Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm26096-201ENSMUST00000179084 79 ntBASIC1.31□□□□□ -2.2
Ebf1Q07802 Gm16399-201ENSMUST00000181423 219 ntBASIC1.31□□□□□ -2.2
Ebf1Q07802 Mir6394-201ENSMUST00000184738 99 ntBASIC1.31□□□□□ -2.2
Ebf1Q07802 Gm44490-201ENSMUST00000198566 127 ntBASIC1.31□□□□□ -2.2
Ebf1Q07802 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.31□□□□□ -2.2
Ebf1Q07802 Gm6293-201ENSMUST00000050339 195 ntBASIC1.31□□□□□ -2.2
Ebf1Q07802 Mir448-201ENSMUST00000083516 112 ntBASIC1.31□□□□□ -2.2
Ebf1Q07802 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Ebf1Q07802 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Ebf1Q07802 Gm25759-201ENSMUST00000103988 129 ntBASIC1.3□□□□□ -2.2
Ebf1Q07802 Gm25968-201ENSMUST00000157167 100 ntBASIC1.3□□□□□ -2.2
Ebf1Q07802 Gm23761-201ENSMUST00000158347 104 ntBASIC1.3□□□□□ -2.2
Ebf1Q07802 Traj60-201ENSMUST00000167781 54 ntBASIC1.3□□□□□ -2.2
Ebf1Q07802 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.3□□□□□ -2.2
Ebf1Q07802 Mir196b-201ENSMUST00000083509 85 ntBASIC1.3□□□□□ -2.2
Ebf1Q07802 Mir500-201ENSMUST00000093600 92 ntBASIC1.3□□□□□ -2.2
Ebf1Q07802 Gm23340-201ENSMUST00000158955 123 ntBASIC1.29□□□□□ -2.2
Ebf1Q07802 Mir376b-201ENSMUST00000195930 82 ntBASIC1.29□□□□□ -2.2
Ebf1Q07802 Gm44483-201ENSMUST00000197203 97 ntBASIC1.29□□□□□ -2.2
Ebf1Q07802 Gm25128-201ENSMUST00000083339 76 ntBASIC1.29□□□□□ -2.2
Ebf1Q07802 Mir377-201ENSMUST00000083504 68 ntBASIC1.29□□□□□ -2.2
Ebf1Q07802 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Ebf1Q07802 Gm24983-201ENSMUST00000104457 69 ntBASIC1.28□□□□□ -2.2
Ebf1Q07802 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Ebf1Q07802 Gm23376-201ENSMUST00000082938 160 ntBASIC1.28□□□□□ -2.2
Ebf1Q07802 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Ebf1Q07802 Gm24342-201ENSMUST00000103907 104 ntBASIC1.27□□□□□ -2.21
Ebf1Q07802 Gm22786-201ENSMUST00000104086 122 ntBASIC1.27□□□□□ -2.21
Ebf1Q07802 Gm6272-201ENSMUST00000121256 171 ntBASIC1.27□□□□□ -2.21
Ebf1Q07802 Gm25619-201ENSMUST00000122621 104 ntBASIC1.27□□□□□ -2.21
Ebf1Q07802 Gm22095-201ENSMUST00000158984 150 ntBASIC1.27□□□□□ -2.21
Ebf1Q07802 Gm24311-201ENSMUST00000082570 104 ntBASIC1.27□□□□□ -2.21
Ebf1Q07802 Mir200b-201ENSMUST00000083615 70 ntBASIC1.27□□□□□ -2.21
Ebf1Q07802 Gm24865-201ENSMUST00000103246 96 ntBASIC1.26□□□□□ -2.21
Ebf1Q07802 Gm25040-201ENSMUST00000103877 66 ntBASIC1.26□□□□□ -2.21
Ebf1Q07802 Snord71-201ENSMUST00000104361 85 ntBASIC1.26□□□□□ -2.21
Ebf1Q07802 Gm23500-201ENSMUST00000157735 98 ntBASIC1.26□□□□□ -2.21
Ebf1Q07802 Gm25768-201ENSMUST00000158570 98 ntBASIC1.26□□□□□ -2.21
Ebf1Q07802 Mir100-201ENSMUST00000175270 80 ntBASIC1.26□□□□□ -2.21
Ebf1Q07802 Mir211-201ENSMUST00000083651 106 ntBASIC1.26□□□□□ -2.21
Ebf1Q07802 Gm23826-201ENSMUST00000157394 119 ntBASIC1.25□□□□□ -2.21
Ebf1Q07802 Gm42506-201ENSMUST00000202009 150 ntBASIC1.25□□□□□ -2.21
Ebf1Q07802 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.25□□□□□ -2.21
Ebf1Q07802 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
Ebf1Q07802 Gm22559-201ENSMUST00000157329 134 ntBASIC1.24□□□□□ -2.21
Ebf1Q07802 Gm26359-201ENSMUST00000158873 101 ntBASIC1.24□□□□□ -2.21
Ebf1Q07802 Gm22652-201ENSMUST00000083207 131 ntBASIC1.24□□□□□ -2.21
Ebf1Q07802 Gm22233-201ENSMUST00000157464 114 ntBASIC1.23□□□□□ -2.21
Ebf1Q07802 Snord2-201ENSMUST00000157899 69 ntBASIC1.23□□□□□ -2.21
Ebf1Q07802 Gm25868-201ENSMUST00000158253 114 ntBASIC1.23□□□□□ -2.21
Ebf1Q07802 Gm23853-201ENSMUST00000158375 104 ntBASIC1.23□□□□□ -2.21
Ebf1Q07802 Gm24221-201ENSMUST00000158833 313 ntBASIC1.23□□□□□ -2.21
Ebf1Q07802 Gm22406-201ENSMUST00000174923 93 ntBASIC1.23□□□□□ -2.21
Ebf1Q07802 Mir6985-201ENSMUST00000184641 61 ntBASIC1.23□□□□□ -2.21
Ebf1Q07802 Mir1949-202ENSMUST00000199259 70 ntBASIC1.23□□□□□ -2.21
Ebf1Q07802 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Ebf1Q07802 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Ebf1Q07802 Gm25964-201ENSMUST00000157171 97 ntBASIC1.22□□□□□ -2.21
Ebf1Q07802 Gm24942-201ENSMUST00000158328 114 ntBASIC1.22□□□□□ -2.21
Ebf1Q07802 Gm25715-201ENSMUST00000158627 125 ntBASIC1.22□□□□□ -2.21
Ebf1Q07802 Mir3079-201ENSMUST00000175428 90 ntBASIC1.22□□□□□ -2.21
Ebf1Q07802 Gm22413-201ENSMUST00000175465 85 ntBASIC1.22□□□□□ -2.21
Ebf1Q07802 Gm22565-201ENSMUST00000175540 69 ntBASIC1.22□□□□□ -2.21
Ebf1Q07802 Gm27717-201ENSMUST00000183933 151 ntBASIC1.22□□□□□ -2.21
Ebf1Q07802 Gm44458-201ENSMUST00000196594 143 ntBASIC1.22□□□□□ -2.21
Ebf1Q07802 Mir344-201ENSMUST00000083634 95 ntBASIC1.22□□□□□ -2.21
Ebf1Q07802 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Ebf1Q07802 Gm13065-201ENSMUST00000119178 141 ntBASIC1.21□□□□□ -2.22
Ebf1Q07802 Gm20305-201ENSMUST00000193226 177 ntBASIC1.21□□□□□ -2.22
Ebf1Q07802 Gm42533-201ENSMUST00000196247 157 ntBASIC1.21□□□□□ -2.22
Ebf1Q07802 Gm23989-201ENSMUST00000117030 66 ntBASIC1.2□□□□□ -2.22
Ebf1Q07802 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.2□□□□□ -2.22
Ebf1Q07802 Gm22485-201ENSMUST00000157990 109 ntBASIC1.2□□□□□ -2.22
Ebf1Q07802 Gm24073-201ENSMUST00000158177 106 ntBASIC1.2□□□□□ -2.22
Ebf1Q07802 Mir6342-201ENSMUST00000183870 125 ntBASIC1.2□□□□□ -2.22
Ebf1Q07802 Gm25166-201ENSMUST00000158909 111 ntBASIC1.19□□□□□ -2.22
Ebf1Q07802 Gm24918-201ENSMUST00000083022 130 ntBASIC1.19□□□□□ -2.22
Ebf1Q07802 Gm25756-201ENSMUST00000103990 136 ntBASIC1.18□□□□□ -2.22
Ebf1Q07802 Gm23708-201ENSMUST00000104367 123 ntBASIC1.18□□□□□ -2.22
Ebf1Q07802 Gm26363-201ENSMUST00000158866 83 ntBASIC1.18□□□□□ -2.22
Ebf1Q07802 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.18□□□□□ -2.22
Ebf1Q07802 Gm11857-201ENSMUST00000119817 324 ntBASIC1.17□□□□□ -2.22
Ebf1Q07802 Gm27711-201ENSMUST00000183802 118 ntBASIC1.17□□□□□ -2.22
Ebf1Q07802 Mir7663-201ENSMUST00000183950 61 ntBASIC1.17□□□□□ -2.22
Ebf1Q07802 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.17□□□□□ -2.22
Ebf1Q07802 Gm24134-201ENSMUST00000083361 71 ntBASIC1.17□□□□□ -2.22
Ebf1Q07802 Gm24233-201ENSMUST00000104317 122 ntBASIC1.16□□□□□ -2.22
Ebf1Q07802 Gm25847-201ENSMUST00000116793 96 ntBASIC1.16□□□□□ -2.22
Ebf1Q07802 Gm22203-201ENSMUST00000158605 58 ntBASIC1.16□□□□□ -2.22
Ebf1Q07802 Gm23306-201ENSMUST00000179058 105 ntBASIC1.16□□□□□ -2.22
Ebf1Q07802 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Ebf1Q07802 Mir101a-201ENSMUST00000083517 83 ntBASIC1.16□□□□□ -2.22
Ebf1Q07802 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.15□□□□□ -2.22
Ebf1Q07802 Gm25506-201ENSMUST00000104339 70 ntBASIC1.15□□□□□ -2.23
Ebf1Q07802 Gm25495-201ENSMUST00000104431 131 ntBASIC1.15□□□□□ -2.23
Ebf1Q07802 Gm24378-201ENSMUST00000122699 106 ntBASIC1.15□□□□□ -2.23
Ebf1Q07802 Gm23893-201ENSMUST00000158106 134 ntBASIC1.15□□□□□ -2.23
Ebf1Q07802 Gm23477-201ENSMUST00000158882 128 ntBASIC1.15□□□□□ -2.23
Ebf1Q07802 Gm23726-201ENSMUST00000178937 67 ntBASIC1.15□□□□□ -2.23
Ebf1Q07802 Mir7010-201ENSMUST00000183464 63 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 135.8 ms