Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm23209-201ENSMUST00000158667 110 ntBASIC-0,34□□□□□ -2,46
Scn4aQ9ER60 Gm38295-201ENSMUST00000191951 151 ntBASIC-0,34□□□□□ -2,46
Scn4aQ9ER60 Gm24054-201ENSMUST00000158619 105 ntBASIC-0,35□□□□□ -2,47
Scn4aQ9ER60 Gm26007-201ENSMUST00000158798 120 ntBASIC-0,35□□□□□ -2,47
Scn4aQ9ER60 Gm25249-201ENSMUST00000175471 78 ntBASIC-0,35□□□□□ -2,47
Scn4aQ9ER60 Gm25756-201ENSMUST00000103990 136 ntBASIC-0,36□□□□□ -2,47
Scn4aQ9ER60 Gm25056-201ENSMUST00000157372 62 ntBASIC-0,36□□□□□ -2,47
Scn4aQ9ER60 Gm25060-201ENSMUST00000157374 130 ntBASIC-0,36□□□□□ -2,47
Scn4aQ9ER60 Mir327-201ENSMUST00000199328 69 ntBASIC-0,36□□□□□ -2,47
Scn4aQ9ER60 Gm18502-201ENSMUST00000218679 199 ntBASIC-0,36□□□□□ -2,47
Scn4aQ9ER60 Mir183-201ENSMUST00000083685 70 ntBASIC-0,36□□□□□ -2,47
Scn4aQ9ER60 Mir669b-201ENSMUST00000102172 97 ntBASIC-0,36□□□□□ -2,47
Scn4aQ9ER60 Gm24399-201ENSMUST00000157869 74 ntBASIC-0,36□□□□□ -2,47
Scn4aQ9ER60 Gm24843-201ENSMUST00000158682 76 ntBASIC-0,36□□□□□ -2,47
Scn4aQ9ER60 Gm26498-201ENSMUST00000177799 79 ntBASIC-0,36□□□□□ -2,47
Scn4aQ9ER60 Gm26230-201ENSMUST00000180141 79 ntBASIC-0,36□□□□□ -2,47
Scn4aQ9ER60 AC151902.2-201ENSMUST00000226419 301 ntBASIC-0,36□□□□□ -2,47
Scn4aQ9ER60 Gm25149-201ENSMUST00000157119 82 ntBASIC-0,37□□□□□ -2,47
Scn4aQ9ER60 Gm24106-201ENSMUST00000175498 127 ntBASIC-0,37□□□□□ -2,47
Scn4aQ9ER60 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0,37□□□□□ -2,47
Scn4aQ9ER60 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0,38□□□□□ -2,47
Scn4aQ9ER60 Mir764-201ENSMUST00000103259 108 ntBASIC-0,38□□□□□ -2,47
Scn4aQ9ER60 Gm22324-201ENSMUST00000158903 114 ntBASIC-0,38□□□□□ -2,47
Scn4aQ9ER60 Gm22708-201ENSMUST00000158987 103 ntBASIC-0,38□□□□□ -2,47
Scn4aQ9ER60 Mir669j-201ENSMUST00000179023 121 ntBASIC-0,38□□□□□ -2,47
Scn4aQ9ER60 Gm26091-201ENSMUST00000122704 82 ntBASIC-0,38□□□□□ -2,47
Scn4aQ9ER60 Gm14947-201ENSMUST00000133704 303 ntBASIC-0,38□□□□□ -2,47
Scn4aQ9ER60 Gm25366-201ENSMUST00000158845 124 ntBASIC-0,38□□□□□ -2,47
Scn4aQ9ER60 Gm25328-201ENSMUST00000175013 107 ntBASIC-0,38□□□□□ -2,47
Scn4aQ9ER60 Gm25032-201ENSMUST00000175411 84 ntBASIC-0,38□□□□□ -2,47
Scn4aQ9ER60 Gm22607-201ENSMUST00000158291 105 ntBASIC-0,4□□□□□ -2,47
Scn4aQ9ER60 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC-0,4□□□□□ -2,47
Scn4aQ9ER60 Gm25410-201ENSMUST00000083758 137 ntBASIC-0,4□□□□□ -2,47
Scn4aQ9ER60 Gm25315-201ENSMUST00000116823 121 ntBASIC-0,41□□□□□ -2,47
Scn4aQ9ER60 Gm22196-201ENSMUST00000116865 109 ntBASIC-0,41□□□□□ -2,47
Scn4aQ9ER60 Gm22454-201ENSMUST00000082583 107 ntBASIC-0,41□□□□□ -2,47
Scn4aQ9ER60 Gm24374-201ENSMUST00000104394 106 ntBASIC-0,41□□□□□ -2,48
Scn4aQ9ER60 Gm23314-201ENSMUST00000157218 107 ntBASIC-0,41□□□□□ -2,48
Scn4aQ9ER60 Gm26210-201ENSMUST00000158680 91 ntBASIC-0,41□□□□□ -2,48
Scn4aQ9ER60 Gm23159-201ENSMUST00000175088 77 ntBASIC-0,41□□□□□ -2,48
Scn4aQ9ER60 Gm22542-201ENSMUST00000158166 95 ntBASIC-0,42□□□□□ -2,48
Scn4aQ9ER60 Gm24457-201ENSMUST00000083196 105 ntBASIC-0,42□□□□□ -2,48
Scn4aQ9ER60 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0,43□□□□□ -2,48
Scn4aQ9ER60 Gm24686-201ENSMUST00000157755 93 ntBASIC-0,43□□□□□ -2,48
Scn4aQ9ER60 Gm24141-201ENSMUST00000122776 115 ntBASIC-0,43□□□□□ -2,48
Scn4aQ9ER60 Gm23852-201ENSMUST00000158376 77 ntBASIC-0,43□□□□□ -2,48
Scn4aQ9ER60 Gm23990-201ENSMUST00000117031 117 ntBASIC-0,44□□□□□ -2,48
Scn4aQ9ER60 Gm27610-201ENSMUST00000184026 74 ntBASIC-0,44□□□□□ -2,48
Scn4aQ9ER60 Mir21b-201ENSMUST00000184317 108 ntBASIC-0,44□□□□□ -2,48
Scn4aQ9ER60 Gm24983-201ENSMUST00000104457 69 ntBASIC-0,45□□□□□ -2,48
Scn4aQ9ER60 Gm27694-201ENSMUST00000184740 86 ntBASIC-0,45□□□□□ -2,48
Scn4aQ9ER60 mt-Tw-201ENSMUST00000082397 67 ntBASIC-0,45□□□□□ -2,48
Scn4aQ9ER60 Gm23722-201ENSMUST00000083002 130 ntBASIC-0,45□□□□□ -2,48
Scn4aQ9ER60 Gm25680-201ENSMUST00000116917 126 ntBASIC-0,45□□□□□ -2,48
Scn4aQ9ER60 Gm22635-201ENSMUST00000116962 126 ntBASIC-0,45□□□□□ -2,48
Scn4aQ9ER60 Mup-ps5-201ENSMUST00000118667 99 ntBASIC-0,45□□□□□ -2,48
Scn4aQ9ER60 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0,45□□□□□ -2,48
Scn4aQ9ER60 Mir7038-201ENSMUST00000184833 71 ntBASIC-0,45□□□□□ -2,48
Scn4aQ9ER60 AC157602.1-201ENSMUST00000197446 105 ntBASIC-0,45□□□□□ -2,48
Scn4aQ9ER60 mt-Ts2-201ENSMUST00000082416 59 ntBASIC-0,45□□□□□ -2,48
Scn4aQ9ER60 Gm22558-201ENSMUST00000157326 95 ntBASIC-0,46□□□□□ -2,48
Scn4aQ9ER60 Gm25370-201ENSMUST00000158159 94 ntBASIC-0,46□□□□□ -2,48
Scn4aQ9ER60 Gm25522-201ENSMUST00000158394 105 ntBASIC-0,46□□□□□ -2,48
Scn4aQ9ER60 Gm22638-201ENSMUST00000179674 107 ntBASIC-0,46□□□□□ -2,48
Scn4aQ9ER60 Gm27851-201ENSMUST00000183529 63 ntBASIC-0,46□□□□□ -2,48
Scn4aQ9ER60 Snord64-201ENSMUST00000104003 67 ntBASIC-0,47□□□□□ -2,48
Scn4aQ9ER60 Gm24868-201ENSMUST00000157265 136 ntBASIC-0,47□□□□□ -2,48
Scn4aQ9ER60 Gm22212-201ENSMUST00000158096 106 ntBASIC-0,47□□□□□ -2,48
Scn4aQ9ER60 Gm24077-201ENSMUST00000158183 136 ntBASIC-0,47□□□□□ -2,48
Scn4aQ9ER60 Gm25160-201ENSMUST00000158914 102 ntBASIC-0,47□□□□□ -2,48
Scn4aQ9ER60 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-0,47□□□□□ -2,48
Scn4aQ9ER60 Gm45492-201ENSMUST00000211611 288 ntBASIC-0,47□□□□□ -2,48
Scn4aQ9ER60 Snord67-201ENSMUST00000104033 111 ntBASIC-0,48□□□□□ -2,49
Scn4aQ9ER60 Gm14837-201ENSMUST00000119688 206 ntBASIC-0,48□□□□□ -2,49
Scn4aQ9ER60 Gm25899-201ENSMUST00000082672 141 ntBASIC-0,48□□□□□ -2,49
Scn4aQ9ER60 Gm23864-201ENSMUST00000177607 107 ntBASIC-0,48□□□□□ -2,49
Scn4aQ9ER60 Gm22621-201ENSMUST00000179678 74 ntBASIC-0,48□□□□□ -2,49
Scn4aQ9ER60 mt-Tn-201ENSMUST00000082399 71 ntBASIC-0,48□□□□□ -2,49
Scn4aQ9ER60 Gm22089-201ENSMUST00000158336 102 ntBASIC-0,49□□□□□ -2,49
Scn4aQ9ER60 Gm24823-201ENSMUST00000175092 91 ntBASIC-0,49□□□□□ -2,49
Scn4aQ9ER60 Snora26-201ENSMUST00000175614 121 ntBASIC-0,49□□□□□ -2,49
Scn4aQ9ER60 Gm25388-201ENSMUST00000157339 151 ntBASIC-0,5□□□□□ -2,49
Scn4aQ9ER60 Gm27699-201ENSMUST00000183553 180 ntBASIC-0,5□□□□□ -2,49
Scn4aQ9ER60 Mir802-201ENSMUST00000103258 97 ntBASIC-0,5□□□□□ -2,49
Scn4aQ9ER60 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC-0,5□□□□□ -2,49
Scn4aQ9ER60 Gm23423-201ENSMUST00000082782 106 ntBASIC-0,5□□□□□ -2,49
Scn4aQ9ER60 Gm25091-201ENSMUST00000103997 71 ntBASIC-0,51□□□□□ -2,49
Scn4aQ9ER60 Gm25887-201ENSMUST00000157777 84 ntBASIC-0,51□□□□□ -2,49
Scn4aQ9ER60 Gm25367-201ENSMUST00000158846 106 ntBASIC-0,51□□□□□ -2,49
Scn4aQ9ER60 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC-0,51□□□□□ -2,49
Scn4aQ9ER60 Gm22772-201ENSMUST00000104451 121 ntBASIC-0,52□□□□□ -2,49
Scn4aQ9ER60 Gm24717-201ENSMUST00000157522 124 ntBASIC-0,52□□□□□ -2,49
Scn4aQ9ER60 Gm22966-201ENSMUST00000157957 129 ntBASIC-0,52□□□□□ -2,49
Scn4aQ9ER60 Gm43749-201ENSMUST00000199345 352 ntBASIC-0,52□□□□□ -2,49
Scn4aQ9ER60 Gm23344-201ENSMUST00000083818 68 ntBASIC-0,52□□□□□ -2,49
Scn4aQ9ER60 Gm24263-201ENSMUST00000104059 107 ntBASIC-0,52□□□□□ -2,49
Scn4aQ9ER60 Gm26395-201ENSMUST00000104094 132 ntBASIC-0,52□□□□□ -2,49
Scn4aQ9ER60 AC126939.1-201ENSMUST00000224943 226 ntBASIC-0,52□□□□□ -2,49
Scn4aQ9ER60 Mir509-201ENSMUST00000196089 75 ntBASIC-0,54□□□□□ -2,5
Scn4aQ9ER60 Gm25055-201ENSMUST00000157369 76 ntBASIC-0,54□□□□□ -2,5
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms