Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.97□□□□□ -2.56
TnfP06804 AC126939.1-201ENSMUST00000224943 226 ntBASIC-0.97□□□□□ -2.56
TnfP06804 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.97□□□□□ -2.56
TnfP06804 Mir669h-201ENSMUST00000116944 125 ntBASIC-0.98□□□□□ -2.57
TnfP06804 Gm24913-201ENSMUST00000157286 107 ntBASIC-0.98□□□□□ -2.57
TnfP06804 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.98□□□□□ -2.57
TnfP06804 Gm27699-201ENSMUST00000183553 180 ntBASIC-0.98□□□□□ -2.57
TnfP06804 Mir669g-201ENSMUST00000116809 123 ntBASIC-0.99□□□□□ -2.57
TnfP06804 Gm24649-201ENSMUST00000157106 134 ntBASIC-0.99□□□□□ -2.57
TnfP06804 Gm23986-201ENSMUST00000157144 63 ntBASIC-0.99□□□□□ -2.57
TnfP06804 Gm23351-201ENSMUST00000158427 125 ntBASIC-0.99□□□□□ -2.57
TnfP06804 Mir1966-201ENSMUST00000158807 108 ntBASIC-0.99□□□□□ -2.57
TnfP06804 Mir677-202ENSMUST00000197076 78 ntBASIC-0.99□□□□□ -2.57
TnfP06804 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.99□□□□□ -2.57
TnfP06804 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.99□□□□□ -2.57
TnfP06804 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.99□□□□□ -2.57
TnfP06804 Gm14533-201ENSMUST00000117088 93 ntBASIC-1□□□□□ -2.57
TnfP06804 Gm25367-201ENSMUST00000158846 106 ntBASIC-1□□□□□ -2.57
TnfP06804 Gm44909-201ENSMUST00000208756 165 ntBASIC-1□□□□□ -2.57
TnfP06804 Gm22454-201ENSMUST00000082583 107 ntBASIC-1□□□□□ -2.57
TnfP06804 Gm24461-201ENSMUST00000082735 103 ntBASIC-1□□□□□ -2.57
TnfP06804 Gm23461-201ENSMUST00000083265 107 ntBASIC-1□□□□□ -2.57
TnfP06804 Mir302c-201ENSMUST00000083548 68 ntBASIC-1□□□□□ -2.57
TnfP06804 Snord42b-201ENSMUST00000083742 69 ntBASIC-1□□□□□ -2.57
TnfP06804 Gm25091-201ENSMUST00000103997 71 ntBASIC-1.01□□□□□ -2.57
TnfP06804 Gm24983-201ENSMUST00000104457 69 ntBASIC-1.01□□□□□ -2.57
TnfP06804 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.01□□□□□ -2.57
TnfP06804 Gm22699-201ENSMUST00000175376 105 ntBASIC-1.01□□□□□ -2.57
TnfP06804 Gm26084-201ENSMUST00000157903 104 ntBASIC-1.02□□□□□ -2.57
TnfP06804 Gm24131-201ENSMUST00000158539 107 ntBASIC-1.02□□□□□ -2.57
TnfP06804 Gm22203-201ENSMUST00000158605 58 ntBASIC-1.02□□□□□ -2.57
TnfP06804 Gm22259-201ENSMUST00000178926 107 ntBASIC-1.02□□□□□ -2.57
TnfP06804 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.02□□□□□ -2.57
TnfP06804 Gm23344-201ENSMUST00000083818 68 ntBASIC-1.02□□□□□ -2.57
TnfP06804 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.03□□□□□ -2.57
TnfP06804 Gm22336-201ENSMUST00000157719 107 ntBASIC-1.03□□□□□ -2.57
TnfP06804 Mir466b-1-201ENSMUST00000177988 82 ntBASIC-1.03□□□□□ -2.57
TnfP06804 Mir669j-201ENSMUST00000179023 121 ntBASIC-1.03□□□□□ -2.57
TnfP06804 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC-1.03□□□□□ -2.57
TnfP06804 Gm25635-201ENSMUST00000082675 131 ntBASIC-1.03□□□□□ -2.57
TnfP06804 Gm26168-201ENSMUST00000083787 112 ntBASIC-1.03□□□□□ -2.57
TnfP06804 Gm22319-201ENSMUST00000157147 122 ntBASIC-1.04□□□□□ -2.58
TnfP06804 Gm22406-201ENSMUST00000174923 93 ntBASIC-1.04□□□□□ -2.58
TnfP06804 Gm24202-201ENSMUST00000082948 103 ntBASIC-1.04□□□□□ -2.58
TnfP06804 Mir29a-201ENSMUST00000083676 88 ntBASIC-1.04□□□□□ -2.58
TnfP06804 Gm25275-201ENSMUST00000104297 129 ntBASIC-1.05□□□□□ -2.58
TnfP06804 Mir466m-201ENSMUST00000175052 84 ntBASIC-1.06□□□□□ -2.58
TnfP06804 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.06□□□□□ -2.58
TnfP06804 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.06□□□□□ -2.58
TnfP06804 Gm26156-201ENSMUST00000116999 123 ntBASIC-1.07□□□□□ -2.58
TnfP06804 Gm25622-201ENSMUST00000157217 104 ntBASIC-1.07□□□□□ -2.58
TnfP06804 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.07□□□□□ -2.58
TnfP06804 Mir509-201ENSMUST00000196089 75 ntBASIC-1.07□□□□□ -2.58
TnfP06804 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.08□□□□□ -2.58
TnfP06804 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.08□□□□□ -2.58
TnfP06804 Gm26478-201ENSMUST00000122611 133 ntBASIC-1.09□□□□□ -2.58
TnfP06804 Gm25716-201ENSMUST00000158628 104 ntBASIC-1.09□□□□□ -2.58
TnfP06804 Gm23209-201ENSMUST00000158667 110 ntBASIC-1.09□□□□□ -2.58
TnfP06804 Gm22708-201ENSMUST00000158987 103 ntBASIC-1.09□□□□□ -2.58
TnfP06804 Gm8034-201ENSMUST00000178853 132 ntBASIC-1.09□□□□□ -2.58
TnfP06804 Gm27749-201ENSMUST00000183651 125 ntBASIC-1.09□□□□□ -2.58
TnfP06804 Gm37796-201ENSMUST00000195327 134 ntBASIC-1.09□□□□□ -2.58
TnfP06804 Mir6375-201ENSMUST00000197176 95 ntBASIC-1.09□□□□□ -2.58
TnfP06804 Gm45429-201ENSMUST00000209527 172 ntBASIC-1.09□□□□□ -2.58
TnfP06804 Gm25991-201ENSMUST00000102439 99 ntBASIC-1.1□□□□□ -2.59
TnfP06804 Gm22503-201ENSMUST00000158983 115 ntBASIC-1.1□□□□□ -2.59
TnfP06804 Gm22298-201ENSMUST00000082662 133 ntBASIC-1.1□□□□□ -2.59
TnfP06804 Snord45b-201ENSMUST00000082797 71 ntBASIC-1.1□□□□□ -2.59
TnfP06804 Gm24336-201ENSMUST00000104203 146 ntBASIC-1.11□□□□□ -2.59
TnfP06804 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.11□□□□□ -2.59
TnfP06804 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC-1.11□□□□□ -2.59
TnfP06804 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.12□□□□□ -2.59
TnfP06804 Gm24877-201ENSMUST00000158779 116 ntBASIC-1.12□□□□□ -2.59
TnfP06804 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.12□□□□□ -2.59
TnfP06804 Gm42677-201ENSMUST00000196363 127 ntBASIC-1.12□□□□□ -2.59
TnfP06804 Gm25599-201ENSMUST00000157816 103 ntBASIC-1.13□□□□□ -2.59
TnfP06804 Gm27851-201ENSMUST00000183529 63 ntBASIC-1.13□□□□□ -2.59
TnfP06804 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-1.13□□□□□ -2.59
TnfP06804 Snord57-201ENSMUST00000083338 72 ntBASIC-1.13□□□□□ -2.59
TnfP06804 Snord80-201ENSMUST00000083801 81 ntBASIC-1.13□□□□□ -2.59
TnfP06804 Gm24064-201ENSMUST00000157486 106 ntBASIC-1.14□□□□□ -2.59
TnfP06804 Gm22732-201ENSMUST00000158093 121 ntBASIC-1.14□□□□□ -2.59
TnfP06804 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.14□□□□□ -2.59
TnfP06804 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.15□□□□□ -2.59
TnfP06804 Gm24377-201ENSMUST00000104398 131 ntBASIC-1.15□□□□□ -2.59
TnfP06804 Gm22772-201ENSMUST00000104451 121 ntBASIC-1.15□□□□□ -2.59
TnfP06804 Gm27332-201ENSMUST00000184893 112 ntBASIC-1.15□□□□□ -2.59
TnfP06804 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.15□□□□□ -2.59
TnfP06804 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.15□□□□□ -2.59
TnfP06804 Gm18502-201ENSMUST00000218679 199 ntBASIC-1.15□□□□□ -2.59
TnfP06804 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.16□□□□□ -2.6
TnfP06804 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.16□□□□□ -2.6
TnfP06804 Gm22638-201ENSMUST00000179674 107 ntBASIC-1.16□□□□□ -2.6
TnfP06804 AC157602.1-201ENSMUST00000197446 105 ntBASIC-1.16□□□□□ -2.6
TnfP06804 Gm24580-201ENSMUST00000103965 131 ntBASIC-1.17□□□□□ -2.6
TnfP06804 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.17□□□□□ -2.6
TnfP06804 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-1.18□□□□□ -2.6
TnfP06804 Gm23384-201ENSMUST00000158593 103 ntBASIC-1.18□□□□□ -2.6
TnfP06804 Gm23500-201ENSMUST00000157735 98 ntBASIC-1.19□□□□□ -2.6
TnfP06804 Gm23726-201ENSMUST00000178937 67 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 76,532 protein–RNA pairs in 180.7 ms