Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Gm26274-201ENSMUST00000157103 321 ntBASIC1.18□□□□□ -2.22
Ldb3Q9JKS4 Gm24868-201ENSMUST00000157265 136 ntBASIC1.18□□□□□ -2.22
Ldb3Q9JKS4 Gm24199-201ENSMUST00000157808 136 ntBASIC1.18□□□□□ -2.22
Ldb3Q9JKS4 Gm22788-201ENSMUST00000157876 61 ntBASIC1.18□□□□□ -2.22
Ldb3Q9JKS4 Gm24808-201ENSMUST00000157993 118 ntBASIC1.18□□□□□ -2.22
Ldb3Q9JKS4 Gm24077-201ENSMUST00000158183 136 ntBASIC1.18□□□□□ -2.22
Ldb3Q9JKS4 Gm22466-201ENSMUST00000175278 69 ntBASIC1.18□□□□□ -2.22
Ldb3Q9JKS4 Gm28435-201ENSMUST00000185496 108 ntBASIC1.18□□□□□ -2.22
Ldb3Q9JKS4 Gm29047-201ENSMUST00000189816 108 ntBASIC1.18□□□□□ -2.22
Ldb3Q9JKS4 Gm24208-201ENSMUST00000082783 135 ntBASIC1.18□□□□□ -2.22
Ldb3Q9JKS4 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
Ldb3Q9JKS4 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Ldb3Q9JKS4 Snord69-201ENSMUST00000104024 80 ntBASIC1.17□□□□□ -2.22
Ldb3Q9JKS4 Gm23336-201ENSMUST00000117023 123 ntBASIC1.17□□□□□ -2.22
Ldb3Q9JKS4 Gm11333-201ENSMUST00000119479 148 ntBASIC1.17□□□□□ -2.22
Ldb3Q9JKS4 Gm24549-201ENSMUST00000158647 139 ntBASIC1.17□□□□□ -2.22
Ldb3Q9JKS4 Gm28794-201ENSMUST00000185276 136 ntBASIC1.17□□□□□ -2.22
Ldb3Q9JKS4 Mir3087-201ENSMUST00000199405 56 ntBASIC1.17□□□□□ -2.22
Ldb3Q9JKS4 Mir30a-201ENSMUST00000083471 71 ntBASIC1.17□□□□□ -2.22
Ldb3Q9JKS4 Gm25759-201ENSMUST00000103988 129 ntBASIC1.16□□□□□ -2.22
Ldb3Q9JKS4 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Ldb3Q9JKS4 Gm22233-201ENSMUST00000157464 114 ntBASIC1.16□□□□□ -2.22
Ldb3Q9JKS4 Gm25868-201ENSMUST00000158253 114 ntBASIC1.16□□□□□ -2.22
Ldb3Q9JKS4 Mir7063-201ENSMUST00000184158 91 ntBASIC1.16□□□□□ -2.22
Ldb3Q9JKS4 Mir211-201ENSMUST00000083651 106 ntBASIC1.16□□□□□ -2.22
Ldb3Q9JKS4 Mir500-201ENSMUST00000093600 92 ntBASIC1.16□□□□□ -2.22
Ldb3Q9JKS4 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Ldb3Q9JKS4 Gm22786-201ENSMUST00000104086 122 ntBASIC1.15□□□□□ -2.23
Ldb3Q9JKS4 Gm23237-201ENSMUST00000104639 92 ntBASIC1.15□□□□□ -2.23
Ldb3Q9JKS4 Gm25964-201ENSMUST00000157171 97 ntBASIC1.15□□□□□ -2.23
Ldb3Q9JKS4 Snord13-201ENSMUST00000157627 104 ntBASIC1.15□□□□□ -2.23
Ldb3Q9JKS4 Gm24311-201ENSMUST00000082570 104 ntBASIC1.15□□□□□ -2.23
Ldb3Q9JKS4 Gm26207-201ENSMUST00000082909 104 ntBASIC1.15□□□□□ -2.23
Ldb3Q9JKS4 Gm23291-201ENSMUST00000175611 78 ntBASIC1.14□□□□□ -2.23
Ldb3Q9JKS4 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.14□□□□□ -2.23
Ldb3Q9JKS4 Gm43038-201ENSMUST00000202359 88 ntBASIC1.14□□□□□ -2.23
Ldb3Q9JKS4 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.14□□□□□ -2.23
Ldb3Q9JKS4 Gm22541-201ENSMUST00000158165 127 ntBASIC1.13□□□□□ -2.23
Ldb3Q9JKS4 Gm24073-201ENSMUST00000158177 106 ntBASIC1.13□□□□□ -2.23
Ldb3Q9JKS4 Gm22011-201ENSMUST00000158790 123 ntBASIC1.13□□□□□ -2.23
Ldb3Q9JKS4 Mir100-201ENSMUST00000175270 80 ntBASIC1.13□□□□□ -2.23
Ldb3Q9JKS4 Gm38323-201ENSMUST00000192450 210 ntBASIC1.13□□□□□ -2.23
Ldb3Q9JKS4 Gm43907-201ENSMUST00000203128 117 ntBASIC1.13□□□□□ -2.23
Ldb3Q9JKS4 Gm23376-201ENSMUST00000082938 160 ntBASIC1.13□□□□□ -2.23
Ldb3Q9JKS4 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.12□□□□□ -2.23
Ldb3Q9JKS4 Gm24271-201ENSMUST00000102327 111 ntBASIC1.12□□□□□ -2.23
Ldb3Q9JKS4 Gm23991-201ENSMUST00000117033 93 ntBASIC1.12□□□□□ -2.23
Ldb3Q9JKS4 Gm11857-201ENSMUST00000119817 324 ntBASIC1.12□□□□□ -2.23
Ldb3Q9JKS4 Gm6272-201ENSMUST00000121256 171 ntBASIC1.12□□□□□ -2.23
Ldb3Q9JKS4 Gm25160-201ENSMUST00000158914 102 ntBASIC1.12□□□□□ -2.23
Ldb3Q9JKS4 Mir6342-201ENSMUST00000183870 125 ntBASIC1.12□□□□□ -2.23
Ldb3Q9JKS4 Gm44483-201ENSMUST00000197203 97 ntBASIC1.12□□□□□ -2.23
Ldb3Q9JKS4 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.12□□□□□ -2.23
Ldb3Q9JKS4 Gm24202-201ENSMUST00000082948 103 ntBASIC1.12□□□□□ -2.23
Ldb3Q9JKS4 Gm23570-201ENSMUST00000083029 104 ntBASIC1.12□□□□□ -2.23
Ldb3Q9JKS4 Mir377-201ENSMUST00000083504 68 ntBASIC1.12□□□□□ -2.23
Ldb3Q9JKS4 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Ldb3Q9JKS4 Gm24865-201ENSMUST00000103246 96 ntBASIC1.11□□□□□ -2.23
Ldb3Q9JKS4 Gm22539-201ENSMUST00000158167 117 ntBASIC1.11□□□□□ -2.23
Ldb3Q9JKS4 Mir3098-201ENSMUST00000175416 87 ntBASIC1.11□□□□□ -2.23
Ldb3Q9JKS4 Mir3079-201ENSMUST00000175428 90 ntBASIC1.11□□□□□ -2.23
Ldb3Q9JKS4 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
Ldb3Q9JKS4 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Ldb3Q9JKS4 Gm25495-201ENSMUST00000104431 131 ntBASIC1.1□□□□□ -2.23
Ldb3Q9JKS4 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.1□□□□□ -2.23
Ldb3Q9JKS4 Gm25622-201ENSMUST00000157217 104 ntBASIC1.1□□□□□ -2.23
Ldb3Q9JKS4 Gm22559-201ENSMUST00000157329 134 ntBASIC1.1□□□□□ -2.23
Ldb3Q9JKS4 Gm24500-201ENSMUST00000158447 124 ntBASIC1.1□□□□□ -2.23
Ldb3Q9JKS4 Gm25366-201ENSMUST00000158845 124 ntBASIC1.1□□□□□ -2.23
Ldb3Q9JKS4 Gm23306-201ENSMUST00000179058 105 ntBASIC1.1□□□□□ -2.23
Ldb3Q9JKS4 Gm23761-201ENSMUST00000158347 104 ntBASIC1.09□□□□□ -2.23
Ldb3Q9JKS4 Gm22203-201ENSMUST00000158605 58 ntBASIC1.09□□□□□ -2.23
Ldb3Q9JKS4 Gm24495-201ENSMUST00000178575 79 ntBASIC1.09□□□□□ -2.23
Ldb3Q9JKS4 Gm22253-201ENSMUST00000179870 79 ntBASIC1.09□□□□□ -2.23
Ldb3Q9JKS4 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.09□□□□□ -2.23
Ldb3Q9JKS4 Snora75-201ENSMUST00000082903 133 ntBASIC1.09□□□□□ -2.23
Ldb3Q9JKS4 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
Ldb3Q9JKS4 Gm26029-201ENSMUST00000158659 132 ntBASIC1.08□□□□□ -2.24
Ldb3Q9JKS4 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.08□□□□□ -2.24
Ldb3Q9JKS4 Gm26499-201ENSMUST00000178544 79 ntBASIC1.08□□□□□ -2.24
Ldb3Q9JKS4 Gm26096-201ENSMUST00000179084 79 ntBASIC1.08□□□□□ -2.24
Ldb3Q9JKS4 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.08□□□□□ -2.24
Ldb3Q9JKS4 Gm25870-201ENSMUST00000179845 79 ntBASIC1.07□□□□□ -2.24
Ldb3Q9JKS4 Gm27711-201ENSMUST00000183802 118 ntBASIC1.07□□□□□ -2.24
Ldb3Q9JKS4 Mir8090-201ENSMUST00000185078 136 ntBASIC1.07□□□□□ -2.24
Ldb3Q9JKS4 Gm20305-201ENSMUST00000193226 177 ntBASIC1.07□□□□□ -2.24
Ldb3Q9JKS4 Gm22980-201ENSMUST00000082608 70 ntBASIC1.07□□□□□ -2.24
Ldb3Q9JKS4 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Ldb3Q9JKS4 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
Ldb3Q9JKS4 Gm25756-201ENSMUST00000103990 136 ntBASIC1.06□□□□□ -2.24
Ldb3Q9JKS4 Gm25416-201ENSMUST00000104221 107 ntBASIC1.06□□□□□ -2.24
Ldb3Q9JKS4 Gm25619-201ENSMUST00000122621 104 ntBASIC1.06□□□□□ -2.24
Ldb3Q9JKS4 Gm22485-201ENSMUST00000157990 109 ntBASIC1.06□□□□□ -2.24
Ldb3Q9JKS4 Gm26359-201ENSMUST00000158873 101 ntBASIC1.06□□□□□ -2.24
Ldb3Q9JKS4 Mir376b-201ENSMUST00000195930 82 ntBASIC1.06□□□□□ -2.24
Ldb3Q9JKS4 Gm25798-201ENSMUST00000082641 107 ntBASIC1.06□□□□□ -2.24
Ldb3Q9JKS4 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.06□□□□□ -2.24
Ldb3Q9JKS4 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Ldb3Q9JKS4 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.05□□□□□ -2.24
Ldb3Q9JKS4 Gm25040-201ENSMUST00000103877 66 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 207.9 ms