Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm22708-201ENSMUST00000158987 103 ntBASIC-0.86□□□□□ -2.55
Lire1P11260 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.86□□□□□ -2.55
Lire1P11260 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-0.86□□□□□ -2.55
Lire1P11260 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC-0.86□□□□□ -2.55
Lire1P11260 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.87□□□□□ -2.55
Lire1P11260 Gm24064-201ENSMUST00000157486 106 ntBASIC-0.87□□□□□ -2.55
Lire1P11260 Gm22503-201ENSMUST00000158983 115 ntBASIC-0.87□□□□□ -2.55
Lire1P11260 Gm22258-201ENSMUST00000177645 94 ntBASIC-0.87□□□□□ -2.55
Lire1P11260 Gm26032-201ENSMUST00000178535 94 ntBASIC-0.87□□□□□ -2.55
Lire1P11260 Gm25210-201ENSMUST00000178813 94 ntBASIC-0.87□□□□□ -2.55
Lire1P11260 Gm25157-201ENSMUST00000178914 94 ntBASIC-0.87□□□□□ -2.55
Lire1P11260 Gm22046-201ENSMUST00000179027 94 ntBASIC-0.87□□□□□ -2.55
Lire1P11260 Gm22941-201ENSMUST00000179630 94 ntBASIC-0.87□□□□□ -2.55
Lire1P11260 Gm25471-201ENSMUST00000180126 94 ntBASIC-0.87□□□□□ -2.55
Lire1P11260 Gm27851-201ENSMUST00000183529 63 ntBASIC-0.87□□□□□ -2.55
Lire1P11260 Gm26478-201ENSMUST00000122611 133 ntBASIC-0.88□□□□□ -2.55
Lire1P11260 Gm24877-201ENSMUST00000158779 116 ntBASIC-0.88□□□□□ -2.55
Lire1P11260 Snord80-201ENSMUST00000083801 81 ntBASIC-0.88□□□□□ -2.55
Lire1P11260 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.89□□□□□ -2.55
Lire1P11260 Gm22772-201ENSMUST00000104451 121 ntBASIC-0.89□□□□□ -2.55
Lire1P11260 Gm23990-201ENSMUST00000117031 117 ntBASIC-0.89□□□□□ -2.55
Lire1P11260 Gm26498-201ENSMUST00000177799 79 ntBASIC-0.89□□□□□ -2.55
Lire1P11260 Gm22638-201ENSMUST00000179674 107 ntBASIC-0.89□□□□□ -2.55
Lire1P11260 Gm26230-201ENSMUST00000180141 79 ntBASIC-0.89□□□□□ -2.55
Lire1P11260 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.89□□□□□ -2.55
Lire1P11260 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.89□□□□□ -2.55
Lire1P11260 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.89□□□□□ -2.55
Lire1P11260 Mir669b-201ENSMUST00000102172 97 ntBASIC-0.9□□□□□ -2.55
Lire1P11260 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.9□□□□□ -2.55
Lire1P11260 AC157602.1-201ENSMUST00000197446 105 ntBASIC-0.9□□□□□ -2.55
Lire1P11260 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.9□□□□□ -2.55
Lire1P11260 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.91□□□□□ -2.56
Lire1P11260 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.91□□□□□ -2.56
Lire1P11260 Gm37796-201ENSMUST00000195327 134 ntBASIC-0.91□□□□□ -2.56
Lire1P11260 Gm23500-201ENSMUST00000157735 98 ntBASIC-0.92□□□□□ -2.56
Lire1P11260 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.92□□□□□ -2.56
Lire1P11260 Gm24141-201ENSMUST00000122776 115 ntBASIC-0.93□□□□□ -2.56
Lire1P11260 Gm23384-201ENSMUST00000158593 103 ntBASIC-0.93□□□□□ -2.56
Lire1P11260 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.93□□□□□ -2.56
Lire1P11260 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.94□□□□□ -2.56
Lire1P11260 Gm24199-201ENSMUST00000157808 136 ntBASIC-0.94□□□□□ -2.56
Lire1P11260 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.94□□□□□ -2.56
Lire1P11260 Gm28724-201ENSMUST00000186149 625 ntBASIC-0.94□□□□□ -2.56
Lire1P11260 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.94□□□□□ -2.56
Lire1P11260 AC151902.2-201ENSMUST00000226419 301 ntBASIC-0.95□□□□□ -2.56
Lire1P11260 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.96□□□□□ -2.56
Lire1P11260 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.97□□□□□ -2.56
Lire1P11260 Gm22196-201ENSMUST00000116865 109 ntBASIC-0.97□□□□□ -2.56
Lire1P11260 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.97□□□□□ -2.56
Lire1P11260 Snord47-201ENSMUST00000083034 77 ntBASIC-0.97□□□□□ -2.56
Lire1P11260 Gm24457-201ENSMUST00000083196 105 ntBASIC-0.97□□□□□ -2.56
Lire1P11260 Gm25879-201ENSMUST00000104330 107 ntBASIC-0.98□□□□□ -2.57
Lire1P11260 Gm23528-201ENSMUST00000104571 132 ntBASIC-0.98□□□□□ -2.57
Lire1P11260 Mir466h-201ENSMUST00000104748 81 ntBASIC-0.98□□□□□ -2.57
Lire1P11260 Gm24717-201ENSMUST00000157522 124 ntBASIC-0.98□□□□□ -2.57
Lire1P11260 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.98□□□□□ -2.57
Lire1P11260 Gm37746-201ENSMUST00000193249 198 ntBASIC-0.98□□□□□ -2.57
Lire1P11260 Gm25370-201ENSMUST00000158159 94 ntBASIC-0.99□□□□□ -2.57
Lire1P11260 Gm27694-201ENSMUST00000184740 86 ntBASIC-0.99□□□□□ -2.57
Lire1P11260 Gm44853-201ENSMUST00000209070 250 ntBASIC-0.99□□□□□ -2.57
Lire1P11260 Gm45492-201ENSMUST00000211611 288 ntBASIC-0.99□□□□□ -2.57
Lire1P11260 Gm23722-201ENSMUST00000083002 130 ntBASIC-0.99□□□□□ -2.57
Lire1P11260 Gm22732-201ENSMUST00000158093 121 ntBASIC-1□□□□□ -2.57
Lire1P11260 Gm24106-201ENSMUST00000175498 127 ntBASIC-1□□□□□ -2.57
Lire1P11260 Mir677-202ENSMUST00000197076 78 ntBASIC-1□□□□□ -2.57
Lire1P11260 Gm24580-201ENSMUST00000103965 131 ntBASIC-1.01□□□□□ -2.57
Lire1P11260 Gm24377-201ENSMUST00000104398 131 ntBASIC-1.01□□□□□ -2.57
Lire1P11260 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.01□□□□□ -2.57
Lire1P11260 Gm25887-201ENSMUST00000157777 84 ntBASIC-1.02□□□□□ -2.57
Lire1P11260 Gm25565-201ENSMUST00000104605 105 ntBASIC-1.03□□□□□ -2.57
Lire1P11260 Gm24835-201ENSMUST00000116777 111 ntBASIC-1.03□□□□□ -2.57
Lire1P11260 Gm22319-201ENSMUST00000157147 122 ntBASIC-1.03□□□□□ -2.57
Lire1P11260 Gm25623-201ENSMUST00000157216 108 ntBASIC-1.03□□□□□ -2.57
Lire1P11260 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.03□□□□□ -2.57
Lire1P11260 Gm22681-201ENSMUST00000083853 106 ntBASIC-1.03□□□□□ -2.57
Lire1P11260 Gm24697-201ENSMUST00000083881 107 ntBASIC-1.03□□□□□ -2.57
Lire1P11260 Snord78-201ENSMUST00000104032 66 ntBASIC-1.04□□□□□ -2.58
Lire1P11260 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.04□□□□□ -2.58
Lire1P11260 mt-Tn-201ENSMUST00000082399 71 ntBASIC-1.04□□□□□ -2.58
Lire1P11260 Gm23507-201ENSMUST00000083078 107 ntBASIC-1.04□□□□□ -2.58
Lire1P11260 Gm12086-201ENSMUST00000120863 228 ntBASIC-1.05□□□□□ -2.58
Lire1P11260 Gm27639-201ENSMUST00000184937 85 ntBASIC-1.05□□□□□ -2.58
Lire1P11260 Gm24947-201ENSMUST00000158334 110 ntBASIC-1.06□□□□□ -2.58
Lire1P11260 Gm24842-201ENSMUST00000158681 54 ntBASIC-1.06□□□□□ -2.58
Lire1P11260 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.06□□□□□ -2.58
Lire1P11260 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.06□□□□□ -2.58
Lire1P11260 Gm26092-201ENSMUST00000179798 97 ntBASIC-1.06□□□□□ -2.58
Lire1P11260 Mir669a-1-201ENSMUST00000180238 97 ntBASIC-1.06□□□□□ -2.58
Lire1P11260 Gm22973-201ENSMUST00000083298 191 ntBASIC-1.06□□□□□ -2.58
Lire1P11260 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.07□□□□□ -2.58
Lire1P11260 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.07□□□□□ -2.58
Lire1P11260 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.07□□□□□ -2.58
Lire1P11260 Gm26054-201ENSMUST00000083037 107 ntBASIC-1.07□□□□□ -2.58
Lire1P11260 Gm22595-201ENSMUST00000104250 130 ntBASIC-1.08□□□□□ -2.58
Lire1P11260 Gm25889-201ENSMUST00000157775 107 ntBASIC-1.08□□□□□ -2.58
Lire1P11260 Gm24750-201ENSMUST00000157843 104 ntBASIC-1.08□□□□□ -2.58
Lire1P11260 Gm25978-201ENSMUST00000158698 90 ntBASIC-1.08□□□□□ -2.58
Lire1P11260 Gm22775-201ENSMUST00000177630 120 ntBASIC-1.08□□□□□ -2.58
Lire1P11260 Gm23569-201ENSMUST00000180120 120 ntBASIC-1.08□□□□□ -2.58
Lire1P11260 Gm43977-201ENSMUST00000203970 189 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 160.1 ms