Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm24652-201ENSMUST00000178223 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm22629-201ENSMUST00000178272 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm24021-201ENSMUST00000178435 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm22274-201ENSMUST00000178441 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm22050-201ENSMUST00000178442 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm23688-201ENSMUST00000178502 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm23944-201ENSMUST00000178607 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm26283-201ENSMUST00000178625 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm25452-201ENSMUST00000178776 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm23286-201ENSMUST00000178963 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm22640-201ENSMUST00000179035 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm25984-201ENSMUST00000179129 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm25585-201ENSMUST00000179469 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm26374-201ENSMUST00000179737 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm24040-201ENSMUST00000179786 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm25017-201ENSMUST00000179805 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm23618-201ENSMUST00000179912 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm26284-201ENSMUST00000180107 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm24570-201ENSMUST00000180314 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm24654-201ENSMUST00000180315 79 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm28001-201ENSMUST00000183561 117 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Mir6237-201ENSMUST00000183808 91 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm25820-201ENSMUST00000198589 127 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Gm42844-201ENSMUST00000200355 112 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Mir18-201ENSMUST00000083469 96 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Mir10b-201ENSMUST00000083566 68 ntBASIC0,19□□□□□ -2,38
H2afb1S4R1E0 Mir670-201ENSMUST00000102380 100 ntBASIC0,18□□□□□ -2,38
H2afb1S4R1E0 Gm23653-201ENSMUST00000116751 97 ntBASIC0,18□□□□□ -2,38
H2afb1S4R1E0 Gm25889-201ENSMUST00000157775 107 ntBASIC0,18□□□□□ -2,38
H2afb1S4R1E0 Gm23008-201ENSMUST00000158946 80 ntBASIC0,18□□□□□ -2,38
H2afb1S4R1E0 Mir6365-201ENSMUST00000183990 101 ntBASIC0,18□□□□□ -2,38
H2afb1S4R1E0 Gm23020-201ENSMUST00000158766 253 ntBASIC0,17□□□□□ -2,38
H2afb1S4R1E0 Gm25646-201ENSMUST00000178527 79 ntBASIC0,17□□□□□ -2,38
H2afb1S4R1E0 Gm22509-201ENSMUST00000082775 107 ntBASIC0,17□□□□□ -2,38
H2afb1S4R1E0 Gm23138-201ENSMUST00000083365 103 ntBASIC0,17□□□□□ -2,38
H2afb1S4R1E0 Gm24605-201ENSMUST00000104772 96 ntBASIC0,16□□□□□ -2,38
H2afb1S4R1E0 Gm26478-201ENSMUST00000122611 133 ntBASIC0,16□□□□□ -2,38
H2afb1S4R1E0 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0,16□□□□□ -2,38
H2afb1S4R1E0 Gm22055-201ENSMUST00000083388 107 ntBASIC0,16□□□□□ -2,38
H2afb1S4R1E0 Mir466-201ENSMUST00000093591 73 ntBASIC0,16□□□□□ -2,38
H2afb1S4R1E0 Gm22490-201ENSMUST00000157188 119 ntBASIC0,15□□□□□ -2,39
H2afb1S4R1E0 Gm22203-201ENSMUST00000158605 58 ntBASIC0,15□□□□□ -2,39
H2afb1S4R1E0 Gm22673-201ENSMUST00000104415 131 ntBASIC0,14□□□□□ -2,39
H2afb1S4R1E0 Mir509-201ENSMUST00000196089 75 ntBASIC0,14□□□□□ -2,39
H2afb1S4R1E0 Gm44803-201ENSMUST00000204384 156 ntBASIC0,14□□□□□ -2,39
H2afb1S4R1E0 Mir7-1-201ENSMUST00000083500 108 ntBASIC0,14□□□□□ -2,39
H2afb1S4R1E0 Gm25337-201ENSMUST00000083723 104 ntBASIC0,14□□□□□ -2,39
H2afb1S4R1E0 Gm25684-201ENSMUST00000083941 107 ntBASIC0,14□□□□□ -2,39
H2afb1S4R1E0 Mir363-201ENSMUST00000093598 75 ntBASIC0,14□□□□□ -2,39
H2afb1S4R1E0 Gm42506-201ENSMUST00000202009 150 ntBASIC0,13□□□□□ -2,39
H2afb1S4R1E0 mt-Tv-201ENSMUST00000082389 69 ntBASIC0,13□□□□□ -2,39
H2afb1S4R1E0 Mir710-201ENSMUST00000102088 110 ntBASIC0,12□□□□□ -2,39
H2afb1S4R1E0 Gm25170-201ENSMUST00000104191 129 ntBASIC0,12□□□□□ -2,39
H2afb1S4R1E0 Gm26421-201ENSMUST00000104279 132 ntBASIC0,12□□□□□ -2,39
H2afb1S4R1E0 Gm23321-201ENSMUST00000104465 126 ntBASIC0,12□□□□□ -2,39
H2afb1S4R1E0 Gm25161-201ENSMUST00000158913 132 ntBASIC0,12□□□□□ -2,39
H2afb1S4R1E0 Snord95-201ENSMUST00000082846 68 ntBASIC0,12□□□□□ -2,39
H2afb1S4R1E0 Gm22381-201ENSMUST00000158186 107 ntBASIC0,11□□□□□ -2,39
H2afb1S4R1E0 Gm29047-201ENSMUST00000189816 108 ntBASIC0,11□□□□□ -2,39
H2afb1S4R1E0 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC0,11□□□□□ -2,39
H2afb1S4R1E0 Gm24697-201ENSMUST00000083881 107 ntBASIC0,11□□□□□ -2,39
H2afb1S4R1E0 Gm26109-201ENSMUST00000083970 70 ntBASIC0,11□□□□□ -2,39
H2afb1S4R1E0 Mir3473d-201ENSMUST00000175346 81 ntBASIC0,1□□□□□ -2,39
H2afb1S4R1E0 AC157602.1-201ENSMUST00000197446 105 ntBASIC0,1□□□□□ -2,39
H2afb1S4R1E0 Gm24705-201ENSMUST00000082808 107 ntBASIC0,1□□□□□ -2,39
H2afb1S4R1E0 Mir410-201ENSMUST00000083563 81 ntBASIC0,1□□□□□ -2,39
H2afb1S4R1E0 Gm22003-201ENSMUST00000101885 107 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm24983-201ENSMUST00000104457 69 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 n-R5s18-201ENSMUST00000122740 121 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm25055-201ENSMUST00000157369 76 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm26007-201ENSMUST00000158798 120 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm25098-201ENSMUST00000177580 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm23356-201ENSMUST00000177610 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm24027-201ENSMUST00000177611 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm22511-201ENSMUST00000177628 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm22630-201ENSMUST00000177781 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm23560-201ENSMUST00000177782 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm25462-201ENSMUST00000177833 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm26059-201ENSMUST00000177865 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm22255-201ENSMUST00000177933 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm25146-201ENSMUST00000177976 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm25523-201ENSMUST00000178044 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm24585-201ENSMUST00000178104 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm22627-201ENSMUST00000178127 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm22912-201ENSMUST00000178242 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm24866-201ENSMUST00000178338 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm22524-201ENSMUST00000178357 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm25710-201ENSMUST00000178367 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm23575-201ENSMUST00000178406 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm24872-201ENSMUST00000178434 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm22449-201ENSMUST00000178924 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm24702-201ENSMUST00000178965 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm24206-201ENSMUST00000179011 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm24528-201ENSMUST00000179164 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm22909-201ENSMUST00000179190 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm26334-201ENSMUST00000179403 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm25463-201ENSMUST00000179405 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm25742-201ENSMUST00000179530 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm25209-201ENSMUST00000179576 79 ntBASIC0,09□□□□□ -2,4
H2afb1S4R1E0 Gm26392-201ENSMUST00000179661 79 ntBASIC0,09□□□□□ -2,4
Retrieved 100 of 76,532 protein–RNA pairs in 9,5 ms