Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm25740-201ENSMUST00000180247 107 ntBASIC1.21□□□□□ -2.22
Trerf1Q8BXJ2 Gm27656-201ENSMUST00000185055 80 ntBASIC1.21□□□□□ -2.22
Trerf1Q8BXJ2 Gm24624-201ENSMUST00000082617 164 ntBASIC1.21□□□□□ -2.22
Trerf1Q8BXJ2 Gm25644-201ENSMUST00000083209 107 ntBASIC1.21□□□□□ -2.22
Trerf1Q8BXJ2 Mir5117-201ENSMUST00000083226 84 ntBASIC1.21□□□□□ -2.22
Trerf1Q8BXJ2 Mir324-201ENSMUST00000083600 89 ntBASIC1.21□□□□□ -2.22
Trerf1Q8BXJ2 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Trerf1Q8BXJ2 Gm24342-201ENSMUST00000103907 104 ntBASIC1.2□□□□□ -2.22
Trerf1Q8BXJ2 Gm23130-201ENSMUST00000104252 74 ntBASIC1.2□□□□□ -2.22
Trerf1Q8BXJ2 Snord71-201ENSMUST00000104361 85 ntBASIC1.2□□□□□ -2.22
Trerf1Q8BXJ2 Gm25542-201ENSMUST00000116889 94 ntBASIC1.2□□□□□ -2.22
Trerf1Q8BXJ2 Gm23328-201ENSMUST00000157418 132 ntBASIC1.2□□□□□ -2.22
Trerf1Q8BXJ2 Gm24064-201ENSMUST00000157486 106 ntBASIC1.2□□□□□ -2.22
Trerf1Q8BXJ2 Gm24686-201ENSMUST00000157755 93 ntBASIC1.2□□□□□ -2.22
Trerf1Q8BXJ2 Gm22522-201ENSMUST00000158271 151 ntBASIC1.2□□□□□ -2.22
Trerf1Q8BXJ2 Mir1950-201ENSMUST00000158526 74 ntBASIC1.2□□□□□ -2.22
Trerf1Q8BXJ2 Gm23636-201ENSMUST00000175070 95 ntBASIC1.2□□□□□ -2.22
Trerf1Q8BXJ2 Snora26-201ENSMUST00000175614 121 ntBASIC1.2□□□□□ -2.22
Trerf1Q8BXJ2 Gm25128-201ENSMUST00000083339 76 ntBASIC1.2□□□□□ -2.22
Trerf1Q8BXJ2 Gm24431-201ENSMUST00000104073 66 ntBASIC1.19□□□□□ -2.22
Trerf1Q8BXJ2 Gm22205-201ENSMUST00000122655 71 ntBASIC1.19□□□□□ -2.22
Trerf1Q8BXJ2 Gm22732-201ENSMUST00000158093 121 ntBASIC1.19□□□□□ -2.22
Trerf1Q8BXJ2 Gm25014-201ENSMUST00000158401 103 ntBASIC1.19□□□□□ -2.22
Trerf1Q8BXJ2 Gm20118-201ENSMUST00000187207 162 ntBASIC1.19□□□□□ -2.22
Trerf1Q8BXJ2 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.19□□□□□ -2.22
Trerf1Q8BXJ2 Gm25683-201ENSMUST00000083940 131 ntBASIC1.19□□□□□ -2.22
Trerf1Q8BXJ2 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.18□□□□□ -2.22
Trerf1Q8BXJ2 Mir709-201ENSMUST00000102190 88 ntBASIC1.18□□□□□ -2.22
Trerf1Q8BXJ2 Gm22544-201ENSMUST00000104349 127 ntBASIC1.18□□□□□ -2.22
Trerf1Q8BXJ2 Mir1187-201ENSMUST00000116936 122 ntBASIC1.18□□□□□ -2.22
Trerf1Q8BXJ2 Gm26478-201ENSMUST00000122611 133 ntBASIC1.18□□□□□ -2.22
Trerf1Q8BXJ2 Gm24401-201ENSMUST00000157868 91 ntBASIC1.18□□□□□ -2.22
Trerf1Q8BXJ2 Mir1954-201ENSMUST00000175595 86 ntBASIC1.18□□□□□ -2.22
Trerf1Q8BXJ2 Gm26712-201ENSMUST00000180813 217 ntBASIC1.18□□□□□ -2.22
Trerf1Q8BXJ2 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.18□□□□□ -2.22
Trerf1Q8BXJ2 Gm25854-201ENSMUST00000082792 72 ntBASIC1.18□□□□□ -2.22
Trerf1Q8BXJ2 Gm26062-201ENSMUST00000083379 107 ntBASIC1.18□□□□□ -2.22
Trerf1Q8BXJ2 Gm24271-201ENSMUST00000102327 111 ntBASIC1.17□□□□□ -2.22
Trerf1Q8BXJ2 Gm11333-201ENSMUST00000119479 148 ntBASIC1.17□□□□□ -2.22
Trerf1Q8BXJ2 Gm23340-201ENSMUST00000158955 123 ntBASIC1.17□□□□□ -2.22
Trerf1Q8BXJ2 Gm27987-201ENSMUST00000184023 93 ntBASIC1.17□□□□□ -2.22
Trerf1Q8BXJ2 Mir344-201ENSMUST00000083634 95 ntBASIC1.17□□□□□ -2.22
Trerf1Q8BXJ2 Gm23347-201ENSMUST00000083823 82 ntBASIC1.17□□□□□ -2.22
Trerf1Q8BXJ2 Gm24988-201ENSMUST00000104460 121 ntBASIC1.16□□□□□ -2.22
Trerf1Q8BXJ2 Gm25322-201ENSMUST00000122556 104 ntBASIC1.16□□□□□ -2.22
Trerf1Q8BXJ2 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.16□□□□□ -2.22
Trerf1Q8BXJ2 Gm22801-201ENSMUST00000175624 84 ntBASIC1.16□□□□□ -2.22
Trerf1Q8BXJ2 Gm22887-201ENSMUST00000178586 107 ntBASIC1.16□□□□□ -2.22
Trerf1Q8BXJ2 Mir6985-201ENSMUST00000184641 61 ntBASIC1.16□□□□□ -2.22
Trerf1Q8BXJ2 Gm38295-201ENSMUST00000191951 151 ntBASIC1.16□□□□□ -2.22
Trerf1Q8BXJ2 Gm22980-201ENSMUST00000082608 70 ntBASIC1.16□□□□□ -2.22
Trerf1Q8BXJ2 Gm23661-201ENSMUST00000122630 87 ntBASIC1.15□□□□□ -2.23
Trerf1Q8BXJ2 Gm23900-201ENSMUST00000157569 108 ntBASIC1.15□□□□□ -2.23
Trerf1Q8BXJ2 Gm26089-201ENSMUST00000157898 107 ntBASIC1.15□□□□□ -2.23
Trerf1Q8BXJ2 Gm24221-201ENSMUST00000158833 313 ntBASIC1.15□□□□□ -2.23
Trerf1Q8BXJ2 Gm42506-201ENSMUST00000202009 150 ntBASIC1.15□□□□□ -2.23
Trerf1Q8BXJ2 Gm24311-201ENSMUST00000082570 104 ntBASIC1.15□□□□□ -2.23
Trerf1Q8BXJ2 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.14□□□□□ -2.23
Trerf1Q8BXJ2 Gm25417-201ENSMUST00000104212 131 ntBASIC1.14□□□□□ -2.23
Trerf1Q8BXJ2 Gm28767-201ENSMUST00000188601 114 ntBASIC1.14□□□□□ -2.23
Trerf1Q8BXJ2 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.14□□□□□ -2.23
Trerf1Q8BXJ2 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Trerf1Q8BXJ2 Gm23881-201ENSMUST00000116872 66 ntBASIC1.13□□□□□ -2.23
Trerf1Q8BXJ2 Gm12469-201ENSMUST00000117623 207 ntBASIC1.13□□□□□ -2.23
Trerf1Q8BXJ2 Gm23761-201ENSMUST00000158347 104 ntBASIC1.13□□□□□ -2.23
Trerf1Q8BXJ2 Mir29a-201ENSMUST00000083676 88 ntBASIC1.13□□□□□ -2.23
Trerf1Q8BXJ2 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Trerf1Q8BXJ2 Gm24868-201ENSMUST00000157265 136 ntBASIC1.12□□□□□ -2.23
Trerf1Q8BXJ2 Gm24199-201ENSMUST00000157808 136 ntBASIC1.12□□□□□ -2.23
Trerf1Q8BXJ2 Gm24077-201ENSMUST00000158183 136 ntBASIC1.12□□□□□ -2.23
Trerf1Q8BXJ2 Gm25901-201ENSMUST00000158494 130 ntBASIC1.12□□□□□ -2.23
Trerf1Q8BXJ2 Gm25768-201ENSMUST00000158570 98 ntBASIC1.12□□□□□ -2.23
Trerf1Q8BXJ2 Gm22565-201ENSMUST00000175540 69 ntBASIC1.12□□□□□ -2.23
Trerf1Q8BXJ2 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Trerf1Q8BXJ2 Gm25964-201ENSMUST00000157171 97 ntBASIC1.11□□□□□ -2.23
Trerf1Q8BXJ2 Gm26133-201ENSMUST00000157363 100 ntBASIC1.11□□□□□ -2.23
Trerf1Q8BXJ2 Gm25056-201ENSMUST00000157372 62 ntBASIC1.11□□□□□ -2.23
Trerf1Q8BXJ2 Gm24728-201ENSMUST00000158226 125 ntBASIC1.11□□□□□ -2.23
Trerf1Q8BXJ2 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.11□□□□□ -2.23
Trerf1Q8BXJ2 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.11□□□□□ -2.23
Trerf1Q8BXJ2 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.11□□□□□ -2.23
Trerf1Q8BXJ2 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.11□□□□□ -2.23
Trerf1Q8BXJ2 Snord60-201ENSMUST00000082834 78 ntBASIC1.11□□□□□ -2.23
Trerf1Q8BXJ2 Gm23376-201ENSMUST00000082938 160 ntBASIC1.11□□□□□ -2.23
Trerf1Q8BXJ2 Gm23857-201ENSMUST00000158379 111 ntBASIC1.1□□□□□ -2.23
Trerf1Q8BXJ2 Mir6381-201ENSMUST00000183426 87 ntBASIC1.1□□□□□ -2.23
Trerf1Q8BXJ2 Mir6390-201ENSMUST00000184405 129 ntBASIC1.1□□□□□ -2.23
Trerf1Q8BXJ2 Gm44458-201ENSMUST00000196594 143 ntBASIC1.1□□□□□ -2.23
Trerf1Q8BXJ2 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Trerf1Q8BXJ2 Gm25110-201ENSMUST00000116684 121 ntBASIC1.09□□□□□ -2.23
Trerf1Q8BXJ2 Gm25775-201ENSMUST00000116716 121 ntBASIC1.09□□□□□ -2.23
Trerf1Q8BXJ2 Gm24795-201ENSMUST00000116737 121 ntBASIC1.09□□□□□ -2.23
Trerf1Q8BXJ2 Gm25171-201ENSMUST00000116926 121 ntBASIC1.09□□□□□ -2.23
Trerf1Q8BXJ2 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Trerf1Q8BXJ2 Gm25160-201ENSMUST00000158914 102 ntBASIC1.09□□□□□ -2.23
Trerf1Q8BXJ2 Gm25950-201ENSMUST00000175331 100 ntBASIC1.09□□□□□ -2.23
Trerf1Q8BXJ2 Gm23306-201ENSMUST00000179058 105 ntBASIC1.09□□□□□ -2.23
Trerf1Q8BXJ2 Gm25354-201ENSMUST00000179110 105 ntBASIC1.09□□□□□ -2.23
Trerf1Q8BXJ2 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Trerf1Q8BXJ2 Gm26207-201ENSMUST00000082909 104 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 711.8 ms