Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm25128-201ENSMUST00000083339 76 ntBASIC1.11□□□□□ -2.23
Shmt1P50431 Gm25506-201ENSMUST00000104339 70 ntBASIC1.1□□□□□ -2.23
Shmt1P50431 Gm23991-201ENSMUST00000117033 93 ntBASIC1.1□□□□□ -2.23
Shmt1P50431 Mir3079-201ENSMUST00000175428 90 ntBASIC1.1□□□□□ -2.23
Shmt1P50431 Gm43038-201ENSMUST00000202359 88 ntBASIC1.1□□□□□ -2.23
Shmt1P50431 Gm43907-201ENSMUST00000203128 117 ntBASIC1.1□□□□□ -2.23
Shmt1P50431 Gm23060-201ENSMUST00000102345 109 ntBASIC1.09□□□□□ -2.23
Shmt1P50431 Mir1187-201ENSMUST00000116936 122 ntBASIC1.09□□□□□ -2.23
Shmt1P50431 Gm24500-201ENSMUST00000158447 124 ntBASIC1.09□□□□□ -2.23
Shmt1P50431 Gm22074-201ENSMUST00000158595 113 ntBASIC1.09□□□□□ -2.23
Shmt1P50431 Gm27987-201ENSMUST00000184023 93 ntBASIC1.09□□□□□ -2.23
Shmt1P50431 Mir6394-201ENSMUST00000184738 99 ntBASIC1.09□□□□□ -2.23
Shmt1P50431 Gm42506-201ENSMUST00000202009 150 ntBASIC1.09□□□□□ -2.23
Shmt1P50431 Gm25854-201ENSMUST00000082792 72 ntBASIC1.09□□□□□ -2.23
Shmt1P50431 Gm24202-201ENSMUST00000082948 103 ntBASIC1.09□□□□□ -2.23
Shmt1P50431 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
Shmt1P50431 Mir6342-201ENSMUST00000183870 125 ntBASIC1.08□□□□□ -2.24
Shmt1P50431 Mir7091-201ENSMUST00000184075 79 ntBASIC1.08□□□□□ -2.24
Shmt1P50431 Gm24199-201ENSMUST00000157808 136 ntBASIC1.07□□□□□ -2.24
Shmt1P50431 Gm25366-201ENSMUST00000158845 124 ntBASIC1.07□□□□□ -2.24
Shmt1P50431 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.07□□□□□ -2.24
Shmt1P50431 Gm42533-201ENSMUST00000196247 157 ntBASIC1.07□□□□□ -2.24
Shmt1P50431 Snora75-201ENSMUST00000082903 133 ntBASIC1.07□□□□□ -2.24
Shmt1P50431 Gm26207-201ENSMUST00000082909 104 ntBASIC1.07□□□□□ -2.24
Shmt1P50431 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.06□□□□□ -2.24
Shmt1P50431 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.06□□□□□ -2.24
Shmt1P50431 Gm25040-201ENSMUST00000103877 66 ntBASIC1.06□□□□□ -2.24
Shmt1P50431 Gm25416-201ENSMUST00000104221 107 ntBASIC1.06□□□□□ -2.24
Shmt1P50431 Gm24868-201ENSMUST00000157265 136 ntBASIC1.06□□□□□ -2.24
Shmt1P50431 Gm24073-201ENSMUST00000158177 106 ntBASIC1.06□□□□□ -2.24
Shmt1P50431 Gm24077-201ENSMUST00000158183 136 ntBASIC1.06□□□□□ -2.24
Shmt1P50431 Gm24946-201ENSMUST00000158332 106 ntBASIC1.06□□□□□ -2.24
Shmt1P50431 Gm23853-201ENSMUST00000158375 104 ntBASIC1.06□□□□□ -2.24
Shmt1P50431 Mir376b-201ENSMUST00000195930 82 ntBASIC1.06□□□□□ -2.24
Shmt1P50431 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Shmt1P50431 Gm23989-201ENSMUST00000117030 66 ntBASIC1.05□□□□□ -2.24
Shmt1P50431 Gm25622-201ENSMUST00000157217 104 ntBASIC1.05□□□□□ -2.24
Shmt1P50431 Gm22565-201ENSMUST00000175540 69 ntBASIC1.05□□□□□ -2.24
Shmt1P50431 Gm25870-201ENSMUST00000179845 79 ntBASIC1.05□□□□□ -2.24
Shmt1P50431 Gm25798-201ENSMUST00000082641 107 ntBASIC1.05□□□□□ -2.24
Shmt1P50431 Gm24983-201ENSMUST00000104457 69 ntBASIC1.04□□□□□ -2.24
Shmt1P50431 Gm24064-201ENSMUST00000157486 106 ntBASIC1.04□□□□□ -2.24
Shmt1P50431 Gm22522-201ENSMUST00000158271 151 ntBASIC1.04□□□□□ -2.24
Shmt1P50431 Gm24221-201ENSMUST00000158833 313 ntBASIC1.04□□□□□ -2.24
Shmt1P50431 Mir1949-202ENSMUST00000199259 70 ntBASIC1.04□□□□□ -2.24
Shmt1P50431 Mir27b-201ENSMUST00000083541 73 ntBASIC1.04□□□□□ -2.24
Shmt1P50431 Gm25417-201ENSMUST00000104212 131 ntBASIC1.03□□□□□ -2.24
Shmt1P50431 Gm24777-201ENSMUST00000157644 107 ntBASIC1.03□□□□□ -2.24
Shmt1P50431 Gm22539-201ENSMUST00000158167 117 ntBASIC1.03□□□□□ -2.24
Shmt1P50431 Gm27415-201ENSMUST00000183720 95 ntBASIC1.03□□□□□ -2.24
Shmt1P50431 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.03□□□□□ -2.24
Shmt1P50431 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
Shmt1P50431 Gm22100-201ENSMUST00000157926 63 ntBASIC1.02□□□□□ -2.25
Shmt1P50431 Gm44211-201ENSMUST00000204867 145 ntBASIC1.02□□□□□ -2.25
Shmt1P50431 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Shmt1P50431 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.02□□□□□ -2.25
Shmt1P50431 Gm6985-201ENSMUST00000121255 271 ntBASIC1.01□□□□□ -2.25
Shmt1P50431 Snord2-201ENSMUST00000157899 69 ntBASIC1.01□□□□□ -2.25
Shmt1P50431 Mir15a-201ENSMUST00000175266 84 ntBASIC1.01□□□□□ -2.25
Shmt1P50431 Gm23416-201ENSMUST00000175520 95 ntBASIC1.01□□□□□ -2.25
Shmt1P50431 Gm27974-201ENSMUST00000183415 105 ntBASIC1.01□□□□□ -2.25
Shmt1P50431 Mir6985-201ENSMUST00000184641 61 ntBASIC1.01□□□□□ -2.25
Shmt1P50431 Gm24988-201ENSMUST00000104460 121 ntBASIC1□□□□□ -2.25
Shmt1P50431 Gm13065-201ENSMUST00000119178 141 ntBASIC1□□□□□ -2.25
Shmt1P50431 Gm22203-201ENSMUST00000158605 58 ntBASIC1□□□□□ -2.25
Shmt1P50431 Gm22406-201ENSMUST00000174923 93 ntBASIC1□□□□□ -2.25
Shmt1P50431 Gm44458-201ENSMUST00000196594 143 ntBASIC1□□□□□ -2.25
Shmt1P50431 Gm25138-201ENSMUST00000083248 136 ntBASIC1□□□□□ -2.25
Shmt1P50431 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Shmt1P50431 Gm23893-201ENSMUST00000158106 134 ntBASIC0.99□□□□□ -2.25
Shmt1P50431 Gm22652-201ENSMUST00000083207 131 ntBASIC0.99□□□□□ -2.25
Shmt1P50431 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Shmt1P50431 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Shmt1P50431 Gm24342-201ENSMUST00000103907 104 ntBASIC0.98□□□□□ -2.25
Shmt1P50431 Gm22520-201ENSMUST00000158269 129 ntBASIC0.98□□□□□ -2.25
Shmt1P50431 Gm27717-201ENSMUST00000183933 151 ntBASIC0.98□□□□□ -2.25
Shmt1P50431 Gm23293-201ENSMUST00000082552 104 ntBASIC0.98□□□□□ -2.25
Shmt1P50431 Gm23056-201ENSMUST00000082803 111 ntBASIC0.98□□□□□ -2.25
Shmt1P50431 Mir34c-201ENSMUST00000083653 77 ntBASIC0.98□□□□□ -2.25
Shmt1P50431 Gm25991-201ENSMUST00000102439 99 ntBASIC0.97□□□□□ -2.25
Shmt1P50431 Gm24233-201ENSMUST00000104317 122 ntBASIC0.97□□□□□ -2.25
Shmt1P50431 Gm25964-201ENSMUST00000157171 97 ntBASIC0.97□□□□□ -2.25
Shmt1P50431 Gm25300-201ENSMUST00000175284 84 ntBASIC0.97□□□□□ -2.25
Shmt1P50431 Mir6380-201ENSMUST00000184334 81 ntBASIC0.97□□□□□ -2.25
Shmt1P50431 Mir344-201ENSMUST00000083634 95 ntBASIC0.97□□□□□ -2.25
Shmt1P50431 Gm23708-201ENSMUST00000104367 123 ntBASIC0.96□□□□□ -2.26
Shmt1P50431 Gm25619-201ENSMUST00000122621 104 ntBASIC0.96□□□□□ -2.26
Shmt1P50431 Gm26359-201ENSMUST00000158873 101 ntBASIC0.96□□□□□ -2.26
Shmt1P50431 Gm25166-201ENSMUST00000158909 111 ntBASIC0.96□□□□□ -2.26
Shmt1P50431 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.96□□□□□ -2.26
Shmt1P50431 Gm26499-201ENSMUST00000178544 79 ntBASIC0.96□□□□□ -2.26
Shmt1P50431 Gm26096-201ENSMUST00000179084 79 ntBASIC0.96□□□□□ -2.26
Shmt1P50431 Mir7010-201ENSMUST00000183464 63 ntBASIC0.96□□□□□ -2.26
Shmt1P50431 Gm24431-201ENSMUST00000104073 66 ntBASIC0.95□□□□□ -2.26
Shmt1P50431 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.95□□□□□ -2.26
Shmt1P50431 Gm25160-201ENSMUST00000158914 102 ntBASIC0.95□□□□□ -2.26
Shmt1P50431 Gm27587-201ENSMUST00000185116 163 ntBASIC0.95□□□□□ -2.26
Shmt1P50431 Gm23570-201ENSMUST00000083029 104 ntBASIC0.95□□□□□ -2.26
Shmt1P50431 Mir10b-201ENSMUST00000083566 68 ntBASIC0.95□□□□□ -2.26
Shmt1P50431 Gm25683-201ENSMUST00000083940 131 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 167.6 ms