Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm26359-201ENSMUST00000158873 101 ntBASIC1.89□□□□□ -2.11
Nubp1Q9R060 Gm22413-201ENSMUST00000175465 85 ntBASIC1.89□□□□□ -2.11
Nubp1Q9R060 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Nubp1Q9R060 Gm24271-201ENSMUST00000102327 111 ntBASIC1.88□□□□□ -2.11
Nubp1Q9R060 Gm23109-201ENSMUST00000116867 126 ntBASIC1.88□□□□□ -2.11
Nubp1Q9R060 Gm25541-201ENSMUST00000116888 126 ntBASIC1.88□□□□□ -2.11
Nubp1Q9R060 Gm23991-201ENSMUST00000117033 93 ntBASIC1.88□□□□□ -2.11
Nubp1Q9R060 Gm24262-201ENSMUST00000157431 144 ntBASIC1.88□□□□□ -2.11
Nubp1Q9R060 Gm22083-201ENSMUST00000157586 102 ntBASIC1.88□□□□□ -2.11
Nubp1Q9R060 Mir497-201ENSMUST00000200557 84 ntBASIC1.88□□□□□ -2.11
Nubp1Q9R060 Gm26280-201ENSMUST00000157096 101 ntBASIC1.87□□□□□ -2.11
Nubp1Q9R060 Gm23500-201ENSMUST00000157735 98 ntBASIC1.87□□□□□ -2.11
Nubp1Q9R060 Gm24394-201ENSMUST00000158141 123 ntBASIC1.87□□□□□ -2.11
Nubp1Q9R060 Gm22406-201ENSMUST00000174923 93 ntBASIC1.87□□□□□ -2.11
Nubp1Q9R060 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.87□□□□□ -2.11
Nubp1Q9R060 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Nubp1Q9R060 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Nubp1Q9R060 Gm24983-201ENSMUST00000104457 69 ntBASIC1.86□□□□□ -2.11
Nubp1Q9R060 Gm24073-201ENSMUST00000158177 106 ntBASIC1.86□□□□□ -2.11
Nubp1Q9R060 Gm26029-201ENSMUST00000158659 132 ntBASIC1.86□□□□□ -2.11
Nubp1Q9R060 Gm24638-201ENSMUST00000179807 132 ntBASIC1.86□□□□□ -2.11
Nubp1Q9R060 Mir376b-201ENSMUST00000195930 82 ntBASIC1.86□□□□□ -2.11
Nubp1Q9R060 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Nubp1Q9R060 Gm24379-201ENSMUST00000122695 86 ntBASIC1.85□□□□□ -2.11
Nubp1Q9R060 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Nubp1Q9R060 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.84□□□□□ -2.11
Nubp1Q9R060 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Nubp1Q9R060 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Nubp1Q9R060 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.84□□□□□ -2.11
Nubp1Q9R060 Snord69-201ENSMUST00000104024 80 ntBASIC1.83□□□□□ -2.12
Nubp1Q9R060 Mir3096-201ENSMUST00000116685 71 ntBASIC1.83□□□□□ -2.12
Nubp1Q9R060 Snord2-201ENSMUST00000157899 69 ntBASIC1.83□□□□□ -2.12
Nubp1Q9R060 Gm22727-201ENSMUST00000158090 116 ntBASIC1.83□□□□□ -2.12
Nubp1Q9R060 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Nubp1Q9R060 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Nubp1Q9R060 Gm23477-201ENSMUST00000158882 128 ntBASIC1.82□□□□□ -2.12
Nubp1Q9R060 Mir100-201ENSMUST00000175270 80 ntBASIC1.82□□□□□ -2.12
Nubp1Q9R060 Mir3064-201ENSMUST00000175532 67 ntBASIC1.82□□□□□ -2.12
Nubp1Q9R060 Gm18433-201ENSMUST00000192747 197 ntBASIC1.82□□□□□ -2.12
Nubp1Q9R060 Gm24661-201ENSMUST00000083205 104 ntBASIC1.82□□□□□ -2.12
Nubp1Q9R060 Gm25756-201ENSMUST00000103990 136 ntBASIC1.81□□□□□ -2.12
Nubp1Q9R060 Gm22786-201ENSMUST00000104086 122 ntBASIC1.81□□□□□ -2.12
Nubp1Q9R060 Gm27544-201ENSMUST00000185069 155 ntBASIC1.81□□□□□ -2.12
Nubp1Q9R060 Gm38323-201ENSMUST00000192450 210 ntBASIC1.81□□□□□ -2.12
Nubp1Q9R060 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.81□□□□□ -2.12
Nubp1Q9R060 Mir377-201ENSMUST00000083504 68 ntBASIC1.81□□□□□ -2.12
Nubp1Q9R060 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Nubp1Q9R060 Gm22048-201ENSMUST00000104721 89 ntBASIC1.8□□□□□ -2.12
Nubp1Q9R060 Gm16510-201ENSMUST00000153501 249 ntBASIC1.8□□□□□ -2.12
Nubp1Q9R060 Gm22093-201ENSMUST00000158980 111 ntBASIC1.8□□□□□ -2.12
Nubp1Q9R060 Gm23813-201ENSMUST00000175153 77 ntBASIC1.8□□□□□ -2.12
Nubp1Q9R060 Mir6995-201ENSMUST00000183658 71 ntBASIC1.8□□□□□ -2.12
Nubp1Q9R060 Gm24134-201ENSMUST00000083361 71 ntBASIC1.8□□□□□ -2.12
Nubp1Q9R060 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
Nubp1Q9R060 Gm25040-201ENSMUST00000103877 66 ntBASIC1.79□□□□□ -2.12
Nubp1Q9R060 Gm25759-201ENSMUST00000103988 129 ntBASIC1.79□□□□□ -2.12
Nubp1Q9R060 Gm6272-201ENSMUST00000121256 171 ntBASIC1.79□□□□□ -2.12
Nubp1Q9R060 Gm24808-201ENSMUST00000157993 118 ntBASIC1.79□□□□□ -2.12
Nubp1Q9R060 Mir6352-201ENSMUST00000184495 116 ntBASIC1.78□□□□□ -2.12
Nubp1Q9R060 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.78□□□□□ -2.12
Nubp1Q9R060 Gm22652-201ENSMUST00000083207 131 ntBASIC1.78□□□□□ -2.12
Nubp1Q9R060 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Nubp1Q9R060 Mir741-201ENSMUST00000103931 71 ntBASIC1.77□□□□□ -2.13
Nubp1Q9R060 Gm25968-201ENSMUST00000157167 100 ntBASIC1.77□□□□□ -2.13
Nubp1Q9R060 Mir6901-201ENSMUST00000185062 62 ntBASIC1.77□□□□□ -2.13
Nubp1Q9R060 Mir500-201ENSMUST00000093600 92 ntBASIC1.77□□□□□ -2.13
Nubp1Q9R060 Gm24984-201ENSMUST00000104454 133 ntBASIC1.76□□□□□ -2.13
Nubp1Q9R060 Mir6342-201ENSMUST00000183870 125 ntBASIC1.76□□□□□ -2.13
Nubp1Q9R060 Gm27717-201ENSMUST00000183933 151 ntBASIC1.76□□□□□ -2.13
Nubp1Q9R060 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.76□□□□□ -2.13
Nubp1Q9R060 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.75□□□□□ -2.13
Nubp1Q9R060 Gm23336-201ENSMUST00000117023 123 ntBASIC1.75□□□□□ -2.13
Nubp1Q9R060 Gm13065-201ENSMUST00000119178 141 ntBASIC1.75□□□□□ -2.13
Nubp1Q9R060 Traj60-201ENSMUST00000167781 54 ntBASIC1.75□□□□□ -2.13
Nubp1Q9R060 Gm24154-201ENSMUST00000175261 130 ntBASIC1.75□□□□□ -2.13
Nubp1Q9R060 Gm16399-201ENSMUST00000181423 219 ntBASIC1.75□□□□□ -2.13
Nubp1Q9R060 Mir126a-201ENSMUST00000083606 73 ntBASIC1.75□□□□□ -2.13
Nubp1Q9R060 Mir876-201ENSMUST00000104659 81 ntBASIC1.74□□□□□ -2.13
Nubp1Q9R060 Mir873a-201ENSMUST00000104863 77 ntBASIC1.74□□□□□ -2.13
Nubp1Q9R060 Gm11857-201ENSMUST00000119817 324 ntBASIC1.74□□□□□ -2.13
Nubp1Q9R060 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Nubp1Q9R060 Mir1949-202ENSMUST00000199259 70 ntBASIC1.74□□□□□ -2.13
Nubp1Q9R060 Gm22233-201ENSMUST00000157464 114 ntBASIC1.73□□□□□ -2.13
Nubp1Q9R060 Gm25868-201ENSMUST00000158253 114 ntBASIC1.73□□□□□ -2.13
Nubp1Q9R060 Gm24770-201ENSMUST00000158505 92 ntBASIC1.73□□□□□ -2.13
Nubp1Q9R060 Gm22203-201ENSMUST00000158605 58 ntBASIC1.73□□□□□ -2.13
Nubp1Q9R060 Mir3079-201ENSMUST00000175428 90 ntBASIC1.73□□□□□ -2.13
Nubp1Q9R060 Gm23714-201ENSMUST00000179259 105 ntBASIC1.73□□□□□ -2.13
Nubp1Q9R060 Mir8119-201ENSMUST00000183371 129 ntBASIC1.73□□□□□ -2.13
Nubp1Q9R060 Mir7678-201ENSMUST00000185076 71 ntBASIC1.73□□□□□ -2.13
Nubp1Q9R060 Gm23267-201ENSMUST00000178490 132 ntBASIC1.72□□□□□ -2.13
Nubp1Q9R060 Mir7016-201ENSMUST00000184308 72 ntBASIC1.72□□□□□ -2.13
Nubp1Q9R060 Gm25832-201ENSMUST00000104140 130 ntBASIC1.71□□□□□ -2.14
Nubp1Q9R060 Gm25460-201ENSMUST00000157954 127 ntBASIC1.71□□□□□ -2.14
Nubp1Q9R060 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.71□□□□□ -2.14
Nubp1Q9R060 Gm25552-201ENSMUST00000158081 91 ntBASIC1.7□□□□□ -2.14
Nubp1Q9R060 Gm23853-201ENSMUST00000158375 104 ntBASIC1.7□□□□□ -2.14
Nubp1Q9R060 Gm28794-201ENSMUST00000185276 136 ntBASIC1.69□□□□□ -2.14
Nubp1Q9R060 Gm43911-201ENSMUST00000203097 76 ntBASIC1.69□□□□□ -2.14
Nubp1Q9R060 Gm45754-201ENSMUST00000212380 279 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 204.4 ms