Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm23301-201ENSMUST00000082713 65 ntBASIC1.38□□□□□ -2.19
Upf1Q9EPU0 Gm22544-201ENSMUST00000104349 127 ntBASIC1.37□□□□□ -2.19
Upf1Q9EPU0 Gm16265-201ENSMUST00000134558 108 ntBASIC1.37□□□□□ -2.19
Upf1Q9EPU0 Gm26089-201ENSMUST00000157898 107 ntBASIC1.37□□□□□ -2.19
Upf1Q9EPU0 Gm26466-201ENSMUST00000179615 79 ntBASIC1.37□□□□□ -2.19
Upf1Q9EPU0 Gm27297-201ENSMUST00000183395 105 ntBASIC1.37□□□□□ -2.19
Upf1Q9EPU0 Gm44602-201ENSMUST00000205948 132 ntBASIC1.37□□□□□ -2.19
Upf1Q9EPU0 Gm25600-201ENSMUST00000158357 106 ntBASIC1.36□□□□□ -2.19
Upf1Q9EPU0 Gm24549-201ENSMUST00000158647 139 ntBASIC1.36□□□□□ -2.19
Upf1Q9EPU0 Mir5619-201ENSMUST00000176065 61 ntBASIC1.36□□□□□ -2.19
Upf1Q9EPU0 Gm24920-201ENSMUST00000083018 85 ntBASIC1.36□□□□□ -2.19
Upf1Q9EPU0 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
Upf1Q9EPU0 Gm23482-201ENSMUST00000104172 122 ntBASIC1.35□□□□□ -2.19
Upf1Q9EPU0 Gm6272-201ENSMUST00000121256 171 ntBASIC1.35□□□□□ -2.19
Upf1Q9EPU0 Gm24650-201ENSMUST00000157105 103 ntBASIC1.35□□□□□ -2.19
Upf1Q9EPU0 Gm24399-201ENSMUST00000157869 74 ntBASIC1.35□□□□□ -2.19
Upf1Q9EPU0 Mir3079-201ENSMUST00000175428 90 ntBASIC1.35□□□□□ -2.19
Upf1Q9EPU0 Gm27711-201ENSMUST00000183802 118 ntBASIC1.35□□□□□ -2.19
Upf1Q9EPU0 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.35□□□□□ -2.19
Upf1Q9EPU0 AC132833.2-201ENSMUST00000228699 157 ntBASIC1.35□□□□□ -2.19
Upf1Q9EPU0 Gm22030-201ENSMUST00000116942 63 ntBASIC1.34□□□□□ -2.19
Upf1Q9EPU0 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.34□□□□□ -2.19
Upf1Q9EPU0 Gm22212-201ENSMUST00000158096 106 ntBASIC1.34□□□□□ -2.19
Upf1Q9EPU0 Gm25974-201ENSMUST00000158701 94 ntBASIC1.34□□□□□ -2.19
Upf1Q9EPU0 Gm22559-201ENSMUST00000157329 134 ntBASIC1.33□□□□□ -2.2
Upf1Q9EPU0 Gm22541-201ENSMUST00000158165 127 ntBASIC1.33□□□□□ -2.2
Upf1Q9EPU0 Gm23853-201ENSMUST00000158375 104 ntBASIC1.33□□□□□ -2.2
Upf1Q9EPU0 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.32□□□□□ -2.2
Upf1Q9EPU0 Gm24895-201ENSMUST00000122742 74 ntBASIC1.32□□□□□ -2.2
Upf1Q9EPU0 Gm44483-201ENSMUST00000197203 97 ntBASIC1.32□□□□□ -2.2
Upf1Q9EPU0 Mir101a-201ENSMUST00000083517 83 ntBASIC1.32□□□□□ -2.2
Upf1Q9EPU0 Mir33-201ENSMUST00000083531 69 ntBASIC1.32□□□□□ -2.2
Upf1Q9EPU0 Mir15a-201ENSMUST00000175266 84 ntBASIC1.31□□□□□ -2.2
Upf1Q9EPU0 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Upf1Q9EPU0 Gm23661-201ENSMUST00000122630 87 ntBASIC1.3□□□□□ -2.2
Upf1Q9EPU0 Gm24009-201ENSMUST00000157734 93 ntBASIC1.3□□□□□ -2.2
Upf1Q9EPU0 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.3□□□□□ -2.2
Upf1Q9EPU0 CT030166.3-201ENSMUST00000223203 193 ntBASIC1.3□□□□□ -2.2
Upf1Q9EPU0 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.29□□□□□ -2.2
Upf1Q9EPU0 Gm24290-201ENSMUST00000157634 96 ntBASIC1.29□□□□□ -2.2
Upf1Q9EPU0 Gm25693-201ENSMUST00000175443 85 ntBASIC1.29□□□□□ -2.2
Upf1Q9EPU0 Gm45197-201ENSMUST00000205288 151 ntBASIC1.29□□□□□ -2.2
Upf1Q9EPU0 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.29□□□□□ -2.2
Upf1Q9EPU0 Gm22429-201ENSMUST00000158553 130 ntBASIC1.28□□□□□ -2.2
Upf1Q9EPU0 Gm24208-201ENSMUST00000082783 135 ntBASIC1.28□□□□□ -2.2
Upf1Q9EPU0 Gm22251-201ENSMUST00000083216 107 ntBASIC1.28□□□□□ -2.2
Upf1Q9EPU0 Mir377-201ENSMUST00000083504 68 ntBASIC1.28□□□□□ -2.2
Upf1Q9EPU0 Gm26253-201ENSMUST00000122493 103 ntBASIC1.27□□□□□ -2.21
Upf1Q9EPU0 Gm25289-201ENSMUST00000122799 119 ntBASIC1.27□□□□□ -2.21
Upf1Q9EPU0 Gm22074-201ENSMUST00000158595 113 ntBASIC1.27□□□□□ -2.21
Upf1Q9EPU0 Gm20386-201ENSMUST00000174010 132 ntBASIC1.27□□□□□ -2.21
Upf1Q9EPU0 Gm23790-201ENSMUST00000083013 107 ntBASIC1.27□□□□□ -2.21
Upf1Q9EPU0 Gm22672-201ENSMUST00000104414 134 ntBASIC1.26□□□□□ -2.21
Upf1Q9EPU0 Gm23989-201ENSMUST00000117030 66 ntBASIC1.26□□□□□ -2.21
Upf1Q9EPU0 Gm24381-201ENSMUST00000122697 104 ntBASIC1.25□□□□□ -2.21
Upf1Q9EPU0 Gm24648-201ENSMUST00000157111 132 ntBASIC1.25□□□□□ -2.21
Upf1Q9EPU0 Gm22770-201ENSMUST00000158368 67 ntBASIC1.25□□□□□ -2.21
Upf1Q9EPU0 Mir141-201ENSMUST00000083540 72 ntBASIC1.25□□□□□ -2.21
Upf1Q9EPU0 Gm25022-201ENSMUST00000102205 83 ntBASIC1.24□□□□□ -2.21
Upf1Q9EPU0 Gm23369-201ENSMUST00000175406 105 ntBASIC1.24□□□□□ -2.21
Upf1Q9EPU0 Mir467a-6-201ENSMUST00000177790 83 ntBASIC1.24□□□□□ -2.21
Upf1Q9EPU0 Mir467a-3-201ENSMUST00000178082 83 ntBASIC1.24□□□□□ -2.21
Upf1Q9EPU0 Mir467a-7-201ENSMUST00000178635 83 ntBASIC1.24□□□□□ -2.21
Upf1Q9EPU0 Mir467a-10-201ENSMUST00000179320 83 ntBASIC1.24□□□□□ -2.21
Upf1Q9EPU0 Mir467a-5-201ENSMUST00000179352 83 ntBASIC1.24□□□□□ -2.21
Upf1Q9EPU0 Mir467a-2-201ENSMUST00000179447 83 ntBASIC1.24□□□□□ -2.21
Upf1Q9EPU0 Mir467a-9-201ENSMUST00000179752 83 ntBASIC1.24□□□□□ -2.21
Upf1Q9EPU0 Mir467a-4-201ENSMUST00000179923 83 ntBASIC1.24□□□□□ -2.21
Upf1Q9EPU0 Mir467a-8-201ENSMUST00000180070 83 ntBASIC1.24□□□□□ -2.21
Upf1Q9EPU0 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.23□□□□□ -2.21
Upf1Q9EPU0 Gm23994-201ENSMUST00000158059 88 ntBASIC1.23□□□□□ -2.21
Upf1Q9EPU0 Gm23020-201ENSMUST00000158766 253 ntBASIC1.23□□□□□ -2.21
Upf1Q9EPU0 Mir100-201ENSMUST00000175270 80 ntBASIC1.23□□□□□ -2.21
Upf1Q9EPU0 Mir6904-201ENSMUST00000183443 67 ntBASIC1.23□□□□□ -2.21
Upf1Q9EPU0 Gm25635-201ENSMUST00000082675 131 ntBASIC1.23□□□□□ -2.21
Upf1Q9EPU0 Gm22786-201ENSMUST00000104086 122 ntBASIC1.22□□□□□ -2.21
Upf1Q9EPU0 Mir6381-201ENSMUST00000183426 87 ntBASIC1.22□□□□□ -2.21
Upf1Q9EPU0 Mir216b-201ENSMUST00000102363 86 ntBASIC1.21□□□□□ -2.22
Upf1Q9EPU0 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Upf1Q9EPU0 Gm24686-201ENSMUST00000157755 93 ntBASIC1.21□□□□□ -2.22
Upf1Q9EPU0 Gm23349-201ENSMUST00000158432 98 ntBASIC1.21□□□□□ -2.22
Upf1Q9EPU0 Mir6237-201ENSMUST00000183808 91 ntBASIC1.21□□□□□ -2.22
Upf1Q9EPU0 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.21□□□□□ -2.22
Upf1Q9EPU0 Gm22788-201ENSMUST00000157876 61 ntBASIC1.2□□□□□ -2.22
Upf1Q9EPU0 Gm23261-201ENSMUST00000158316 136 ntBASIC1.2□□□□□ -2.22
Upf1Q9EPU0 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.2□□□□□ -2.22
Upf1Q9EPU0 Mir7010-201ENSMUST00000183464 63 ntBASIC1.2□□□□□ -2.22
Upf1Q9EPU0 Mir376b-201ENSMUST00000195930 82 ntBASIC1.2□□□□□ -2.22
Upf1Q9EPU0 Gm22048-201ENSMUST00000104721 89 ntBASIC1.19□□□□□ -2.22
Upf1Q9EPU0 Gm23278-201ENSMUST00000157911 143 ntBASIC1.19□□□□□ -2.22
Upf1Q9EPU0 Gm24323-201ENSMUST00000175342 77 ntBASIC1.19□□□□□ -2.22
Upf1Q9EPU0 Gm44211-201ENSMUST00000204867 145 ntBASIC1.19□□□□□ -2.22
Upf1Q9EPU0 Gm25040-201ENSMUST00000103877 66 ntBASIC1.18□□□□□ -2.22
Upf1Q9EPU0 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.18□□□□□ -2.22
Upf1Q9EPU0 Gm22980-201ENSMUST00000082608 70 ntBASIC1.18□□□□□ -2.22
Upf1Q9EPU0 Mir22-201ENSMUST00000083595 95 ntBASIC1.18□□□□□ -2.22
Upf1Q9EPU0 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.17□□□□□ -2.22
Upf1Q9EPU0 Gm23416-201ENSMUST00000175520 95 ntBASIC1.17□□□□□ -2.22
Upf1Q9EPU0 Gm25449-201ENSMUST00000179389 79 ntBASIC1.17□□□□□ -2.22
Upf1Q9EPU0 Gm27977-201ENSMUST00000185159 111 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 152 ms