Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm23410-201ENSMUST00000179967 107 ntBASIC0.51□□□□□ -2.33
Ccdc28bQ8CEG5 Gm27289-201ENSMUST00000183341 82 ntBASIC0.51□□□□□ -2.33
Ccdc28bQ8CEG5 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.51□□□□□ -2.33
Ccdc28bQ8CEG5 Gm22505-201ENSMUST00000082956 108 ntBASIC0.51□□□□□ -2.33
Ccdc28bQ8CEG5 Gm22363-201ENSMUST00000083100 108 ntBASIC0.51□□□□□ -2.33
Ccdc28bQ8CEG5 Gm23814-201ENSMUST00000083230 102 ntBASIC0.51□□□□□ -2.33
Ccdc28bQ8CEG5 Gm23095-201ENSMUST00000083446 107 ntBASIC0.51□□□□□ -2.33
Ccdc28bQ8CEG5 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Ccdc28bQ8CEG5 Gm23991-201ENSMUST00000117033 93 ntBASIC0.5□□□□□ -2.33
Ccdc28bQ8CEG5 Gm24379-201ENSMUST00000122695 86 ntBASIC0.5□□□□□ -2.33
Ccdc28bQ8CEG5 Mir6389-201ENSMUST00000183661 102 ntBASIC0.5□□□□□ -2.33
Ccdc28bQ8CEG5 Gm3702-201ENSMUST00000211754 346 ntBASIC0.5□□□□□ -2.33
Ccdc28bQ8CEG5 Mir200a-201ENSMUST00000083466 90 ntBASIC0.5□□□□□ -2.33
Ccdc28bQ8CEG5 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
Ccdc28bQ8CEG5 Gm25170-201ENSMUST00000104191 129 ntBASIC0.49□□□□□ -2.33
Ccdc28bQ8CEG5 Gm22788-201ENSMUST00000157876 61 ntBASIC0.49□□□□□ -2.33
Ccdc28bQ8CEG5 Gm22212-201ENSMUST00000158096 106 ntBASIC0.49□□□□□ -2.33
Ccdc28bQ8CEG5 Gm22565-201ENSMUST00000175540 69 ntBASIC0.49□□□□□ -2.33
Ccdc28bQ8CEG5 Gm27943-201ENSMUST00000184844 116 ntBASIC0.49□□□□□ -2.33
Ccdc28bQ8CEG5 Gm43927-201ENSMUST00000204599 117 ntBASIC0.49□□□□□ -2.33
Ccdc28bQ8CEG5 Gm45197-201ENSMUST00000205288 151 ntBASIC0.49□□□□□ -2.33
Ccdc28bQ8CEG5 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.49□□□□□ -2.33
Ccdc28bQ8CEG5 Snora75-201ENSMUST00000082903 133 ntBASIC0.49□□□□□ -2.33
Ccdc28bQ8CEG5 Gm22652-201ENSMUST00000083207 131 ntBASIC0.49□□□□□ -2.33
Ccdc28bQ8CEG5 Gm25416-201ENSMUST00000104221 107 ntBASIC0.48□□□□□ -2.33
Ccdc28bQ8CEG5 Gm24233-201ENSMUST00000104317 122 ntBASIC0.48□□□□□ -2.33
Ccdc28bQ8CEG5 Gm27717-201ENSMUST00000183933 151 ntBASIC0.48□□□□□ -2.33
Ccdc28bQ8CEG5 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.48□□□□□ -2.33
Ccdc28bQ8CEG5 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
Ccdc28bQ8CEG5 Gm22469-201ENSMUST00000104118 133 ntBASIC0.47□□□□□ -2.33
Ccdc28bQ8CEG5 Gm22706-201ENSMUST00000157907 112 ntBASIC0.47□□□□□ -2.33
Ccdc28bQ8CEG5 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.46□□□□□ -2.34
Ccdc28bQ8CEG5 Gm24648-201ENSMUST00000157111 132 ntBASIC0.46□□□□□ -2.34
Ccdc28bQ8CEG5 AC140930.2-201ENSMUST00000221803 109 ntBASIC0.46□□□□□ -2.34
Ccdc28bQ8CEG5 Gm22004-201ENSMUST00000101884 107 ntBASIC0.45□□□□□ -2.34
Ccdc28bQ8CEG5 Gm24234-201ENSMUST00000104316 107 ntBASIC0.45□□□□□ -2.34
Ccdc28bQ8CEG5 Gm23708-201ENSMUST00000104367 123 ntBASIC0.45□□□□□ -2.34
Ccdc28bQ8CEG5 Gm25056-201ENSMUST00000157372 62 ntBASIC0.45□□□□□ -2.34
Ccdc28bQ8CEG5 Gm24963-201ENSMUST00000157916 144 ntBASIC0.45□□□□□ -2.34
Ccdc28bQ8CEG5 Mir8116-201ENSMUST00000184134 97 ntBASIC0.45□□□□□ -2.34
Ccdc28bQ8CEG5 Gm38295-201ENSMUST00000191951 151 ntBASIC0.45□□□□□ -2.34
Ccdc28bQ8CEG5 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.45□□□□□ -2.34
Ccdc28bQ8CEG5 Gm25337-201ENSMUST00000083723 104 ntBASIC0.45□□□□□ -2.34
Ccdc28bQ8CEG5 Gm24686-201ENSMUST00000157755 93 ntBASIC0.44□□□□□ -2.34
Ccdc28bQ8CEG5 Gm22522-201ENSMUST00000158271 151 ntBASIC0.44□□□□□ -2.34
Ccdc28bQ8CEG5 Gm24321-201ENSMUST00000175348 80 ntBASIC0.44□□□□□ -2.34
Ccdc28bQ8CEG5 Gm43432-201ENSMUST00000196352 121 ntBASIC0.44□□□□□ -2.34
Ccdc28bQ8CEG5 Gm25635-201ENSMUST00000082675 131 ntBASIC0.44□□□□□ -2.34
Ccdc28bQ8CEG5 Gm24920-201ENSMUST00000083018 85 ntBASIC0.44□□□□□ -2.34
Ccdc28bQ8CEG5 Gm25894-201ENSMUST00000083458 75 ntBASIC0.44□□□□□ -2.34
Ccdc28bQ8CEG5 Gm25274-201ENSMUST00000104296 135 ntBASIC0.43□□□□□ -2.34
Ccdc28bQ8CEG5 Mir6394-201ENSMUST00000184738 99 ntBASIC0.43□□□□□ -2.34
Ccdc28bQ8CEG5 mt-Tv-201ENSMUST00000082389 69 ntBASIC0.43□□□□□ -2.34
Ccdc28bQ8CEG5 Gm24410-201ENSMUST00000083433 107 ntBASIC0.43□□□□□ -2.34
Ccdc28bQ8CEG5 Gm26109-201ENSMUST00000083970 70 ntBASIC0.43□□□□□ -2.34
Ccdc28bQ8CEG5 Gm25393-201ENSMUST00000157336 285 ntBASIC0.42□□□□□ -2.34
Ccdc28bQ8CEG5 Gm26484-201ENSMUST00000158018 106 ntBASIC0.42□□□□□ -2.34
Ccdc28bQ8CEG5 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Ccdc28bQ8CEG5 Gm42506-201ENSMUST00000202009 150 ntBASIC0.42□□□□□ -2.34
Ccdc28bQ8CEG5 Gm25815-201ENSMUST00000082755 107 ntBASIC0.42□□□□□ -2.34
Ccdc28bQ8CEG5 Gm26456-201ENSMUST00000082831 111 ntBASIC0.42□□□□□ -2.34
Ccdc28bQ8CEG5 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.42□□□□□ -2.34
Ccdc28bQ8CEG5 Gm23644-201ENSMUST00000157856 77 ntBASIC0.41□□□□□ -2.34
Ccdc28bQ8CEG5 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.41□□□□□ -2.34
Ccdc28bQ8CEG5 Gm23291-201ENSMUST00000175611 78 ntBASIC0.41□□□□□ -2.34
Ccdc28bQ8CEG5 Mir6985-201ENSMUST00000184641 61 ntBASIC0.41□□□□□ -2.34
Ccdc28bQ8CEG5 Gm43907-201ENSMUST00000203128 117 ntBASIC0.41□□□□□ -2.34
Ccdc28bQ8CEG5 mt-Tn-201ENSMUST00000082399 71 ntBASIC0.41□□□□□ -2.34
Ccdc28bQ8CEG5 Mir344-201ENSMUST00000083634 95 ntBASIC0.41□□□□□ -2.34
Ccdc28bQ8CEG5 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.41□□□□□ -2.34
Ccdc28bQ8CEG5 Gm24278-201ENSMUST00000104239 127 ntBASIC0.4□□□□□ -2.35
Ccdc28bQ8CEG5 Gm24877-201ENSMUST00000158779 116 ntBASIC0.4□□□□□ -2.35
Ccdc28bQ8CEG5 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.4□□□□□ -2.35
Ccdc28bQ8CEG5 Gm24801-201ENSMUST00000178503 105 ntBASIC0.4□□□□□ -2.35
Ccdc28bQ8CEG5 Gm44455-201ENSMUST00000200061 82 ntBASIC0.4□□□□□ -2.35
Ccdc28bQ8CEG5 AC166341.8-201ENSMUST00000221267 108 ntBASIC0.4□□□□□ -2.35
Ccdc28bQ8CEG5 Gm25987-201ENSMUST00000083234 107 ntBASIC0.4□□□□□ -2.35
Ccdc28bQ8CEG5 Mir670-201ENSMUST00000102380 100 ntBASIC0.39□□□□□ -2.35
Ccdc28bQ8CEG5 Gm24482-201ENSMUST00000117005 93 ntBASIC0.39□□□□□ -2.35
Ccdc28bQ8CEG5 Gm24323-201ENSMUST00000175342 77 ntBASIC0.39□□□□□ -2.35
Ccdc28bQ8CEG5 Mir7229-201ENSMUST00000197062 53 ntBASIC0.39□□□□□ -2.35
Ccdc28bQ8CEG5 Gm25380-201ENSMUST00000175463 107 ntBASIC0.38□□□□□ -2.35
Ccdc28bQ8CEG5 Gm24641-201ENSMUST00000178055 107 ntBASIC0.38□□□□□ -2.35
Ccdc28bQ8CEG5 Gm25484-201ENSMUST00000178217 107 ntBASIC0.38□□□□□ -2.35
Ccdc28bQ8CEG5 Gm26138-201ENSMUST00000179236 107 ntBASIC0.38□□□□□ -2.35
Ccdc28bQ8CEG5 Gm22821-201ENSMUST00000179288 107 ntBASIC0.38□□□□□ -2.35
Ccdc28bQ8CEG5 Mir509-201ENSMUST00000196089 75 ntBASIC0.38□□□□□ -2.35
Ccdc28bQ8CEG5 Gm44458-201ENSMUST00000196594 143 ntBASIC0.38□□□□□ -2.35
Ccdc28bQ8CEG5 AC157602.1-201ENSMUST00000197446 105 ntBASIC0.38□□□□□ -2.35
Ccdc28bQ8CEG5 Gm23140-201ENSMUST00000082487 107 ntBASIC0.38□□□□□ -2.35
Ccdc28bQ8CEG5 Gm23298-201ENSMUST00000083181 107 ntBASIC0.38□□□□□ -2.35
Ccdc28bQ8CEG5 Gm24614-201ENSMUST00000083269 107 ntBASIC0.38□□□□□ -2.35
Ccdc28bQ8CEG5 Gm22057-201ENSMUST00000083387 107 ntBASIC0.38□□□□□ -2.35
Ccdc28bQ8CEG5 Gm25516-201ENSMUST00000083857 107 ntBASIC0.38□□□□□ -2.35
Ccdc28bQ8CEG5 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.37□□□□□ -2.35
Ccdc28bQ8CEG5 Gm24073-201ENSMUST00000158177 106 ntBASIC0.37□□□□□ -2.35
Ccdc28bQ8CEG5 AC132833.2-201ENSMUST00000228699 157 ntBASIC0.37□□□□□ -2.35
Ccdc28bQ8CEG5 Gm22303-201ENSMUST00000082686 122 ntBASIC0.37□□□□□ -2.35
Ccdc28bQ8CEG5 Mir10b-201ENSMUST00000083566 68 ntBASIC0.37□□□□□ -2.35
Ccdc28bQ8CEG5 Gm26081-201ENSMUST00000104068 132 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 131.8 ms