Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm22466-201ENSMUST00000175278 69 ntBASIC1.55□□□□□ -2.16
Pde6bP23440 Gm27420-201ENSMUST00000183823 79 ntBASIC1.55□□□□□ -2.16
Pde6bP23440 Mir377-201ENSMUST00000083504 68 ntBASIC1.55□□□□□ -2.16
Pde6bP23440 Gm25416-201ENSMUST00000104221 107 ntBASIC1.54□□□□□ -2.16
Pde6bP23440 Gm24379-201ENSMUST00000122695 86 ntBASIC1.54□□□□□ -2.16
Pde6bP23440 Gm25968-201ENSMUST00000157167 100 ntBASIC1.54□□□□□ -2.16
Pde6bP23440 Mir3098-201ENSMUST00000175416 87 ntBASIC1.54□□□□□ -2.16
Pde6bP23440 Mir343-201ENSMUST00000102360 75 ntBASIC1.53□□□□□ -2.16
Pde6bP23440 Snord2-201ENSMUST00000157899 69 ntBASIC1.53□□□□□ -2.16
Pde6bP23440 Gm24073-201ENSMUST00000158177 106 ntBASIC1.53□□□□□ -2.16
Pde6bP23440 Gm24154-201ENSMUST00000175261 130 ntBASIC1.53□□□□□ -2.16
Pde6bP23440 Mir6240-201ENSMUST00000184281 117 ntBASIC1.53□□□□□ -2.16
Pde6bP23440 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
Pde6bP23440 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.53□□□□□ -2.16
Pde6bP23440 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.53□□□□□ -2.17
Pde6bP23440 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Pde6bP23440 Gm24549-201ENSMUST00000158647 139 ntBASIC1.52□□□□□ -2.17
Pde6bP23440 Mir3968-201ENSMUST00000175355 100 ntBASIC1.52□□□□□ -2.17
Pde6bP23440 Mir500-201ENSMUST00000093600 92 ntBASIC1.52□□□□□ -2.17
Pde6bP23440 Gm25040-201ENSMUST00000103877 66 ntBASIC1.51□□□□□ -2.17
Pde6bP23440 Mir741-201ENSMUST00000103931 71 ntBASIC1.51□□□□□ -2.17
Pde6bP23440 Gm23500-201ENSMUST00000157735 98 ntBASIC1.51□□□□□ -2.17
Pde6bP23440 Gm27549-201ENSMUST00000183508 62 ntBASIC1.51□□□□□ -2.17
Pde6bP23440 Gm38323-201ENSMUST00000192450 210 ntBASIC1.51□□□□□ -2.17
Pde6bP23440 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.51□□□□□ -2.17
Pde6bP23440 Gm26224-201ENSMUST00000082506 80 ntBASIC1.51□□□□□ -2.17
Pde6bP23440 Mir30a-201ENSMUST00000083471 71 ntBASIC1.51□□□□□ -2.17
Pde6bP23440 Gm24331-201ENSMUST00000175099 67 ntBASIC1.5□□□□□ -2.17
Pde6bP23440 Gm23801-201ENSMUST00000175561 67 ntBASIC1.5□□□□□ -2.17
Pde6bP23440 Gm24485-201ENSMUST00000178283 67 ntBASIC1.5□□□□□ -2.17
Pde6bP23440 Gm24580-201ENSMUST00000103965 131 ntBASIC1.49□□□□□ -2.17
Pde6bP23440 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.49□□□□□ -2.17
Pde6bP23440 Gm24396-201ENSMUST00000116905 93 ntBASIC1.48□□□□□ -2.17
Pde6bP23440 Gm24808-201ENSMUST00000157993 118 ntBASIC1.48□□□□□ -2.17
Pde6bP23440 Gm25552-201ENSMUST00000158081 91 ntBASIC1.48□□□□□ -2.17
Pde6bP23440 Mir100-201ENSMUST00000175270 80 ntBASIC1.48□□□□□ -2.17
Pde6bP23440 Gm27711-201ENSMUST00000183802 118 ntBASIC1.48□□□□□ -2.17
Pde6bP23440 Mir6342-201ENSMUST00000183870 125 ntBASIC1.48□□□□□ -2.17
Pde6bP23440 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1.48□□□□□ -2.17
Pde6bP23440 Gm24271-201ENSMUST00000102327 111 ntBASIC1.47□□□□□ -2.17
Pde6bP23440 Traj60-201ENSMUST00000167781 54 ntBASIC1.47□□□□□ -2.17
Pde6bP23440 Mir7059-201ENSMUST00000184825 59 ntBASIC1.47□□□□□ -2.17
Pde6bP23440 Gm23329-201ENSMUST00000157415 108 ntBASIC1.46□□□□□ -2.18
Pde6bP23440 Gm25328-201ENSMUST00000175013 107 ntBASIC1.46□□□□□ -2.18
Pde6bP23440 Mir376b-201ENSMUST00000195930 82 ntBASIC1.46□□□□□ -2.18
Pde6bP23440 Gm23245-201ENSMUST00000083370 135 ntBASIC1.46□□□□□ -2.18
Pde6bP23440 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.46□□□□□ -2.18
Pde6bP23440 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Pde6bP23440 Gm22149-201ENSMUST00000104442 136 ntBASIC1.45□□□□□ -2.18
Pde6bP23440 Gm6272-201ENSMUST00000121256 171 ntBASIC1.45□□□□□ -2.18
Pde6bP23440 Gm23221-201ENSMUST00000158118 93 ntBASIC1.45□□□□□ -2.18
Pde6bP23440 Mir1949-202ENSMUST00000199259 70 ntBASIC1.45□□□□□ -2.18
Pde6bP23440 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Pde6bP23440 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.44□□□□□ -2.18
Pde6bP23440 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Pde6bP23440 Mir297-1-201ENSMUST00000103800 76 ntBASIC1.44□□□□□ -2.18
Pde6bP23440 Gm22780-201ENSMUST00000104084 132 ntBASIC1.44□□□□□ -2.18
Pde6bP23440 Gm25496-201ENSMUST00000104430 120 ntBASIC1.44□□□□□ -2.18
Pde6bP23440 Gm25495-201ENSMUST00000104431 131 ntBASIC1.44□□□□□ -2.18
Pde6bP23440 Gm22559-201ENSMUST00000157329 134 ntBASIC1.44□□□□□ -2.18
Pde6bP23440 Gm23856-201ENSMUST00000158380 99 ntBASIC1.44□□□□□ -2.18
Pde6bP23440 Gm24500-201ENSMUST00000158447 124 ntBASIC1.44□□□□□ -2.18
Pde6bP23440 Mir3108-201ENSMUST00000175500 79 ntBASIC1.44□□□□□ -2.18
Pde6bP23440 Gm16399-201ENSMUST00000181423 219 ntBASIC1.44□□□□□ -2.18
Pde6bP23440 Gm25128-201ENSMUST00000083339 76 ntBASIC1.44□□□□□ -2.18
Pde6bP23440 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Pde6bP23440 Snord45b-201ENSMUST00000082797 71 ntBASIC1.42□□□□□ -2.18
Pde6bP23440 Gm25705-201ENSMUST00000083119 104 ntBASIC1.42□□□□□ -2.18
Pde6bP23440 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Pde6bP23440 Gm23708-201ENSMUST00000104367 123 ntBASIC1.41□□□□□ -2.18
Pde6bP23440 Gm12432-201ENSMUST00000119540 186 ntBASIC1.41□□□□□ -2.18
Pde6bP23440 Gm23328-201ENSMUST00000157418 132 ntBASIC1.41□□□□□ -2.18
Pde6bP23440 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.41□□□□□ -2.18
Pde6bP23440 Gm45655-201ENSMUST00000211625 160 ntBASIC1.41□□□□□ -2.18
Pde6bP23440 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Pde6bP23440 Gm22673-201ENSMUST00000104415 131 ntBASIC1.4□□□□□ -2.19
Pde6bP23440 Gm13065-201ENSMUST00000119178 141 ntBASIC1.4□□□□□ -2.19
Pde6bP23440 Gm27717-201ENSMUST00000183933 151 ntBASIC1.4□□□□□ -2.19
Pde6bP23440 Mir7052-201ENSMUST00000184821 65 ntBASIC1.4□□□□□ -2.19
Pde6bP23440 Gm29432-201ENSMUST00000185397 139 ntBASIC1.4□□□□□ -2.19
Pde6bP23440 AC157278.1-201ENSMUST00000221621 148 ntBASIC1.4□□□□□ -2.19
Pde6bP23440 Gm22652-201ENSMUST00000083207 131 ntBASIC1.4□□□□□ -2.19
Pde6bP23440 Gm23012-201ENSMUST00000104149 83 ntBASIC1.39□□□□□ -2.19
Pde6bP23440 Gm23989-201ENSMUST00000117030 66 ntBASIC1.39□□□□□ -2.19
Pde6bP23440 Gm22663-201ENSMUST00000158721 102 ntBASIC1.39□□□□□ -2.19
Pde6bP23440 Gm23636-201ENSMUST00000175070 95 ntBASIC1.39□□□□□ -2.19
Pde6bP23440 Gm25300-201ENSMUST00000175284 84 ntBASIC1.39□□□□□ -2.19
Pde6bP23440 Gm24252-201ENSMUST00000083700 132 ntBASIC1.39□□□□□ -2.19
Pde6bP23440 Mir494-201ENSMUST00000093632 85 ntBASIC1.39□□□□□ -2.19
Pde6bP23440 Gm24233-201ENSMUST00000104317 122 ntBASIC1.38□□□□□ -2.19
Pde6bP23440 Gm24624-201ENSMUST00000082617 164 ntBASIC1.38□□□□□ -2.19
Pde6bP23440 Gm26301-201ENSMUST00000104813 95 ntBASIC1.37□□□□□ -2.19
Pde6bP23440 Mir8119-201ENSMUST00000183371 129 ntBASIC1.37□□□□□ -2.19
Pde6bP23440 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Pde6bP23440 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Pde6bP23440 Gm23853-201ENSMUST00000158375 104 ntBASIC1.36□□□□□ -2.19
Pde6bP23440 Mir3079-201ENSMUST00000175428 90 ntBASIC1.36□□□□□ -2.19
Pde6bP23440 Gm23649-201ENSMUST00000179007 107 ntBASIC1.36□□□□□ -2.19
Pde6bP23440 Mir7063-201ENSMUST00000184158 91 ntBASIC1.36□□□□□ -2.19
Pde6bP23440 Gm25274-201ENSMUST00000104296 135 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms