Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Snord95-201ENSMUST00000082846 68 ntBASIC1.95□□□□□ -2.1
Rnf40Q3U319 Mir653-201ENSMUST00000102402 85 ntBASIC1.94□□□□□ -2.1
Rnf40Q3U319 Gm25968-201ENSMUST00000157167 100 ntBASIC1.94□□□□□ -2.1
Rnf40Q3U319 Mir100-201ENSMUST00000175270 80 ntBASIC1.94□□□□□ -2.1
Rnf40Q3U319 Mir3569-201ENSMUST00000185080 58 ntBASIC1.94□□□□□ -2.1
Rnf40Q3U319 Mir1949-202ENSMUST00000199259 70 ntBASIC1.94□□□□□ -2.1
Rnf40Q3U319 Mir324-201ENSMUST00000083600 89 ntBASIC1.94□□□□□ -2.1
Rnf40Q3U319 Mir669h-201ENSMUST00000116944 125 ntBASIC1.93□□□□□ -2.1
Rnf40Q3U319 Gm24478-201ENSMUST00000157439 158 ntBASIC1.93□□□□□ -2.1
Rnf40Q3U319 Gm24797-201ENSMUST00000178103 107 ntBASIC1.93□□□□□ -2.1
Rnf40Q3U319 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.93□□□□□ -2.1
Rnf40Q3U319 Mir500-201ENSMUST00000093600 92 ntBASIC1.93□□□□□ -2.1
Rnf40Q3U319 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Rnf40Q3U319 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Rnf40Q3U319 Mir669a-3-201ENSMUST00000102074 109 ntBASIC1.91□□□□□ -2.1
Rnf40Q3U319 Gm22386-201ENSMUST00000158192 129 ntBASIC1.91□□□□□ -2.1
Rnf40Q3U319 Gm25936-201ENSMUST00000179952 114 ntBASIC1.91□□□□□ -2.1
Rnf40Q3U319 Mir6406-201ENSMUST00000183592 120 ntBASIC1.91□□□□□ -2.1
Rnf40Q3U319 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.91□□□□□ -2.1
Rnf40Q3U319 Gm45754-201ENSMUST00000212380 279 ntBASIC1.91□□□□□ -2.1
Rnf40Q3U319 Snord96a-201ENSMUST00000082791 81 ntBASIC1.91□□□□□ -2.1
Rnf40Q3U319 Gm23670-201ENSMUST00000157469 119 ntBASIC1.9□□□□□ -2.11
Rnf40Q3U319 Gm24996-201ENSMUST00000158390 99 ntBASIC1.9□□□□□ -2.11
Rnf40Q3U319 Gm22474-201ENSMUST00000179407 107 ntBASIC1.9□□□□□ -2.11
Rnf40Q3U319 Gm27717-201ENSMUST00000183933 151 ntBASIC1.9□□□□□ -2.11
Rnf40Q3U319 Gm38323-201ENSMUST00000192450 210 ntBASIC1.9□□□□□ -2.11
Rnf40Q3U319 Gm42677-201ENSMUST00000196363 127 ntBASIC1.9□□□□□ -2.11
Rnf40Q3U319 Mir30a-201ENSMUST00000083471 71 ntBASIC1.9□□□□□ -2.11
Rnf40Q3U319 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Rnf40Q3U319 Gm24070-201ENSMUST00000104519 130 ntBASIC1.89□□□□□ -2.11
Rnf40Q3U319 Gm13065-201ENSMUST00000119178 141 ntBASIC1.89□□□□□ -2.11
Rnf40Q3U319 Mir7226-201ENSMUST00000184953 60 ntBASIC1.89□□□□□ -2.11
Rnf40Q3U319 Gm22652-201ENSMUST00000083207 131 ntBASIC1.89□□□□□ -2.11
Rnf40Q3U319 Gm25087-201ENSMUST00000101992 78 ntBASIC1.88□□□□□ -2.11
Rnf40Q3U319 Gm24098-201ENSMUST00000102075 109 ntBASIC1.88□□□□□ -2.11
Rnf40Q3U319 Gm25381-201ENSMUST00000102078 109 ntBASIC1.88□□□□□ -2.11
Rnf40Q3U319 Gm24233-201ENSMUST00000104317 122 ntBASIC1.88□□□□□ -2.11
Rnf40Q3U319 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.88□□□□□ -2.11
Rnf40Q3U319 Gm26467-201ENSMUST00000097257 78 ntBASIC1.88□□□□□ -2.11
Rnf40Q3U319 Mir873a-201ENSMUST00000104863 77 ntBASIC1.87□□□□□ -2.11
Rnf40Q3U319 Gm24400-201ENSMUST00000157865 107 ntBASIC1.87□□□□□ -2.11
Rnf40Q3U319 Gm24177-201ENSMUST00000158927 131 ntBASIC1.87□□□□□ -2.11
Rnf40Q3U319 Gm23961-201ENSMUST00000104685 97 ntBASIC1.86□□□□□ -2.11
Rnf40Q3U319 Gm6272-201ENSMUST00000121256 171 ntBASIC1.86□□□□□ -2.11
Rnf40Q3U319 Gm23590-201ENSMUST00000157661 104 ntBASIC1.86□□□□□ -2.11
Rnf40Q3U319 Gm14533-201ENSMUST00000117088 93 ntBASIC1.85□□□□□ -2.11
Rnf40Q3U319 Gm25055-201ENSMUST00000157369 76 ntBASIC1.85□□□□□ -2.11
Rnf40Q3U319 Gm25656-201ENSMUST00000158466 66 ntBASIC1.85□□□□□ -2.11
Rnf40Q3U319 Gm26007-201ENSMUST00000158798 120 ntBASIC1.85□□□□□ -2.11
Rnf40Q3U319 Gm27443-201ENSMUST00000184660 98 ntBASIC1.85□□□□□ -2.11
Rnf40Q3U319 Gm22603-201ENSMUST00000157603 96 ntBASIC1.84□□□□□ -2.11
Rnf40Q3U319 Gm27420-201ENSMUST00000183823 79 ntBASIC1.84□□□□□ -2.11
Rnf40Q3U319 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Rnf40Q3U319 Gm22520-201ENSMUST00000158269 129 ntBASIC1.83□□□□□ -2.12
Rnf40Q3U319 Gm24222-201ENSMUST00000158834 93 ntBASIC1.83□□□□□ -2.12
Rnf40Q3U319 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.83□□□□□ -2.12
Rnf40Q3U319 Gm25094-201ENSMUST00000103992 131 ntBASIC1.82□□□□□ -2.12
Rnf40Q3U319 Gm26259-201ENSMUST00000104778 97 ntBASIC1.82□□□□□ -2.12
Rnf40Q3U319 Gm25309-201ENSMUST00000116728 126 ntBASIC1.82□□□□□ -2.12
Rnf40Q3U319 Gm44408-201ENSMUST00000200205 66 ntBASIC1.82□□□□□ -2.12
Rnf40Q3U319 Gm23989-201ENSMUST00000117030 66 ntBASIC1.81□□□□□ -2.12
Rnf40Q3U319 Gm23048-201ENSMUST00000157237 129 ntBASIC1.81□□□□□ -2.12
Rnf40Q3U319 Gm24288-201ENSMUST00000157630 144 ntBASIC1.81□□□□□ -2.12
Rnf40Q3U319 Mir6351-201ENSMUST00000183826 99 ntBASIC1.81□□□□□ -2.12
Rnf40Q3U319 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Rnf40Q3U319 Gm23010-201ENSMUST00000104151 126 ntBASIC1.8□□□□□ -2.12
Rnf40Q3U319 Mir7026-201ENSMUST00000184384 67 ntBASIC1.8□□□□□ -2.12
Rnf40Q3U319 Mir7231-201ENSMUST00000196252 61 ntBASIC1.8□□□□□ -2.12
Rnf40Q3U319 Gm22720-201ENSMUST00000122710 87 ntBASIC1.79□□□□□ -2.12
Rnf40Q3U319 Gm22551-201ENSMUST00000157795 103 ntBASIC1.79□□□□□ -2.12
Rnf40Q3U319 Gm24723-201ENSMUST00000158233 132 ntBASIC1.79□□□□□ -2.12
Rnf40Q3U319 Gm25836-201ENSMUST00000158918 123 ntBASIC1.79□□□□□ -2.12
Rnf40Q3U319 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.79□□□□□ -2.12
Rnf40Q3U319 Gm24259-201ENSMUST00000083740 107 ntBASIC1.79□□□□□ -2.12
Rnf40Q3U319 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Rnf40Q3U319 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Rnf40Q3U319 Gm22595-201ENSMUST00000104250 130 ntBASIC1.78□□□□□ -2.12
Rnf40Q3U319 Gm22016-201ENSMUST00000158793 114 ntBASIC1.78□□□□□ -2.12
Rnf40Q3U319 Gm23289-201ENSMUST00000175615 108 ntBASIC1.78□□□□□ -2.12
Rnf40Q3U319 Mir6901-201ENSMUST00000185062 62 ntBASIC1.78□□□□□ -2.12
Rnf40Q3U319 Gm43512-201ENSMUST00000198495 176 ntBASIC1.78□□□□□ -2.12
Rnf40Q3U319 Gm26224-201ENSMUST00000082506 80 ntBASIC1.78□□□□□ -2.12
Rnf40Q3U319 Gm24271-201ENSMUST00000102327 111 ntBASIC1.77□□□□□ -2.13
Rnf40Q3U319 Gm27248-201ENSMUST00000184004 166 ntBASIC1.77□□□□□ -2.13
Rnf40Q3U319 Gm38274-201ENSMUST00000195689 148 ntBASIC1.77□□□□□ -2.13
Rnf40Q3U319 Gm24808-201ENSMUST00000157993 118 ntBASIC1.76□□□□□ -2.13
Rnf40Q3U319 Gm22165-201ENSMUST00000158414 103 ntBASIC1.76□□□□□ -2.13
Rnf40Q3U319 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.76□□□□□ -2.13
Rnf40Q3U319 Gm24377-201ENSMUST00000104398 131 ntBASIC1.74□□□□□ -2.13
Rnf40Q3U319 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.74□□□□□ -2.13
Rnf40Q3U319 Gm24531-201ENSMUST00000157945 100 ntBASIC1.74□□□□□ -2.13
Rnf40Q3U319 Traj60-201ENSMUST00000167781 54 ntBASIC1.74□□□□□ -2.13
Rnf40Q3U319 Gm25802-201ENSMUST00000082639 77 ntBASIC1.74□□□□□ -2.13
Rnf40Q3U319 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Rnf40Q3U319 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.73□□□□□ -2.13
Rnf40Q3U319 Gm25886-201ENSMUST00000157780 114 ntBASIC1.73□□□□□ -2.13
Rnf40Q3U319 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.73□□□□□ -2.13
Rnf40Q3U319 Gm24218-201ENSMUST00000180163 105 ntBASIC1.73□□□□□ -2.13
Rnf40Q3U319 Gm28794-201ENSMUST00000185276 136 ntBASIC1.73□□□□□ -2.13
Rnf40Q3U319 Gm44211-201ENSMUST00000204867 145 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 162.9 ms