Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Mir6985-201ENSMUST00000184641 61 ntBASIC1.36□□□□□ -2.19
Ccdc9bA3KGF9 Gm42533-201ENSMUST00000196247 157 ntBASIC1.36□□□□□ -2.19
Ccdc9bA3KGF9 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.36□□□□□ -2.19
Ccdc9bA3KGF9 Gm44962-201ENSMUST00000206460 279 ntBASIC1.36□□□□□ -2.19
Ccdc9bA3KGF9 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.36□□□□□ -2.19
Ccdc9bA3KGF9 Gm23340-201ENSMUST00000158955 123 ntBASIC1.35□□□□□ -2.19
Ccdc9bA3KGF9 Mir3098-201ENSMUST00000175416 87 ntBASIC1.35□□□□□ -2.19
Ccdc9bA3KGF9 Gm23056-201ENSMUST00000082803 111 ntBASIC1.35□□□□□ -2.19
Ccdc9bA3KGF9 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
Ccdc9bA3KGF9 Snord13-201ENSMUST00000157627 104 ntBASIC1.34□□□□□ -2.19
Ccdc9bA3KGF9 Gm42506-201ENSMUST00000202009 150 ntBASIC1.34□□□□□ -2.19
Ccdc9bA3KGF9 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.34□□□□□ -2.2
Ccdc9bA3KGF9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
Ccdc9bA3KGF9 Gm24988-201ENSMUST00000104460 121 ntBASIC1.33□□□□□ -2.2
Ccdc9bA3KGF9 Gm6985-201ENSMUST00000121255 271 ntBASIC1.33□□□□□ -2.2
Ccdc9bA3KGF9 Gm24064-201ENSMUST00000157486 106 ntBASIC1.33□□□□□ -2.2
Ccdc9bA3KGF9 Mir6342-201ENSMUST00000183870 125 ntBASIC1.33□□□□□ -2.2
Ccdc9bA3KGF9 Gm25991-201ENSMUST00000102439 99 ntBASIC1.32□□□□□ -2.2
Ccdc9bA3KGF9 Gm25495-201ENSMUST00000104431 131 ntBASIC1.32□□□□□ -2.2
Ccdc9bA3KGF9 Gm23989-201ENSMUST00000117030 66 ntBASIC1.32□□□□□ -2.2
Ccdc9bA3KGF9 Gm24073-201ENSMUST00000158177 106 ntBASIC1.32□□□□□ -2.2
Ccdc9bA3KGF9 Gm24221-201ENSMUST00000158833 313 ntBASIC1.32□□□□□ -2.2
Ccdc9bA3KGF9 Mir1954-201ENSMUST00000175595 86 ntBASIC1.32□□□□□ -2.2
Ccdc9bA3KGF9 Gm27493-201ENSMUST00000184128 78 ntBASIC1.32□□□□□ -2.2
Ccdc9bA3KGF9 Mir1949-202ENSMUST00000199259 70 ntBASIC1.32□□□□□ -2.2
Ccdc9bA3KGF9 Gm22652-201ENSMUST00000083207 131 ntBASIC1.32□□□□□ -2.2
Ccdc9bA3KGF9 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Ccdc9bA3KGF9 Gm24983-201ENSMUST00000104457 69 ntBASIC1.31□□□□□ -2.2
Ccdc9bA3KGF9 Gm13065-201ENSMUST00000119178 141 ntBASIC1.31□□□□□ -2.2
Ccdc9bA3KGF9 Gm25166-201ENSMUST00000158909 111 ntBASIC1.31□□□□□ -2.2
Ccdc9bA3KGF9 Gm23293-201ENSMUST00000082552 104 ntBASIC1.31□□□□□ -2.2
Ccdc9bA3KGF9 Gm24895-201ENSMUST00000122742 74 ntBASIC1.3□□□□□ -2.2
Ccdc9bA3KGF9 Gm22559-201ENSMUST00000157329 134 ntBASIC1.3□□□□□ -2.2
Ccdc9bA3KGF9 Gm23558-201ENSMUST00000157823 80 ntBASIC1.3□□□□□ -2.2
Ccdc9bA3KGF9 Snord2-201ENSMUST00000157899 69 ntBASIC1.3□□□□□ -2.2
Ccdc9bA3KGF9 Gm22565-201ENSMUST00000175540 69 ntBASIC1.3□□□□□ -2.2
Ccdc9bA3KGF9 Gm24495-201ENSMUST00000178575 79 ntBASIC1.3□□□□□ -2.2
Ccdc9bA3KGF9 Gm22253-201ENSMUST00000179870 79 ntBASIC1.3□□□□□ -2.2
Ccdc9bA3KGF9 Gm27717-201ENSMUST00000183933 151 ntBASIC1.3□□□□□ -2.2
Ccdc9bA3KGF9 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.29□□□□□ -2.2
Ccdc9bA3KGF9 Gm25609-201ENSMUST00000104019 104 ntBASIC1.29□□□□□ -2.2
Ccdc9bA3KGF9 Gm22406-201ENSMUST00000174923 93 ntBASIC1.29□□□□□ -2.2
Ccdc9bA3KGF9 Gm44483-201ENSMUST00000197203 97 ntBASIC1.29□□□□□ -2.2
Ccdc9bA3KGF9 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Ccdc9bA3KGF9 Gm23500-201ENSMUST00000157735 98 ntBASIC1.28□□□□□ -2.2
Ccdc9bA3KGF9 Gm44458-201ENSMUST00000196594 143 ntBASIC1.28□□□□□ -2.2
Ccdc9bA3KGF9 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.27□□□□□ -2.21
Ccdc9bA3KGF9 Gm11857-201ENSMUST00000119817 324 ntBASIC1.27□□□□□ -2.21
Ccdc9bA3KGF9 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.27□□□□□ -2.21
Ccdc9bA3KGF9 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.27□□□□□ -2.21
Ccdc9bA3KGF9 Mir15a-201ENSMUST00000175266 84 ntBASIC1.27□□□□□ -2.21
Ccdc9bA3KGF9 Gm23221-201ENSMUST00000158118 93 ntBASIC1.26□□□□□ -2.21
Ccdc9bA3KGF9 Gm25160-201ENSMUST00000158914 102 ntBASIC1.26□□□□□ -2.21
Ccdc9bA3KGF9 Gm23416-201ENSMUST00000175520 95 ntBASIC1.26□□□□□ -2.21
Ccdc9bA3KGF9 Gm26499-201ENSMUST00000178544 79 ntBASIC1.26□□□□□ -2.21
Ccdc9bA3KGF9 Gm26096-201ENSMUST00000179084 79 ntBASIC1.26□□□□□ -2.21
Ccdc9bA3KGF9 Gm6293-201ENSMUST00000050339 195 ntBASIC1.26□□□□□ -2.21
Ccdc9bA3KGF9 Gm23570-201ENSMUST00000083029 104 ntBASIC1.26□□□□□ -2.21
Ccdc9bA3KGF9 Gm23245-201ENSMUST00000083370 135 ntBASIC1.26□□□□□ -2.21
Ccdc9bA3KGF9 Mir101a-201ENSMUST00000083517 83 ntBASIC1.26□□□□□ -2.21
Ccdc9bA3KGF9 Gm22780-201ENSMUST00000104084 132 ntBASIC1.25□□□□□ -2.21
Ccdc9bA3KGF9 Gm25619-201ENSMUST00000122621 104 ntBASIC1.25□□□□□ -2.21
Ccdc9bA3KGF9 Mir7010-201ENSMUST00000183464 63 ntBASIC1.25□□□□□ -2.21
Ccdc9bA3KGF9 Gm44211-201ENSMUST00000204867 145 ntBASIC1.25□□□□□ -2.21
Ccdc9bA3KGF9 Gm24233-201ENSMUST00000104317 122 ntBASIC1.24□□□□□ -2.21
Ccdc9bA3KGF9 Gm23708-201ENSMUST00000104367 123 ntBASIC1.24□□□□□ -2.21
Ccdc9bA3KGF9 Gm22067-201ENSMUST00000122790 107 ntBASIC1.24□□□□□ -2.21
Ccdc9bA3KGF9 Gm24500-201ENSMUST00000158447 124 ntBASIC1.24□□□□□ -2.21
Ccdc9bA3KGF9 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.24□□□□□ -2.21
Ccdc9bA3KGF9 Gm11333-201ENSMUST00000119479 148 ntBASIC1.23□□□□□ -2.21
Ccdc9bA3KGF9 Gm23636-201ENSMUST00000175070 95 ntBASIC1.23□□□□□ -2.21
Ccdc9bA3KGF9 Gm27711-201ENSMUST00000183802 118 ntBASIC1.23□□□□□ -2.21
Ccdc9bA3KGF9 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.22□□□□□ -2.21
Ccdc9bA3KGF9 Gm24288-201ENSMUST00000157630 144 ntBASIC1.22□□□□□ -2.21
Ccdc9bA3KGF9 Gm22663-201ENSMUST00000158721 102 ntBASIC1.22□□□□□ -2.21
Ccdc9bA3KGF9 Gm26359-201ENSMUST00000158873 101 ntBASIC1.22□□□□□ -2.21
Ccdc9bA3KGF9 Gm25138-201ENSMUST00000083248 136 ntBASIC1.22□□□□□ -2.21
Ccdc9bA3KGF9 Gm22469-201ENSMUST00000104118 133 ntBASIC1.21□□□□□ -2.22
Ccdc9bA3KGF9 Gm25964-201ENSMUST00000157171 97 ntBASIC1.21□□□□□ -2.22
Ccdc9bA3KGF9 Gm22520-201ENSMUST00000158269 129 ntBASIC1.21□□□□□ -2.22
Ccdc9bA3KGF9 Gm22203-201ENSMUST00000158605 58 ntBASIC1.21□□□□□ -2.22
Ccdc9bA3KGF9 Mir196b-201ENSMUST00000083509 85 ntBASIC1.21□□□□□ -2.22
Ccdc9bA3KGF9 Gm26029-201ENSMUST00000158659 132 ntBASIC1.2□□□□□ -2.22
Ccdc9bA3KGF9 Gm25300-201ENSMUST00000175284 84 ntBASIC1.2□□□□□ -2.22
Ccdc9bA3KGF9 Mir33-201ENSMUST00000083531 69 ntBASIC1.2□□□□□ -2.22
Ccdc9bA3KGF9 Gm23203-201ENSMUST00000104374 107 ntBASIC1.19□□□□□ -2.22
Ccdc9bA3KGF9 Mir1197-201ENSMUST00000117037 120 ntBASIC1.19□□□□□ -2.22
Ccdc9bA3KGF9 Gm25768-201ENSMUST00000158570 98 ntBASIC1.19□□□□□ -2.22
Ccdc9bA3KGF9 Gm22074-201ENSMUST00000158595 113 ntBASIC1.19□□□□□ -2.22
Ccdc9bA3KGF9 Gm23376-201ENSMUST00000082938 160 ntBASIC1.19□□□□□ -2.22
Ccdc9bA3KGF9 Gm22413-201ENSMUST00000175465 85 ntBASIC1.18□□□□□ -2.22
Ccdc9bA3KGF9 Gm23012-201ENSMUST00000104149 83 ntBASIC1.17□□□□□ -2.22
Ccdc9bA3KGF9 Gm24252-201ENSMUST00000083700 132 ntBASIC1.17□□□□□ -2.22
Ccdc9bA3KGF9 Gm25787-201ENSMUST00000104709 92 ntBASIC1.16□□□□□ -2.22
Ccdc9bA3KGF9 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.16□□□□□ -2.22
Ccdc9bA3KGF9 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.16□□□□□ -2.22
Ccdc9bA3KGF9 Gm24134-201ENSMUST00000083361 71 ntBASIC1.16□□□□□ -2.22
Ccdc9bA3KGF9 Gm27974-201ENSMUST00000183415 105 ntBASIC1.15□□□□□ -2.23
Ccdc9bA3KGF9 DQ267101-201ENSMUST00000082562 73 ntBASIC1.15□□□□□ -2.23
Ccdc9bA3KGF9 Gm24942-201ENSMUST00000158328 114 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms