Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm23504-201ENSMUST00000158988 95 ntBASIC-0.82□□□□□ -2.54
Trem1Q9JKE2 Gm25618-201ENSMUST00000179484 107 ntBASIC-0.82□□□□□ -2.54
Trem1Q9JKE2 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
Trem1Q9JKE2 Gm25275-201ENSMUST00000104297 129 ntBASIC-0.83□□□□□ -2.54
Trem1Q9JKE2 Gm24983-201ENSMUST00000104457 69 ntBASIC-0.83□□□□□ -2.54
Trem1Q9JKE2 Gm22139-201ENSMUST00000158747 105 ntBASIC-0.83□□□□□ -2.54
Trem1Q9JKE2 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.83□□□□□ -2.54
Trem1Q9JKE2 Gm26426-201ENSMUST00000177866 123 ntBASIC-0.83□□□□□ -2.54
Trem1Q9JKE2 Gm26060-201ENSMUST00000180094 123 ntBASIC-0.83□□□□□ -2.54
Trem1Q9JKE2 Gm27699-201ENSMUST00000183553 180 ntBASIC-0.83□□□□□ -2.54
Trem1Q9JKE2 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC-0.83□□□□□ -2.54
Trem1Q9JKE2 Snora62-201ENSMUST00000082991 149 ntBASIC-0.83□□□□□ -2.54
Trem1Q9JKE2 Gm23239-201ENSMUST00000083006 181 ntBASIC-0.83□□□□□ -2.54
Trem1Q9JKE2 Gm24649-201ENSMUST00000157106 134 ntBASIC-0.84□□□□□ -2.54
Trem1Q9JKE2 Gm23901-201ENSMUST00000157570 107 ntBASIC-0.84□□□□□ -2.54
Trem1Q9JKE2 Gm22606-201ENSMUST00000158290 103 ntBASIC-0.84□□□□□ -2.54
Trem1Q9JKE2 Gm23351-201ENSMUST00000158427 125 ntBASIC-0.84□□□□□ -2.54
Trem1Q9JKE2 Gm24054-201ENSMUST00000158619 105 ntBASIC-0.84□□□□□ -2.54
Trem1Q9JKE2 Gm23337-201ENSMUST00000158959 118 ntBASIC-0.84□□□□□ -2.54
Trem1Q9JKE2 mt-Ts2-201ENSMUST00000082416 59 ntBASIC-0.84□□□□□ -2.54
Trem1Q9JKE2 Snord90-201ENSMUST00000104568 111 ntBASIC-0.85□□□□□ -2.55
Trem1Q9JKE2 Gm22373-201ENSMUST00000104584 89 ntBASIC-0.85□□□□□ -2.55
Trem1Q9JKE2 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.85□□□□□ -2.55
Trem1Q9JKE2 Gm26091-201ENSMUST00000122704 82 ntBASIC-0.85□□□□□ -2.55
Trem1Q9JKE2 Gm22989-201ENSMUST00000158313 86 ntBASIC-0.85□□□□□ -2.55
Trem1Q9JKE2 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.85□□□□□ -2.55
Trem1Q9JKE2 AC126939.1-201ENSMUST00000224943 226 ntBASIC-0.85□□□□□ -2.55
Trem1Q9JKE2 Gm25482-201ENSMUST00000083225 107 ntBASIC-0.85□□□□□ -2.55
Trem1Q9JKE2 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.85□□□□□ -2.55
Trem1Q9JKE2 Gm23947-201ENSMUST00000093636 107 ntBASIC-0.85□□□□□ -2.55
Trem1Q9JKE2 Gm24913-201ENSMUST00000157286 107 ntBASIC-0.86□□□□□ -2.55
Trem1Q9JKE2 Gm22336-201ENSMUST00000157719 107 ntBASIC-0.86□□□□□ -2.55
Trem1Q9JKE2 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.86□□□□□ -2.55
Trem1Q9JKE2 Gm22406-201ENSMUST00000174923 93 ntBASIC-0.86□□□□□ -2.55
Trem1Q9JKE2 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.86□□□□□ -2.55
Trem1Q9JKE2 Gm37796-201ENSMUST00000195327 134 ntBASIC-0.86□□□□□ -2.55
Trem1Q9JKE2 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.86□□□□□ -2.55
Trem1Q9JKE2 Gm25635-201ENSMUST00000082675 131 ntBASIC-0.86□□□□□ -2.55
Trem1Q9JKE2 Gm24202-201ENSMUST00000082948 103 ntBASIC-0.86□□□□□ -2.55
Trem1Q9JKE2 Mir29a-201ENSMUST00000083676 88 ntBASIC-0.86□□□□□ -2.55
Trem1Q9JKE2 Gm23344-201ENSMUST00000083818 68 ntBASIC-0.86□□□□□ -2.55
Trem1Q9JKE2 Gm23986-201ENSMUST00000157144 63 ntBASIC-0.87□□□□□ -2.55
Trem1Q9JKE2 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.87□□□□□ -2.55
Trem1Q9JKE2 Mir466e-201ENSMUST00000198862 84 ntBASIC-0.87□□□□□ -2.55
Trem1Q9JKE2 Mir466c-1-201ENSMUST00000200654 84 ntBASIC-0.87□□□□□ -2.55
Trem1Q9JKE2 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.87□□□□□ -2.55
Trem1Q9JKE2 Gm25091-201ENSMUST00000103997 71 ntBASIC-0.88□□□□□ -2.55
Trem1Q9JKE2 Gm23258-201ENSMUST00000158319 106 ntBASIC-0.88□□□□□ -2.55
Trem1Q9JKE2 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.88□□□□□ -2.55
Trem1Q9JKE2 Gm23601-201ENSMUST00000157259 131 ntBASIC-0.89□□□□□ -2.55
Trem1Q9JKE2 Gm22675-201ENSMUST00000158430 104 ntBASIC-0.89□□□□□ -2.55
Trem1Q9JKE2 Gm25367-201ENSMUST00000158846 106 ntBASIC-0.89□□□□□ -2.55
Trem1Q9JKE2 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.89□□□□□ -2.55
Trem1Q9JKE2 Mir509-201ENSMUST00000196089 75 ntBASIC-0.89□□□□□ -2.55
Trem1Q9JKE2 Gm24461-201ENSMUST00000082735 103 ntBASIC-0.89□□□□□ -2.55
Trem1Q9JKE2 Gm26168-201ENSMUST00000083787 112 ntBASIC-0.89□□□□□ -2.55
Trem1Q9JKE2 Gm24522-201ENSMUST00000083964 108 ntBASIC-0.89□□□□□ -2.55
Trem1Q9JKE2 Mir471-201ENSMUST00000093596 67 ntBASIC-0.89□□□□□ -2.55
Trem1Q9JKE2 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.9□□□□□ -2.55
Trem1Q9JKE2 Gm26478-201ENSMUST00000122611 133 ntBASIC-0.9□□□□□ -2.55
Trem1Q9JKE2 Mir669j-201ENSMUST00000179023 121 ntBASIC-0.9□□□□□ -2.55
Trem1Q9JKE2 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.9□□□□□ -2.55
Trem1Q9JKE2 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.9□□□□□ -2.55
Trem1Q9JKE2 Mir574-201ENSMUST00000103854 78 ntBASIC-0.91□□□□□ -2.56
Trem1Q9JKE2 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.91□□□□□ -2.56
Trem1Q9JKE2 Gm22031-201ENSMUST00000116945 126 ntBASIC-0.91□□□□□ -2.56
Trem1Q9JKE2 Gm26084-201ENSMUST00000157903 104 ntBASIC-0.91□□□□□ -2.56
Trem1Q9JKE2 Gm24877-201ENSMUST00000158779 116 ntBASIC-0.91□□□□□ -2.56
Trem1Q9JKE2 Mir1966-201ENSMUST00000158807 108 ntBASIC-0.91□□□□□ -2.56
Trem1Q9JKE2 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.91□□□□□ -2.56
Trem1Q9JKE2 Gm24064-201ENSMUST00000157486 106 ntBASIC-0.92□□□□□ -2.56
Trem1Q9JKE2 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.92□□□□□ -2.56
Trem1Q9JKE2 Gm42677-201ENSMUST00000196363 127 ntBASIC-0.92□□□□□ -2.56
Trem1Q9JKE2 Mir466b-8-201ENSMUST00000103883 86 ntBASIC-0.93□□□□□ -2.56
Trem1Q9JKE2 Gm23065-201ENSMUST00000158236 130 ntBASIC-0.93□□□□□ -2.56
Trem1Q9JKE2 Gm22503-201ENSMUST00000158983 115 ntBASIC-0.93□□□□□ -2.56
Trem1Q9JKE2 Gm22699-201ENSMUST00000175376 105 ntBASIC-0.93□□□□□ -2.56
Trem1Q9JKE2 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-0.93□□□□□ -2.56
Trem1Q9JKE2 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.94□□□□□ -2.56
Trem1Q9JKE2 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.94□□□□□ -2.56
Trem1Q9JKE2 Gm22732-201ENSMUST00000158093 121 ntBASIC-0.94□□□□□ -2.56
Trem1Q9JKE2 Mir466b-1-201ENSMUST00000177988 82 ntBASIC-0.94□□□□□ -2.56
Trem1Q9JKE2 Gm8034-201ENSMUST00000178853 132 ntBASIC-0.94□□□□□ -2.56
Trem1Q9JKE2 Gm37889-201ENSMUST00000194174 251 ntBASIC-0.94□□□□□ -2.56
Trem1Q9JKE2 Gm23378-201ENSMUST00000082942 107 ntBASIC-0.94□□□□□ -2.56
Trem1Q9JKE2 Gm23461-201ENSMUST00000083265 107 ntBASIC-0.94□□□□□ -2.56
Trem1Q9JKE2 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC-0.94□□□□□ -2.56
Trem1Q9JKE2 Snord80-201ENSMUST00000083801 81 ntBASIC-0.94□□□□□ -2.56
Trem1Q9JKE2 Gm24131-201ENSMUST00000158539 107 ntBASIC-0.95□□□□□ -2.56
Trem1Q9JKE2 Gm22708-201ENSMUST00000158987 103 ntBASIC-0.95□□□□□ -2.56
Trem1Q9JKE2 Gm44409-201ENSMUST00000198810 166 ntBASIC-0.95□□□□□ -2.56
Trem1Q9JKE2 Gm23977-201ENSMUST00000177871 74 ntBASIC-0.96□□□□□ -2.56
Trem1Q9JKE2 Gm22259-201ENSMUST00000178926 107 ntBASIC-0.96□□□□□ -2.56
Trem1Q9JKE2 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.96□□□□□ -2.56
Trem1Q9JKE2 AC157602.1-201ENSMUST00000197446 105 ntBASIC-0.96□□□□□ -2.56
Trem1Q9JKE2 Gm22772-201ENSMUST00000104451 121 ntBASIC-0.97□□□□□ -2.56
Trem1Q9JKE2 Gm23500-201ENSMUST00000157735 98 ntBASIC-0.97□□□□□ -2.56
Trem1Q9JKE2 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC-0.97□□□□□ -2.56
Trem1Q9JKE2 Gm25716-201ENSMUST00000158628 104 ntBASIC-0.98□□□□□ -2.57
Trem1Q9JKE2 Gm22638-201ENSMUST00000179674 107 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms