3 Gm25279-201ENSMUST00000122608 133 ntBASIC3,01□□□□□ -1,93
Trim41Q5NCC3 Gm26154-201ENSMUST00000102339 96 ntBASIC3□□□□□ -1,93
Trim41Q5NCC3 Gm22087-201ENSMUST00000158339 88 ntBASIC3□□□□□ -1,93
Trim41Q5NCC3 AC238676.2-201ENSMUST00000220910 94 ntBASIC3□□□□□ -1,93
Trim41Q5NCC3 Gm22786-201ENSMUST00000104086 122 ntBASIC2,99□□□□□ -1,93
Trim41Q5NCC3 Gm22541-201ENSMUST00000158165 127 ntBASIC2,99□□□□□ -1,93
Trim41Q5NCC3 Mir6950-201ENSMUST00000184438 73 ntBASIC2,99□□□□□ -1,93
Trim41Q5NCC3 AC211878.4-201ENSMUST00000220970 262 ntBASIC2,99□□□□□ -1,93
Trim41Q5NCC3 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2,99□□□□□ -1,93
Trim41Q5NCC3 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2,97□□□□□ -1,93
Trim41Q5NCC3 Gm42533-201ENSMUST00000196247 157 ntBASIC2,97□□□□□ -1,93
Trim41Q5NCC3 Mir324-201ENSMUST00000083600 89 ntBASIC2,97□□□□□ -1,93
Trim41Q5NCC3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC2,96□□□□□ -1,94
Trim41Q5NCC3 Mir196b-201ENSMUST00000083509 85 ntBASIC2,96□□□□□ -1,94
Trim41Q5NCC3 Gm23469-201ENSMUST00000157131 104 ntBASIC2,95□□□□□ -1,94
Trim41Q5NCC3 Gm24770-201ENSMUST00000158505 92 ntBASIC2,95□□□□□ -1,94
Trim41Q5NCC3 Mir7673-201ENSMUST00000184567 64 ntBASIC2,95□□□□□ -1,94
Trim41Q5NCC3 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC2,95□□□□□ -1,94
Trim41Q5NCC3 Gm25658-201ENSMUST00000158472 128 ntBASIC2,94□□□□□ -1,94
Trim41Q5NCC3 AL772271.1-201ENSMUST00000196848 65 ntBASIC2,94□□□□□ -1,94
Trim41Q5NCC3 Gm44396-201ENSMUST00000199843 114 ntBASIC2,94□□□□□ -1,94
Trim41Q5NCC3 Gm25035-201ENSMUST00000175414 77 ntBASIC2,93□□□□□ -1,94
Trim41Q5NCC3 Mir376b-201ENSMUST00000195930 82 ntBASIC2,93□□□□□ -1,94
Trim41Q5NCC3 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2,92□□□□□ -1,94
Trim41Q5NCC3 Gm22717-201ENSMUST00000122703 171 ntBASIC2,92□□□□□ -1,94
Trim41Q5NCC3 Mir1933-201ENSMUST00000158930 88 ntBASIC2,92□□□□□ -1,94
Trim41Q5NCC3 Gm22466-201ENSMUST00000175278 69 ntBASIC2,92□□□□□ -1,94
Trim41Q5NCC3 Mir6995-201ENSMUST00000183658 71 ntBASIC2,92□□□□□ -1,94
Trim41Q5NCC3 AC125488.1-201ENSMUST00000219586 212 ntBASIC2,92□□□□□ -1,94
Trim41Q5NCC3 Gm29344-201ENSMUST00000068143 210 ntBASIC2,92□□□□□ -1,94
Trim41Q5NCC3 Mir320-201ENSMUST00000083594 82 ntBASIC2,91□□□□□ -1,94
Trim41Q5NCC3 Mir7675-201ENSMUST00000184262 58 ntBASIC2,9□□□□□ -1,95
Trim41Q5NCC3 Gm28383-201ENSMUST00000187563 139 ntBASIC2,9□□□□□ -1,95
Trim41Q5NCC3 Gm37557-201ENSMUST00000191640 139 ntBASIC2,9□□□□□ -1,95
Trim41Q5NCC3 Gm26181-201ENSMUST00000157687 106 ntBASIC2,89□□□□□ -1,95
Trim41Q5NCC3 Gm22474-201ENSMUST00000179407 107 ntBASIC2,89□□□□□ -1,95
Trim41Q5NCC3 Gm27937-201ENSMUST00000183605 88 ntBASIC2,89□□□□□ -1,95
Trim41Q5NCC3 Mir6342-201ENSMUST00000183870 125 ntBASIC2,88□□□□□ -1,95
Trim41Q5NCC3 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC2,87□□□□□ -1,95
Trim41Q5NCC3 Gm26375-201ENSMUST00000101829 106 ntBASIC2,87□□□□□ -1,95
Trim41Q5NCC3 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2,87□□□□□ -1,95
Trim41Q5NCC3 CT025630.1-201ENSMUST00000227901 172 ntBASIC2,87□□□□□ -1,95
Trim41Q5NCC3 Gm25541-201ENSMUST00000116888 126 ntBASIC2,86□□□□□ -1,95
Trim41Q5NCC3 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC2,86□□□□□ -1,95
Trim41Q5NCC3 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC2,86□□□□□ -1,95
Trim41Q5NCC3 Mir669h-201ENSMUST00000116944 125 ntBASIC2,85□□□□□ -1,95
Trim41Q5NCC3 Gm24549-201ENSMUST00000158647 139 ntBASIC2,85□□□□□ -1,95
Trim41Q5NCC3 Scarna3a-201ENSMUST00000158911 140 ntBASIC2,85□□□□□ -1,95
Trim41Q5NCC3 Gm24494-201ENSMUST00000083804 81 ntBASIC2,85□□□□□ -1,95
Trim41Q5NCC3 Mir223-201ENSMUST00000102112 110 ntBASIC2,84□□□□□ -1,95
Trim41Q5NCC3 Gm26491-201ENSMUST00000179268 121 ntBASIC2,84□□□□□ -1,95
Trim41Q5NCC3 Gm23012-201ENSMUST00000104149 83 ntBASIC2,83□□□□□ -1,96
Trim41Q5NCC3 Gm24783-201ENSMUST00000157639 100 ntBASIC2,83□□□□□ -1,96
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms