Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 AC121844.1-201ENSMUST00000218706 137 ntBASIC-3.69□□□□□ -3
Ccdc88bQ4QRL3 Gm9973-202ENSMUST00000220926 166 ntBASIC-3.69□□□□□ -3
Ccdc88bQ4QRL3 Gm12647-201ENSMUST00000118977 265 ntBASIC-3.7□□□□□ -3
Ccdc88bQ4QRL3 Gm23351-201ENSMUST00000158427 125 ntBASIC-3.7□□□□□ -3
Ccdc88bQ4QRL3 Gm27934-201ENSMUST00000158795 63 ntBASIC-3.7□□□□□ -3
Ccdc88bQ4QRL3 Gm24921-201ENSMUST00000083024 107 ntBASIC-3.7□□□□□ -3
Ccdc88bQ4QRL3 Gm14883-201ENSMUST00000120179 157 ntBASIC-3.71□□□□□ -3
Ccdc88bQ4QRL3 Gm22984-201ENSMUST00000122751 122 ntBASIC-3.71□□□□□ -3
Ccdc88bQ4QRL3 Gm27792-201ENSMUST00000184031 115 ntBASIC-3.71□□□□□ -3
Ccdc88bQ4QRL3 AC153646.2-201ENSMUST00000220516 109 ntBASIC-3.71□□□□□ -3
Ccdc88bQ4QRL3 Snora2b-201ENSMUST00000084005 137 ntBASIC-3.71□□□□□ -3
Ccdc88bQ4QRL3 Gm23986-201ENSMUST00000157144 63 ntBASIC-3.72□□□□□ -3
Ccdc88bQ4QRL3 Gm26400-201ENSMUST00000175012 85 ntBASIC-3.72□□□□□ -3
Ccdc88bQ4QRL3 Gm23660-201ENSMUST00000178362 79 ntBASIC-3.72□□□□□ -3
Ccdc88bQ4QRL3 Gm24088-201ENSMUST00000179100 79 ntBASIC-3.72□□□□□ -3
Ccdc88bQ4QRL3 Gm38268-201ENSMUST00000195813 193 ntBASIC-3.72□□□□□ -3
Ccdc88bQ4QRL3 Gm25793-201ENSMUST00000083287 107 ntBASIC-3.72□□□□□ -3
Ccdc88bQ4QRL3 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-3.73□□□□□ -3.01
Ccdc88bQ4QRL3 Gm24097-201ENSMUST00000178720 107 ntBASIC-3.73□□□□□ -3.01
Ccdc88bQ4QRL3 Gm26111-201ENSMUST00000083969 106 ntBASIC-3.73□□□□□ -3.01
Ccdc88bQ4QRL3 Gm24754-201ENSMUST00000177997 107 ntBASIC-3.73□□□□□ -3.01
Ccdc88bQ4QRL3 Gm26180-201ENSMUST00000179942 107 ntBASIC-3.73□□□□□ -3.01
Ccdc88bQ4QRL3 Gm22502-201ENSMUST00000082488 107 ntBASIC-3.73□□□□□ -3.01
Ccdc88bQ4QRL3 Gm23412-201ENSMUST00000083017 107 ntBASIC-3.75□□□□□ -3.01
Ccdc88bQ4QRL3 Gm25859-201ENSMUST00000083710 91 ntBASIC-3.75□□□□□ -3.01
Ccdc88bQ4QRL3 Gm25052-201ENSMUST00000122661 158 ntBASIC-3.76□□□□□ -3.01
Ccdc88bQ4QRL3 Gm22818-201ENSMUST00000157446 104 ntBASIC-3.76□□□□□ -3.01
Ccdc88bQ4QRL3 Gm27919-201ENSMUST00000185163 107 ntBASIC-3.76□□□□□ -3.01
Ccdc88bQ4QRL3 Gm22503-201ENSMUST00000158983 115 ntBASIC-3.77□□□□□ -3.01
Ccdc88bQ4QRL3 Gm22733-201ENSMUST00000158094 91 ntBASIC-3.78□□□□□ -3.01
Ccdc88bQ4QRL3 Gm23016-201ENSMUST00000158431 62 ntBASIC-3.78□□□□□ -3.01
Ccdc88bQ4QRL3 Gm26307-201ENSMUST00000157767 126 ntBASIC-3.79□□□□□ -3.02
Ccdc88bQ4QRL3 Gm23066-201ENSMUST00000158237 71 ntBASIC-3.79□□□□□ -3.02
Ccdc88bQ4QRL3 Gm24134-201ENSMUST00000083361 71 ntBASIC-3.79□□□□□ -3.02
Ccdc88bQ4QRL3 Gm25314-201ENSMUST00000178810 79 ntBASIC-3.8□□□□□ -3.02
Ccdc88bQ4QRL3 Gm25579-201ENSMUST00000083407 106 ntBASIC-3.8□□□□□ -3.02
Ccdc88bQ4QRL3 Gm25641-201ENSMUST00000175135 108 ntBASIC-3.81□□□□□ -3.02
Ccdc88bQ4QRL3 mt-Tn-201ENSMUST00000082399 71 ntBASIC-3.81□□□□□ -3.02
Ccdc88bQ4QRL3 Snord80-201ENSMUST00000083801 81 ntBASIC-3.81□□□□□ -3.02
Ccdc88bQ4QRL3 Mir465c-2-201ENSMUST00000104757 81 ntBASIC-3.82□□□□□ -3.02
Ccdc88bQ4QRL3 Mir6395-201ENSMUST00000183885 91 ntBASIC-3.82□□□□□ -3.02
Ccdc88bQ4QRL3 Gm25705-201ENSMUST00000083119 104 ntBASIC-3.82□□□□□ -3.02
Ccdc88bQ4QRL3 Gm23461-201ENSMUST00000083265 107 ntBASIC-3.82□□□□□ -3.02
Ccdc88bQ4QRL3 Mir465c-1-201ENSMUST00000093560 81 ntBASIC-3.82□□□□□ -3.02
Ccdc88bQ4QRL3 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-3.84□□□□□ -3.02
Ccdc88bQ4QRL3 Gm24901-201ENSMUST00000158125 110 ntBASIC-3.84□□□□□ -3.02
Ccdc88bQ4QRL3 Gm27928-201ENSMUST00000183747 256 ntBASIC-3.84□□□□□ -3.02
Ccdc88bQ4QRL3 mt-Ta-201ENSMUST00000082398 69 ntBASIC-3.84□□□□□ -3.02
Ccdc88bQ4QRL3 Gm44853-201ENSMUST00000209070 250 ntBASIC-3.85□□□□□ -3.03
Ccdc88bQ4QRL3 AC192616.1-201ENSMUST00000221922 132 ntBASIC-3.85□□□□□ -3.03
Ccdc88bQ4QRL3 Gm22573-201ENSMUST00000082982 102 ntBASIC-3.85□□□□□ -3.03
Ccdc88bQ4QRL3 Gm22591-201ENSMUST00000104243 106 ntBASIC-3.86□□□□□ -3.03
Ccdc88bQ4QRL3 Gm22313-201ENSMUST00000158008 129 ntBASIC-3.86□□□□□ -3.03
Ccdc88bQ4QRL3 Gm37646-201ENSMUST00000191756 111 ntBASIC-3.86□□□□□ -3.03
Ccdc88bQ4QRL3 Gm44409-201ENSMUST00000198810 166 ntBASIC-3.86□□□□□ -3.03
Ccdc88bQ4QRL3 Mir28c-201ENSMUST00000200096 75 ntBASIC-3.86□□□□□ -3.03
Ccdc88bQ4QRL3 AC192333.2-201ENSMUST00000224771 196 ntBASIC-3.86□□□□□ -3.03
Ccdc88bQ4QRL3 Gm23384-201ENSMUST00000158593 103 ntBASIC-3.86□□□□□ -3.03
Ccdc88bQ4QRL3 Gm23191-201ENSMUST00000179147 107 ntBASIC-3.86□□□□□ -3.03
Ccdc88bQ4QRL3 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC-3.86□□□□□ -3.03
Ccdc88bQ4QRL3 Gm25895-201ENSMUST00000083714 100 ntBASIC-3.86□□□□□ -3.03
Ccdc88bQ4QRL3 Gm10780-201ENSMUST00000099459 285 ntBASIC-3.86□□□□□ -3.03
Ccdc88bQ4QRL3 Gm24631-201ENSMUST00000122765 81 ntBASIC-3.87□□□□□ -3.03
Ccdc88bQ4QRL3 Gm25367-201ENSMUST00000158846 106 ntBASIC-3.88□□□□□ -3.03
Ccdc88bQ4QRL3 AC131720.2-201ENSMUST00000220420 431 ntBASIC-3.88□□□□□ -3.03
Ccdc88bQ4QRL3 Gm24016-201ENSMUST00000157726 68 ntBASIC-3.89□□□□□ -3.03
Ccdc88bQ4QRL3 Gm24392-201ENSMUST00000158136 103 ntBASIC-3.89□□□□□ -3.03
Ccdc88bQ4QRL3 Gm24667-201ENSMUST00000158938 103 ntBASIC-3.89□□□□□ -3.03
Ccdc88bQ4QRL3 Gm23811-201ENSMUST00000175155 84 ntBASIC-3.89□□□□□ -3.03
Ccdc88bQ4QRL3 Gm28008-201ENSMUST00000184021 186 ntBASIC-3.89□□□□□ -3.03
Ccdc88bQ4QRL3 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC-3.89□□□□□ -3.03
Ccdc88bQ4QRL3 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-3.91□□□□□ -3.03
Ccdc88bQ4QRL3 Gm25163-201ENSMUST00000158905 104 ntBASIC-3.91□□□□□ -3.03
Ccdc88bQ4QRL3 Gm27476-201ENSMUST00000183366 104 ntBASIC-3.91□□□□□ -3.03
Ccdc88bQ4QRL3 Gm23352-201ENSMUST00000158428 64 ntBASIC-3.92□□□□□ -3.04
Ccdc88bQ4QRL3 Gm25131-201ENSMUST00000082653 151 ntBASIC-3.92□□□□□ -3.04
Ccdc88bQ4QRL3 AC116589.3-202ENSMUST00000221770 649 ntBASIC-3.92□□□□□ -3.04
Ccdc88bQ4QRL3 AC116589.6-201ENSMUST00000222252 649 ntBASIC-3.92□□□□□ -3.04
Ccdc88bQ4QRL3 mt-Ts2-201ENSMUST00000082416 59 ntBASIC-3.92□□□□□ -3.04
Ccdc88bQ4QRL3 Mir741-201ENSMUST00000103931 71 ntBASIC-3.93□□□□□ -3.04
Ccdc88bQ4QRL3 Gm22602-201ENSMUST00000157596 95 ntBASIC-3.94□□□□□ -3.04
Ccdc88bQ4QRL3 Gm22384-201ENSMUST00000158187 104 ntBASIC-3.96□□□□□ -3.04
Ccdc88bQ4QRL3 Gm44347-201ENSMUST00000199602 108 ntBASIC-3.96□□□□□ -3.04
Ccdc88bQ4QRL3 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC-3.97□□□□□ -3.04
Ccdc88bQ4QRL3 Mir146-201ENSMUST00000083667 65 ntBASIC-3.97□□□□□ -3.04
Ccdc88bQ4QRL3 Mir384-201ENSMUST00000083565 88 ntBASIC-3.98□□□□□ -3.05
Ccdc88bQ4QRL3 Gm26472-201ENSMUST00000116760 83 ntBASIC-3.98□□□□□ -3.05
Ccdc88bQ4QRL3 Gm25370-201ENSMUST00000158159 94 ntBASIC-3.98□□□□□ -3.05
Ccdc88bQ4QRL3 Gm27997-201ENSMUST00000184942 69 ntBASIC-3.98□□□□□ -3.05
Ccdc88bQ4QRL3 CT025603.4-201ENSMUST00000225777 413 ntBASIC-3.98□□□□□ -3.05
Ccdc88bQ4QRL3 Gm44932-201ENSMUST00000206799 121 ntBASIC-3.99□□□□□ -3.05
Ccdc88bQ4QRL3 Mir16-2-201ENSMUST00000083672 95 ntBASIC-3.99□□□□□ -3.05
Ccdc88bQ4QRL3 Gm24263-201ENSMUST00000104059 107 ntBASIC-4□□□□□ -3.05
Ccdc88bQ4QRL3 Gm25964-201ENSMUST00000157171 97 ntBASIC-4□□□□□ -3.05
Ccdc88bQ4QRL3 Gm23262-201ENSMUST00000158323 168 ntBASIC-4□□□□□ -3.05
Ccdc88bQ4QRL3 Gm11420-201ENSMUST00000120047 402 ntBASIC-4.01□□□□□ -3.05
Ccdc88bQ4QRL3 Gm24315-201ENSMUST00000177835 127 ntBASIC-4.01□□□□□ -3.05
Ccdc88bQ4QRL3 Mir466b-3-201ENSMUST00000103806 81 ntBASIC-4.02□□□□□ -3.05
Ccdc88bQ4QRL3 Mir466p-201ENSMUST00000103925 89 ntBASIC-4.02□□□□□ -3.05
Ccdc88bQ4QRL3 Gm22166-201ENSMUST00000178419 121 ntBASIC-4.02□□□□□ -3.05
Retrieved 100 of 76,532 protein–RNA pairs in 141.9 ms