Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.32□□□□□ -2.2
Col8a1Q00780 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.32□□□□□ -2.2
Col8a1Q00780 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Col8a1Q00780 Gm22406-201ENSMUST00000174923 93 ntBASIC1.31□□□□□ -2.2
Col8a1Q00780 Gm22565-201ENSMUST00000175540 69 ntBASIC1.31□□□□□ -2.2
Col8a1Q00780 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Col8a1Q00780 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.31□□□□□ -2.2
Col8a1Q00780 Gm24494-201ENSMUST00000083804 81 ntBASIC1.31□□□□□ -2.2
Col8a1Q00780 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Col8a1Q00780 Mir741-201ENSMUST00000103931 71 ntBASIC1.3□□□□□ -2.2
Col8a1Q00780 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.3□□□□□ -2.2
Col8a1Q00780 Gm43944-201ENSMUST00000205220 120 ntBASIC1.3□□□□□ -2.2
Col8a1Q00780 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Col8a1Q00780 Gm22469-201ENSMUST00000104118 133 ntBASIC1.29□□□□□ -2.2
Col8a1Q00780 AC157278.1-201ENSMUST00000221621 148 ntBASIC1.29□□□□□ -2.2
Col8a1Q00780 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Col8a1Q00780 Mir297-1-201ENSMUST00000103800 76 ntBASIC1.28□□□□□ -2.2
Col8a1Q00780 Gm23500-201ENSMUST00000157735 98 ntBASIC1.28□□□□□ -2.2
Col8a1Q00780 Gm22541-201ENSMUST00000158165 127 ntBASIC1.28□□□□□ -2.2
Col8a1Q00780 Gm22164-201ENSMUST00000158413 106 ntBASIC1.28□□□□□ -2.2
Col8a1Q00780 Gm23114-201ENSMUST00000158478 117 ntBASIC1.28□□□□□ -2.2
Col8a1Q00780 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.28□□□□□ -2.2
Col8a1Q00780 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.28□□□□□ -2.2
Col8a1Q00780 Gm23301-201ENSMUST00000082713 65 ntBASIC1.28□□□□□ -2.2
Col8a1Q00780 Snord45b-201ENSMUST00000082797 71 ntBASIC1.28□□□□□ -2.2
Col8a1Q00780 Mir324-201ENSMUST00000083600 89 ntBASIC1.28□□□□□ -2.2
Col8a1Q00780 Mir494-201ENSMUST00000093632 85 ntBASIC1.28□□□□□ -2.2
Col8a1Q00780 Gm22785-201ENSMUST00000104087 132 ntBASIC1.27□□□□□ -2.21
Col8a1Q00780 Gm25416-201ENSMUST00000104221 107 ntBASIC1.27□□□□□ -2.21
Col8a1Q00780 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.27□□□□□ -2.21
Col8a1Q00780 Gm23991-201ENSMUST00000117033 93 ntBASIC1.27□□□□□ -2.21
Col8a1Q00780 Gm22203-201ENSMUST00000158605 58 ntBASIC1.27□□□□□ -2.21
Col8a1Q00780 Gm24226-201ENSMUST00000158826 97 ntBASIC1.27□□□□□ -2.21
Col8a1Q00780 Mir1933-201ENSMUST00000158930 88 ntBASIC1.27□□□□□ -2.21
Col8a1Q00780 Gm25300-201ENSMUST00000175284 84 ntBASIC1.27□□□□□ -2.21
Col8a1Q00780 Mir1954-201ENSMUST00000175595 86 ntBASIC1.27□□□□□ -2.21
Col8a1Q00780 Mir6351-201ENSMUST00000183826 99 ntBASIC1.27□□□□□ -2.21
Col8a1Q00780 Gm27248-201ENSMUST00000184004 166 ntBASIC1.27□□□□□ -2.21
Col8a1Q00780 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Col8a1Q00780 Gm44962-201ENSMUST00000206460 279 ntBASIC1.27□□□□□ -2.21
Col8a1Q00780 Mir196b-201ENSMUST00000083509 85 ntBASIC1.27□□□□□ -2.21
Col8a1Q00780 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
Col8a1Q00780 Gm23339-201ENSMUST00000158962 139 ntBASIC1.26□□□□□ -2.21
Col8a1Q00780 Gm23636-201ENSMUST00000175070 95 ntBASIC1.26□□□□□ -2.21
Col8a1Q00780 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.26□□□□□ -2.21
Col8a1Q00780 Gm27549-201ENSMUST00000183508 62 ntBASIC1.26□□□□□ -2.21
Col8a1Q00780 Gm27265-201ENSMUST00000183559 77 ntBASIC1.26□□□□□ -2.21
Col8a1Q00780 Gm44384-201ENSMUST00000200208 114 ntBASIC1.26□□□□□ -2.21
Col8a1Q00780 Mir876-201ENSMUST00000104659 81 ntBASIC1.25□□□□□ -2.21
Col8a1Q00780 Gm26274-201ENSMUST00000157103 321 ntBASIC1.25□□□□□ -2.21
Col8a1Q00780 Gm24073-201ENSMUST00000158177 106 ntBASIC1.25□□□□□ -2.21
Col8a1Q00780 Gm44396-201ENSMUST00000199843 114 ntBASIC1.25□□□□□ -2.21
Col8a1Q00780 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Col8a1Q00780 Gm22786-201ENSMUST00000104086 122 ntBASIC1.24□□□□□ -2.21
Col8a1Q00780 Snord2-201ENSMUST00000157899 69 ntBASIC1.24□□□□□ -2.21
Col8a1Q00780 Gm22466-201ENSMUST00000175278 69 ntBASIC1.24□□□□□ -2.21
Col8a1Q00780 Gm23649-201ENSMUST00000179007 107 ntBASIC1.24□□□□□ -2.21
Col8a1Q00780 Gm25759-201ENSMUST00000103988 129 ntBASIC1.23□□□□□ -2.21
Col8a1Q00780 Gm22780-201ENSMUST00000104084 132 ntBASIC1.23□□□□□ -2.21
Col8a1Q00780 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Col8a1Q00780 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
Col8a1Q00780 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.22□□□□□ -2.21
Col8a1Q00780 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
Col8a1Q00780 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.22□□□□□ -2.21
Col8a1Q00780 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.22□□□□□ -2.21
Col8a1Q00780 Gm24580-201ENSMUST00000103965 131 ntBASIC1.21□□□□□ -2.22
Col8a1Q00780 Gm26257-201ENSMUST00000122500 107 ntBASIC1.21□□□□□ -2.22
Col8a1Q00780 Gm25183-201ENSMUST00000157752 106 ntBASIC1.21□□□□□ -2.22
Col8a1Q00780 Gm25328-201ENSMUST00000175013 107 ntBASIC1.21□□□□□ -2.22
Col8a1Q00780 Gm45655-201ENSMUST00000211625 160 ntBASIC1.21□□□□□ -2.22
Col8a1Q00780 Mir377-201ENSMUST00000083504 68 ntBASIC1.21□□□□□ -2.22
Col8a1Q00780 Gm24701-201ENSMUST00000101946 105 ntBASIC1.2□□□□□ -2.22
Col8a1Q00780 Gm25040-201ENSMUST00000103877 66 ntBASIC1.2□□□□□ -2.22
Col8a1Q00780 Snord69-201ENSMUST00000104024 80 ntBASIC1.2□□□□□ -2.22
Col8a1Q00780 Gm23130-201ENSMUST00000104252 74 ntBASIC1.2□□□□□ -2.22
Col8a1Q00780 Gm27450-201ENSMUST00000104632 90 ntBASIC1.2□□□□□ -2.22
Col8a1Q00780 Gm24262-201ENSMUST00000157431 144 ntBASIC1.2□□□□□ -2.22
Col8a1Q00780 Gm22078-201ENSMUST00000157593 103 ntBASIC1.2□□□□□ -2.22
Col8a1Q00780 Gm24549-201ENSMUST00000158647 139 ntBASIC1.2□□□□□ -2.22
Col8a1Q00780 Gm27554-201ENSMUST00000185074 98 ntBASIC1.2□□□□□ -2.22
Col8a1Q00780 Snord96a-201ENSMUST00000082791 81 ntBASIC1.2□□□□□ -2.22
Col8a1Q00780 Gm24927-201ENSMUST00000083397 107 ntBASIC1.2□□□□□ -2.22
Col8a1Q00780 Mir30a-201ENSMUST00000083471 71 ntBASIC1.2□□□□□ -2.22
Col8a1Q00780 Mir15b-201ENSMUST00000083646 64 ntBASIC1.2□□□□□ -2.22
Col8a1Q00780 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.2□□□□□ -2.22
Col8a1Q00780 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.19□□□□□ -2.22
Col8a1Q00780 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Col8a1Q00780 Gm25787-201ENSMUST00000104709 92 ntBASIC1.19□□□□□ -2.22
Col8a1Q00780 Gm24895-201ENSMUST00000122742 74 ntBASIC1.19□□□□□ -2.22
Col8a1Q00780 Snord13-201ENSMUST00000157627 104 ntBASIC1.19□□□□□ -2.22
Col8a1Q00780 Gm25715-201ENSMUST00000158627 125 ntBASIC1.19□□□□□ -2.22
Col8a1Q00780 Gm24174-201ENSMUST00000158933 111 ntBASIC1.19□□□□□ -2.22
Col8a1Q00780 Mir3108-201ENSMUST00000175500 79 ntBASIC1.19□□□□□ -2.22
Col8a1Q00780 Gm27420-201ENSMUST00000183823 79 ntBASIC1.19□□□□□ -2.22
Col8a1Q00780 Mir7663-201ENSMUST00000183950 61 ntBASIC1.19□□□□□ -2.22
Col8a1Q00780 Gm29432-201ENSMUST00000185397 139 ntBASIC1.19□□□□□ -2.22
Col8a1Q00780 Mir376b-201ENSMUST00000195930 82 ntBASIC1.19□□□□□ -2.22
Col8a1Q00780 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Col8a1Q00780 Gm25541-201ENSMUST00000116888 126 ntBASIC1.18□□□□□ -2.22
Col8a1Q00780 Mir100-201ENSMUST00000175270 80 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 137.2 ms