Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm25068-201ENSMUST00000103895 110 ntBASIC1,78□□□□□ -2,12
Trim42Q9D2H5 Gm25110-201ENSMUST00000116684 121 ntBASIC1,78□□□□□ -2,12
Trim42Q9D2H5 Gm25775-201ENSMUST00000116716 121 ntBASIC1,78□□□□□ -2,12
Trim42Q9D2H5 Gm24795-201ENSMUST00000116737 121 ntBASIC1,78□□□□□ -2,12
Trim42Q9D2H5 Gm25171-201ENSMUST00000116926 121 ntBASIC1,78□□□□□ -2,12
Trim42Q9D2H5 Gm24478-201ENSMUST00000157439 158 ntBASIC1,78□□□□□ -2,12
Trim42Q9D2H5 Gm25693-201ENSMUST00000175443 85 ntBASIC1,78□□□□□ -2,12
Trim42Q9D2H5 Gm22862-201ENSMUST00000178593 121 ntBASIC1,78□□□□□ -2,12
Trim42Q9D2H5 Gm27959-201ENSMUST00000185172 111 ntBASIC1,78□□□□□ -2,12
Trim42Q9D2H5 AC116319.1-201ENSMUST00000227765 222 ntBASIC1,78□□□□□ -2,12
Trim42Q9D2H5 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1,78□□□□□ -2,13
Trim42Q9D2H5 Gm23500-201ENSMUST00000157735 98 ntBASIC1,77□□□□□ -2,13
Trim42Q9D2H5 Gm22100-201ENSMUST00000157926 63 ntBASIC1,77□□□□□ -2,13
Trim42Q9D2H5 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1,76□□□□□ -2,13
Trim42Q9D2H5 Gm24580-201ENSMUST00000103965 131 ntBASIC1,75□□□□□ -2,13
Trim42Q9D2H5 Gm25465-201ENSMUST00000157716 105 ntBASIC1,75□□□□□ -2,13
Trim42Q9D2H5 Gm22664-201ENSMUST00000158719 105 ntBASIC1,75□□□□□ -2,13
Trim42Q9D2H5 Gm27554-201ENSMUST00000185074 98 ntBASIC1,75□□□□□ -2,13
Trim42Q9D2H5 Mir7118-201ENSMUST00000197760 61 ntBASIC1,75□□□□□ -2,13
Trim42Q9D2H5 Gm25524-201ENSMUST00000101821 107 ntBASIC1,74□□□□□ -2,13
Trim42Q9D2H5 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1,74□□□□□ -2,13
Trim42Q9D2H5 Gm25759-201ENSMUST00000103988 129 ntBASIC1,74□□□□□ -2,13
Trim42Q9D2H5 Gm25648-201ENSMUST00000177844 79 ntBASIC1,74□□□□□ -2,13
Trim42Q9D2H5 Mir6901-201ENSMUST00000185062 62 ntBASIC1,74□□□□□ -2,13
Trim42Q9D2H5 Gm45655-201ENSMUST00000211625 160 ntBASIC1,74□□□□□ -2,13
Trim42Q9D2H5 Mir322-201ENSMUST00000083484 95 ntBASIC1,74□□□□□ -2,13
Trim42Q9D2H5 Mir709-201ENSMUST00000102190 88 ntBASIC1,73□□□□□ -2,13
Trim42Q9D2H5 Mir487b-201ENSMUST00000102265 82 ntBASIC1,73□□□□□ -2,13
Trim42Q9D2H5 Gm25663-201ENSMUST00000157698 135 ntBASIC1,73□□□□□ -2,13
Trim42Q9D2H5 Gm23630-201ENSMUST00000175292 104 ntBASIC1,73□□□□□ -2,13
Trim42Q9D2H5 Gm18433-201ENSMUST00000192747 197 ntBASIC1,73□□□□□ -2,13
Trim42Q9D2H5 Gm13231-201ENSMUST00000119218 2850 ntBASIC1,73□□□□□ -2,13
Trim42Q9D2H5 Gm22786-201ENSMUST00000104086 122 ntBASIC1,72□□□□□ -2,13
Trim42Q9D2H5 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1,72□□□□□ -2,13
Trim42Q9D2H5 Gm23991-201ENSMUST00000117033 93 ntBASIC1,72□□□□□ -2,13
Trim42Q9D2H5 Gm22264-201ENSMUST00000178200 107 ntBASIC1,72□□□□□ -2,13
Trim42Q9D2H5 Gm27265-201ENSMUST00000183559 77 ntBASIC1,72□□□□□ -2,13
Trim42Q9D2H5 Mir7678-201ENSMUST00000185076 71 ntBASIC1,72□□□□□ -2,13
Trim42Q9D2H5 Gm45654-201ENSMUST00000210980 123 ntBASIC1,72□□□□□ -2,13
Trim42Q9D2H5 Gm24262-201ENSMUST00000157431 144 ntBASIC1,71□□□□□ -2,14
Trim42Q9D2H5 Snord2-201ENSMUST00000157899 69 ntBASIC1,71□□□□□ -2,14
Trim42Q9D2H5 Mir1961-201ENSMUST00000158643 112 ntBASIC1,71□□□□□ -2,14
Trim42Q9D2H5 Gm25328-201ENSMUST00000175013 107 ntBASIC1,71□□□□□ -2,14
Trim42Q9D2H5 Mir3108-201ENSMUST00000175500 79 ntBASIC1,71□□□□□ -2,14
Trim42Q9D2H5 Mir6351-201ENSMUST00000183826 99 ntBASIC1,71□□□□□ -2,14
Trim42Q9D2H5 Gm27977-201ENSMUST00000185159 111 ntBASIC1,71□□□□□ -2,14
Trim42Q9D2H5 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1,71□□□□□ -2,14
Trim42Q9D2H5 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1,71□□□□□ -2,14
Trim42Q9D2H5 Gm25416-201ENSMUST00000104221 107 ntBASIC1,7□□□□□ -2,14
Trim42Q9D2H5 Gm24494-201ENSMUST00000083804 81 ntBASIC1,7□□□□□ -2,14
Trim42Q9D2H5 Mir653-201ENSMUST00000102402 85 ntBASIC1,69□□□□□ -2,14
Trim42Q9D2H5 Gm22803-201ENSMUST00000158049 283 ntBASIC1,69□□□□□ -2,14
Trim42Q9D2H5 Gm24073-201ENSMUST00000158177 106 ntBASIC1,69□□□□□ -2,14
Trim42Q9D2H5 Gm25936-201ENSMUST00000179952 114 ntBASIC1,69□□□□□ -2,14
Trim42Q9D2H5 Mir6997-201ENSMUST00000184313 71 ntBASIC1,69□□□□□ -2,14
Trim42Q9D2H5 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1,69□□□□□ -2,14
Trim42Q9D2H5 Gm22750-201ENSMUST00000102076 103 ntBASIC1,68□□□□□ -2,14
Trim42Q9D2H5 Gm25541-201ENSMUST00000116888 126 ntBASIC1,68□□□□□ -2,14
Trim42Q9D2H5 Gm23336-201ENSMUST00000117023 123 ntBASIC1,68□□□□□ -2,14
Trim42Q9D2H5 Gm22099-201ENSMUST00000157925 123 ntBASIC1,68□□□□□ -2,14
Trim42Q9D2H5 Gm22541-201ENSMUST00000158165 127 ntBASIC1,68□□□□□ -2,14
Trim42Q9D2H5 Gm22164-201ENSMUST00000158413 106 ntBASIC1,68□□□□□ -2,14
Trim42Q9D2H5 Gm25641-201ENSMUST00000175135 108 ntBASIC1,68□□□□□ -2,14
Trim42Q9D2H5 Gm29432-201ENSMUST00000185397 139 ntBASIC1,68□□□□□ -2,14
Trim42Q9D2H5 Gm23730-201ENSMUST00000083236 107 ntBASIC1,68□□□□□ -2,14
Trim42Q9D2H5 Gm22785-201ENSMUST00000104087 132 ntBASIC1,67□□□□□ -2,14
Trim42Q9D2H5 Gm22087-201ENSMUST00000158339 88 ntBASIC1,67□□□□□ -2,14
Trim42Q9D2H5 Gm23114-201ENSMUST00000158478 117 ntBASIC1,67□□□□□ -2,14
Trim42Q9D2H5 Mir7226-201ENSMUST00000184953 60 ntBASIC1,67□□□□□ -2,14
Trim42Q9D2H5 Gm25820-202ENSMUST00000197479 128 ntBASIC1,67□□□□□ -2,14
Trim42Q9D2H5 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1,67□□□□□ -2,14
Trim42Q9D2H5 n-R5s159-201ENSMUST00000122681 120 ntBASIC1,66□□□□□ -2,14
Trim42Q9D2H5 Mir1933-201ENSMUST00000158930 88 ntBASIC1,66□□□□□ -2,14
Trim42Q9D2H5 Gm27937-201ENSMUST00000183605 88 ntBASIC1,66□□□□□ -2,14
Trim42Q9D2H5 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1,66□□□□□ -2,14
Trim42Q9D2H5 Gm23301-201ENSMUST00000082713 65 ntBASIC1,66□□□□□ -2,14
Trim42Q9D2H5 Mir92-2-201ENSMUST00000083679 91 ntBASIC1,66□□□□□ -2,14
Trim42Q9D2H5 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1,65□□□□□ -2,14
Trim42Q9D2H5 Gm23339-201ENSMUST00000158962 139 ntBASIC1,65□□□□□ -2,15
Trim42Q9D2H5 Gm22401-201ENSMUST00000174927 117 ntBASIC1,65□□□□□ -2,15
Trim42Q9D2H5 Gm27248-201ENSMUST00000184004 166 ntBASIC1,65□□□□□ -2,15
Trim42Q9D2H5 AL772271.1-201ENSMUST00000196848 65 ntBASIC1,65□□□□□ -2,15
Trim42Q9D2H5 Gm43944-201ENSMUST00000205220 120 ntBASIC1,65□□□□□ -2,15
Trim42Q9D2H5 CT030170.1-201ENSMUST00000222183 148 ntBASIC1,65□□□□□ -2,15
Trim42Q9D2H5 Gm24624-201ENSMUST00000082617 164 ntBASIC1,65□□□□□ -2,15
Trim42Q9D2H5 Gm24612-201ENSMUST00000083267 107 ntBASIC1,65□□□□□ -2,15
Trim42Q9D2H5 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1,65□□□□□ -2,15
Trim42Q9D2H5 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1,64□□□□□ -2,15
Trim42Q9D2H5 Snord13-201ENSMUST00000157627 104 ntBASIC1,64□□□□□ -2,15
Trim42Q9D2H5 Gm44962-201ENSMUST00000206460 279 ntBASIC1,64□□□□□ -2,15
Trim42Q9D2H5 Snord96a-201ENSMUST00000082791 81 ntBASIC1,64□□□□□ -2,15
Trim42Q9D2H5 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1,64□□□□□ -2,15
Trim42Q9D2H5 Gm28383-201ENSMUST00000187563 139 ntBASIC1,63□□□□□ -2,15
Trim42Q9D2H5 Gm25040-201ENSMUST00000103877 66 ntBASIC1,62□□□□□ -2,15
Trim42Q9D2H5 AC238676.2-201ENSMUST00000220910 94 ntBASIC1,62□□□□□ -2,15
Trim42Q9D2H5 Mir3098-201ENSMUST00000175416 87 ntBASIC1,61□□□□□ -2,15
Trim42Q9D2H5 Mir9-3-201ENSMUST00000175497 90 ntBASIC1,61□□□□□ -2,15
Trim42Q9D2H5 Mir7673-201ENSMUST00000184567 64 ntBASIC1,61□□□□□ -2,15
Trim42Q9D2H5 Gm44396-201ENSMUST00000199843 114 ntBASIC1,61□□□□□ -2,15
Trim42Q9D2H5 CT025630.1-201ENSMUST00000227901 172 ntBASIC1,61□□□□□ -2,15
Retrieved 100 of 76,532 protein–RNA pairs in 95,9 ms