Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Mir6380-201ENSMUST00000184334 81 ntBASIC1.08□□□□□ -2.24
Ddb1Q3U1J4 Gm23301-201ENSMUST00000082713 65 ntBASIC1.08□□□□□ -2.24
Ddb1Q3U1J4 Gm24697-201ENSMUST00000083881 107 ntBASIC1.08□□□□□ -2.24
Ddb1Q3U1J4 Gm23528-201ENSMUST00000104571 132 ntBASIC1.07□□□□□ -2.24
Ddb1Q3U1J4 Gm26051-201ENSMUST00000104642 93 ntBASIC1.07□□□□□ -2.24
Ddb1Q3U1J4 Gm24073-201ENSMUST00000158177 106 ntBASIC1.07□□□□□ -2.24
Ddb1Q3U1J4 Gm24129-201ENSMUST00000158537 97 ntBASIC1.07□□□□□ -2.24
Ddb1Q3U1J4 Mir29a-201ENSMUST00000083676 88 ntBASIC1.07□□□□□ -2.24
Ddb1Q3U1J4 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Ddb1Q3U1J4 Gm22030-201ENSMUST00000116942 63 ntBASIC1.06□□□□□ -2.24
Ddb1Q3U1J4 Gm26133-201ENSMUST00000157363 100 ntBASIC1.06□□□□□ -2.24
Ddb1Q3U1J4 Mir6342-201ENSMUST00000183870 125 ntBASIC1.06□□□□□ -2.24
Ddb1Q3U1J4 Gm38274-201ENSMUST00000195689 148 ntBASIC1.06□□□□□ -2.24
Ddb1Q3U1J4 Snord32a-201ENSMUST00000083285 83 ntBASIC1.06□□□□□ -2.24
Ddb1Q3U1J4 Gm25681-201ENSMUST00000083938 106 ntBASIC1.06□□□□□ -2.24
Ddb1Q3U1J4 Gm3702-201ENSMUST00000211754 346 ntBASIC1.05□□□□□ -2.24
Ddb1Q3U1J4 Snord35a-201ENSMUST00000083884 90 ntBASIC1.05□□□□□ -2.24
Ddb1Q3U1J4 Gm25683-201ENSMUST00000083940 131 ntBASIC1.05□□□□□ -2.24
Ddb1Q3U1J4 Mir216b-201ENSMUST00000102363 86 ntBASIC1.04□□□□□ -2.24
Ddb1Q3U1J4 Gm26478-201ENSMUST00000122611 133 ntBASIC1.04□□□□□ -2.24
Ddb1Q3U1J4 Mir100-201ENSMUST00000175270 80 ntBASIC1.04□□□□□ -2.24
Ddb1Q3U1J4 Gm27639-201ENSMUST00000184937 85 ntBASIC1.04□□□□□ -2.24
Ddb1Q3U1J4 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.04□□□□□ -2.24
Ddb1Q3U1J4 Gm24648-201ENSMUST00000157111 132 ntBASIC1.03□□□□□ -2.24
Ddb1Q3U1J4 Gm27686-201ENSMUST00000185123 91 ntBASIC1.03□□□□□ -2.24
Ddb1Q3U1J4 Gm20108-201ENSMUST00000219977 153 ntBASIC1.03□□□□□ -2.24
Ddb1Q3U1J4 Gm26441-201ENSMUST00000082590 104 ntBASIC1.03□□□□□ -2.24
Ddb1Q3U1J4 Gm26202-201ENSMUST00000082910 65 ntBASIC1.03□□□□□ -2.24
Ddb1Q3U1J4 Gm25138-201ENSMUST00000083248 136 ntBASIC1.03□□□□□ -2.24
Ddb1Q3U1J4 Mir101a-201ENSMUST00000083517 83 ntBASIC1.03□□□□□ -2.24
Ddb1Q3U1J4 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.03□□□□□ -2.24
Ddb1Q3U1J4 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Ddb1Q3U1J4 Mir5117-201ENSMUST00000083226 84 ntBASIC1.02□□□□□ -2.25
Ddb1Q3U1J4 Gm14947-201ENSMUST00000133704 303 ntBASIC1.01□□□□□ -2.25
Ddb1Q3U1J4 Gm23416-201ENSMUST00000175520 95 ntBASIC1.01□□□□□ -2.25
Ddb1Q3U1J4 Gm27297-201ENSMUST00000183395 105 ntBASIC1.01□□□□□ -2.25
Ddb1Q3U1J4 Mir509-201ENSMUST00000196089 75 ntBASIC1.01□□□□□ -2.25
Ddb1Q3U1J4 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.01□□□□□ -2.25
Ddb1Q3U1J4 Gm44301-201ENSMUST00000200362 143 ntBASIC1.01□□□□□ -2.25
Ddb1Q3U1J4 Gm44211-201ENSMUST00000204867 145 ntBASIC1.01□□□□□ -2.25
Ddb1Q3U1J4 DQ267101-201ENSMUST00000082562 73 ntBASIC1.01□□□□□ -2.25
Ddb1Q3U1J4 Gm23989-201ENSMUST00000117030 66 ntBASIC1□□□□□ -2.25
Ddb1Q3U1J4 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1□□□□□ -2.25
Ddb1Q3U1J4 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1□□□□□ -2.25
Ddb1Q3U1J4 Mir377-201ENSMUST00000083504 68 ntBASIC1□□□□□ -2.25
Ddb1Q3U1J4 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
Ddb1Q3U1J4 Mir695-201ENSMUST00000102261 109 ntBASIC0.99□□□□□ -2.25
Ddb1Q3U1J4 Gm22677-201ENSMUST00000116977 108 ntBASIC0.99□□□□□ -2.25
Ddb1Q3U1J4 Gm23715-201ENSMUST00000157354 106 ntBASIC0.99□□□□□ -2.25
Ddb1Q3U1J4 Gm22732-201ENSMUST00000158093 121 ntBASIC0.99□□□□□ -2.25
Ddb1Q3U1J4 Gm22541-201ENSMUST00000158165 127 ntBASIC0.99□□□□□ -2.25
Ddb1Q3U1J4 Gm24772-201ENSMUST00000158507 110 ntBASIC0.99□□□□□ -2.25
Ddb1Q3U1J4 Gm22458-201ENSMUST00000082576 107 ntBASIC0.99□□□□□ -2.25
Ddb1Q3U1J4 Gm22033-201ENSMUST00000116947 90 ntBASIC0.98□□□□□ -2.25
Ddb1Q3U1J4 Gm22788-201ENSMUST00000157876 61 ntBASIC0.98□□□□□ -2.25
Ddb1Q3U1J4 Gm27975-201ENSMUST00000184400 101 ntBASIC0.98□□□□□ -2.25
Ddb1Q3U1J4 Gm43927-201ENSMUST00000204599 117 ntBASIC0.98□□□□□ -2.25
Ddb1Q3U1J4 Gm22203-201ENSMUST00000158605 58 ntBASIC0.96□□□□□ -2.26
Ddb1Q3U1J4 Gm24678-201ENSMUST00000158756 104 ntBASIC0.96□□□□□ -2.26
Ddb1Q3U1J4 Gm24674-201ENSMUST00000179194 104 ntBASIC0.96□□□□□ -2.26
Ddb1Q3U1J4 Snora75-201ENSMUST00000082903 133 ntBASIC0.96□□□□□ -2.26
Ddb1Q3U1J4 Gm24162-201ENSMUST00000093665 102 ntBASIC0.96□□□□□ -2.26
Ddb1Q3U1J4 Gm22205-201ENSMUST00000122655 71 ntBASIC0.95□□□□□ -2.26
Ddb1Q3U1J4 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.95□□□□□ -2.26
Ddb1Q3U1J4 Gm23369-201ENSMUST00000175406 105 ntBASIC0.95□□□□□ -2.26
Ddb1Q3U1J4 Gm26285-201ENSMUST00000177923 107 ntBASIC0.95□□□□□ -2.26
Ddb1Q3U1J4 Gm23622-201ENSMUST00000082460 107 ntBASIC0.95□□□□□ -2.26
Ddb1Q3U1J4 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.95□□□□□ -2.26
Ddb1Q3U1J4 AC154506.4-201ENSMUST00000224898 3416 ntBASIC0.95□□□□□ -2.26
Ddb1Q3U1J4 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
Ddb1Q3U1J4 Gm25061-201ENSMUST00000104665 107 ntBASIC0.94□□□□□ -2.26
Ddb1Q3U1J4 Gm24208-201ENSMUST00000082783 135 ntBASIC0.94□□□□□ -2.26
Ddb1Q3U1J4 Gm26338-201ENSMUST00000102372 110 ntBASIC0.93□□□□□ -2.26
Ddb1Q3U1J4 Gm22520-201ENSMUST00000158269 129 ntBASIC0.93□□□□□ -2.26
Ddb1Q3U1J4 Gm20386-201ENSMUST00000174010 132 ntBASIC0.93□□□□□ -2.26
Ddb1Q3U1J4 Gm25300-201ENSMUST00000175284 84 ntBASIC0.93□□□□□ -2.26
Ddb1Q3U1J4 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.93□□□□□ -2.26
Ddb1Q3U1J4 Gm43907-201ENSMUST00000203128 117 ntBASIC0.93□□□□□ -2.26
Ddb1Q3U1J4 Gm23735-201ENSMUST00000082551 134 ntBASIC0.93□□□□□ -2.26
Ddb1Q3U1J4 Gm24258-201ENSMUST00000083739 133 ntBASIC0.93□□□□□ -2.26
Ddb1Q3U1J4 Gm23291-201ENSMUST00000175611 78 ntBASIC0.92□□□□□ -2.26
Ddb1Q3U1J4 Mir7010-201ENSMUST00000183464 63 ntBASIC0.92□□□□□ -2.26
Ddb1Q3U1J4 Gm28435-201ENSMUST00000185496 108 ntBASIC0.92□□□□□ -2.26
Ddb1Q3U1J4 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC0.92□□□□□ -2.26
Ddb1Q3U1J4 Gm6985-201ENSMUST00000121255 271 ntBASIC0.91□□□□□ -2.26
Ddb1Q3U1J4 Gm27607-201ENSMUST00000185162 122 ntBASIC0.91□□□□□ -2.26
Ddb1Q3U1J4 Gm25696-201ENSMUST00000082900 105 ntBASIC0.91□□□□□ -2.26
Ddb1Q3U1J4 Gm25040-201ENSMUST00000103877 66 ntBASIC0.9□□□□□ -2.27
Ddb1Q3U1J4 Gm25375-201ENSMUST00000158157 135 ntBASIC0.9□□□□□ -2.27
Ddb1Q3U1J4 Gm25366-201ENSMUST00000158845 124 ntBASIC0.9□□□□□ -2.27
Ddb1Q3U1J4 Gm23788-201ENSMUST00000122535 106 ntBASIC0.89□□□□□ -2.27
Ddb1Q3U1J4 Gm25322-201ENSMUST00000122556 104 ntBASIC0.89□□□□□ -2.27
Ddb1Q3U1J4 Gm23605-201ENSMUST00000157255 127 ntBASIC0.89□□□□□ -2.27
Ddb1Q3U1J4 Gm25382-201ENSMUST00000157811 97 ntBASIC0.89□□□□□ -2.27
Ddb1Q3U1J4 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC0.89□□□□□ -2.27
Ddb1Q3U1J4 Mir1949-202ENSMUST00000199259 70 ntBASIC0.89□□□□□ -2.27
Ddb1Q3U1J4 Mir362-201ENSMUST00000093592 65 ntBASIC0.89□□□□□ -2.27
Ddb1Q3U1J4 Mir466l-201ENSMUST00000104866 121 ntBASIC0.88□□□□□ -2.27
Ddb1Q3U1J4 Mir6364-201ENSMUST00000183396 86 ntBASIC0.88□□□□□ -2.27
Ddb1Q3U1J4 Mir376b-201ENSMUST00000195930 82 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms