Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm24167-201ENSMUST00000177733 124 ntBASIC0.41□□□□□ -2.34
Trim54Q9ERP3 Gm24028-201ENSMUST00000178991 124 ntBASIC0.41□□□□□ -2.34
Trim54Q9ERP3 Gm45197-201ENSMUST00000205288 151 ntBASIC0.41□□□□□ -2.34
Trim54Q9ERP3 Gm22759-201ENSMUST00000102276 96 ntBASIC0.4□□□□□ -2.35
Trim54Q9ERP3 Gm23020-201ENSMUST00000158766 253 ntBASIC0.4□□□□□ -2.35
Trim54Q9ERP3 Mir7077-201ENSMUST00000183991 57 ntBASIC0.4□□□□□ -2.35
Trim54Q9ERP3 Gm22303-201ENSMUST00000082686 122 ntBASIC0.4□□□□□ -2.35
Trim54Q9ERP3 Gm23138-201ENSMUST00000083365 103 ntBASIC0.4□□□□□ -2.35
Trim54Q9ERP3 Snord80-201ENSMUST00000083801 81 ntBASIC0.4□□□□□ -2.35
Trim54Q9ERP3 Gm22706-201ENSMUST00000157907 112 ntBASIC0.39□□□□□ -2.35
Trim54Q9ERP3 Gm22212-201ENSMUST00000158096 106 ntBASIC0.39□□□□□ -2.35
Trim54Q9ERP3 Gm25014-201ENSMUST00000158401 103 ntBASIC0.39□□□□□ -2.35
Trim54Q9ERP3 Gm24208-201ENSMUST00000082783 135 ntBASIC0.39□□□□□ -2.35
Trim54Q9ERP3 Mir369-201ENSMUST00000083627 79 ntBASIC0.39□□□□□ -2.35
Trim54Q9ERP3 Gm23344-201ENSMUST00000083818 68 ntBASIC0.39□□□□□ -2.35
Trim54Q9ERP3 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.39□□□□□ -2.35
Trim54Q9ERP3 Gm22319-201ENSMUST00000157147 122 ntBASIC0.38□□□□□ -2.35
Trim54Q9ERP3 Gm25428-201ENSMUST00000157608 114 ntBASIC0.38□□□□□ -2.35
Trim54Q9ERP3 Gm24926-201ENSMUST00000178053 79 ntBASIC0.38□□□□□ -2.35
Trim54Q9ERP3 Gm22632-201ENSMUST00000178266 79 ntBASIC0.38□□□□□ -2.35
Trim54Q9ERP3 AC158982.2-201ENSMUST00000226283 184 ntBASIC0.38□□□□□ -2.35
Trim54Q9ERP3 Mir141-201ENSMUST00000083540 72 ntBASIC0.38□□□□□ -2.35
Trim54Q9ERP3 Mir224-201ENSMUST00000083608 82 ntBASIC0.38□□□□□ -2.35
Trim54Q9ERP3 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.38□□□□□ -2.35
Trim54Q9ERP3 Snord78-201ENSMUST00000104032 66 ntBASIC0.37□□□□□ -2.35
Trim54Q9ERP3 Gm22048-201ENSMUST00000104721 89 ntBASIC0.37□□□□□ -2.35
Trim54Q9ERP3 Gm24648-201ENSMUST00000157111 132 ntBASIC0.37□□□□□ -2.35
Trim54Q9ERP3 Gm23065-201ENSMUST00000158236 130 ntBASIC0.37□□□□□ -2.35
Trim54Q9ERP3 Gm25920-201ENSMUST00000158307 99 ntBASIC0.37□□□□□ -2.35
Trim54Q9ERP3 Gm23966-201ENSMUST00000179823 107 ntBASIC0.37□□□□□ -2.35
Trim54Q9ERP3 Gm26454-201ENSMUST00000082682 107 ntBASIC0.37□□□□□ -2.35
Trim54Q9ERP3 Gm24468-201ENSMUST00000104489 104 ntBASIC0.36□□□□□ -2.35
Trim54Q9ERP3 Gm24399-201ENSMUST00000157869 74 ntBASIC0.36□□□□□ -2.35
Trim54Q9ERP3 Gm26116-201ENSMUST00000175600 77 ntBASIC0.36□□□□□ -2.35
Trim54Q9ERP3 Mir6896-201ENSMUST00000198033 73 ntBASIC0.36□□□□□ -2.35
Trim54Q9ERP3 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.36□□□□□ -2.35
Trim54Q9ERP3 Mir670-201ENSMUST00000102380 100 ntBASIC0.35□□□□□ -2.35
Trim54Q9ERP3 Gm24947-201ENSMUST00000158334 110 ntBASIC0.35□□□□□ -2.35
Trim54Q9ERP3 Gm25812-201ENSMUST00000082751 103 ntBASIC0.35□□□□□ -2.35
Trim54Q9ERP3 Gm22031-201ENSMUST00000116945 126 ntBASIC0.34□□□□□ -2.36
Trim54Q9ERP3 Gm24894-201ENSMUST00000122744 118 ntBASIC0.34□□□□□ -2.36
Trim54Q9ERP3 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.34□□□□□ -2.36
Trim54Q9ERP3 Gm27475-201ENSMUST00000183420 61 ntBASIC0.34□□□□□ -2.36
Trim54Q9ERP3 Mir7065-201ENSMUST00000185110 61 ntBASIC0.34□□□□□ -2.36
Trim54Q9ERP3 Gm25408-201ENSMUST00000104104 133 ntBASIC0.33□□□□□ -2.36
Trim54Q9ERP3 Gm24916-201ENSMUST00000157287 79 ntBASIC0.33□□□□□ -2.36
Trim54Q9ERP3 Gm38295-201ENSMUST00000191951 151 ntBASIC0.33□□□□□ -2.36
Trim54Q9ERP3 Gm42845-201ENSMUST00000197766 105 ntBASIC0.32□□□□□ -2.36
Trim54Q9ERP3 Gm25635-201ENSMUST00000082675 131 ntBASIC0.32□□□□□ -2.36
Trim54Q9ERP3 Gm26207-201ENSMUST00000082909 104 ntBASIC0.32□□□□□ -2.36
Trim54Q9ERP3 Mir7-1-201ENSMUST00000083500 108 ntBASIC0.32□□□□□ -2.36
Trim54Q9ERP3 Scarna8-201ENSMUST00000158333 131 ntBASIC0.31□□□□□ -2.36
Trim54Q9ERP3 Gm44327-201ENSMUST00000200068 117 ntBASIC0.31□□□□□ -2.36
Trim54Q9ERP3 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.31□□□□□ -2.36
Trim54Q9ERP3 Mir710-201ENSMUST00000102088 110 ntBASIC0.3□□□□□ -2.36
Trim54Q9ERP3 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Trim54Q9ERP3 Gm24381-201ENSMUST00000122697 104 ntBASIC0.3□□□□□ -2.36
Trim54Q9ERP3 Gm26152-201ENSMUST00000157427 101 ntBASIC0.3□□□□□ -2.36
Trim54Q9ERP3 Gm24686-201ENSMUST00000157755 93 ntBASIC0.3□□□□□ -2.36
Trim54Q9ERP3 Gm43907-201ENSMUST00000203128 117 ntBASIC0.3□□□□□ -2.36
Trim54Q9ERP3 Gm43977-201ENSMUST00000203970 189 ntBASIC0.3□□□□□ -2.36
Trim54Q9ERP3 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.3□□□□□ -2.36
Trim54Q9ERP3 Gm25885-201ENSMUST00000157779 109 ntBASIC0.29□□□□□ -2.36
Trim54Q9ERP3 Gm23036-201ENSMUST00000157885 99 ntBASIC0.29□□□□□ -2.36
Trim54Q9ERP3 Gm25366-201ENSMUST00000158845 124 ntBASIC0.29□□□□□ -2.36
Trim54Q9ERP3 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.29□□□□□ -2.36
Trim54Q9ERP3 Gm25370-201ENSMUST00000158159 94 ntBASIC0.28□□□□□ -2.36
Trim54Q9ERP3 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.28□□□□□ -2.36
Trim54Q9ERP3 Gm23749-201ENSMUST00000104223 131 ntBASIC0.27□□□□□ -2.37
Trim54Q9ERP3 Gm24793-201ENSMUST00000104289 132 ntBASIC0.27□□□□□ -2.37
Trim54Q9ERP3 Gm24833-201ENSMUST00000116775 120 ntBASIC0.27□□□□□ -2.37
Trim54Q9ERP3 Gm25753-201ENSMUST00000116792 121 ntBASIC0.27□□□□□ -2.37
Trim54Q9ERP3 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.27□□□□□ -2.37
Trim54Q9ERP3 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.27□□□□□ -2.37
Trim54Q9ERP3 Mir3089-201ENSMUST00000175350 84 ntBASIC0.27□□□□□ -2.37
Trim54Q9ERP3 Gm25646-201ENSMUST00000178527 79 ntBASIC0.27□□□□□ -2.37
Trim54Q9ERP3 Gm23653-201ENSMUST00000116751 97 ntBASIC0.26□□□□□ -2.37
Trim54Q9ERP3 Gm23291-201ENSMUST00000175611 78 ntBASIC0.26□□□□□ -2.37
Trim54Q9ERP3 Gm22509-201ENSMUST00000082775 107 ntBASIC0.26□□□□□ -2.37
Trim54Q9ERP3 Gm25678-201ENSMUST00000174984 73 ntBASIC0.25□□□□□ -2.37
Trim54Q9ERP3 Gm26712-201ENSMUST00000180813 217 ntBASIC0.25□□□□□ -2.37
Trim54Q9ERP3 Gm22055-201ENSMUST00000083388 107 ntBASIC0.25□□□□□ -2.37
Trim54Q9ERP3 Snord2-201ENSMUST00000157899 69 ntBASIC0.24□□□□□ -2.37
Trim54Q9ERP3 Gm22100-201ENSMUST00000157926 63 ntBASIC0.24□□□□□ -2.37
Trim54Q9ERP3 Mir3108-201ENSMUST00000175500 79 ntBASIC0.24□□□□□ -2.37
Trim54Q9ERP3 Mir6904-201ENSMUST00000183443 67 ntBASIC0.24□□□□□ -2.37
Trim54Q9ERP3 Gm23012-201ENSMUST00000104149 83 ntBASIC0.23□□□□□ -2.37
Trim54Q9ERP3 Gm44345-201ENSMUST00000199560 135 ntBASIC0.23□□□□□ -2.37
Trim54Q9ERP3 Mir18-201ENSMUST00000083469 96 ntBASIC0.23□□□□□ -2.37
Trim54Q9ERP3 Mir29a-201ENSMUST00000083676 88 ntBASIC0.23□□□□□ -2.37
Trim54Q9ERP3 Gm25756-201ENSMUST00000103990 136 ntBASIC0.22□□□□□ -2.37
Trim54Q9ERP3 Gm28001-201ENSMUST00000183561 117 ntBASIC0.22□□□□□ -2.37
Trim54Q9ERP3 Mir6365-201ENSMUST00000183990 101 ntBASIC0.22□□□□□ -2.37
Trim54Q9ERP3 Gm44803-201ENSMUST00000204384 156 ntBASIC0.22□□□□□ -2.37
Trim54Q9ERP3 Gm22070-201ENSMUST00000178475 107 ntBASIC0.21□□□□□ -2.38
Trim54Q9ERP3 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC0.21□□□□□ -2.38
Trim54Q9ERP3 Gm25337-201ENSMUST00000083723 104 ntBASIC0.21□□□□□ -2.38
Trim54Q9ERP3 Gm26478-201ENSMUST00000122611 133 ntBASIC0.2□□□□□ -2.38
Trim54Q9ERP3 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.2□□□□□ -2.38
Trim54Q9ERP3 Mir466-201ENSMUST00000093591 73 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 298.7 ms