Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Snord64-201ENSMUST00000104003 67 ntBASIC0.12□□□□□ -2.39
Smarca1Q6PGB8 Gm22772-201ENSMUST00000104451 121 ntBASIC0.12□□□□□ -2.39
Smarca1Q6PGB8 Gm23654-201ENSMUST00000116758 126 ntBASIC0.12□□□□□ -2.39
Smarca1Q6PGB8 Gm25014-201ENSMUST00000158401 103 ntBASIC0.12□□□□□ -2.39
Smarca1Q6PGB8 Gm23351-201ENSMUST00000158427 125 ntBASIC0.12□□□□□ -2.39
Smarca1Q6PGB8 Gm22100-201ENSMUST00000157926 63 ntBASIC0.11□□□□□ -2.39
Smarca1Q6PGB8 Gm22509-201ENSMUST00000082775 107 ntBASIC0.11□□□□□ -2.39
Smarca1Q6PGB8 Mir18-201ENSMUST00000083469 96 ntBASIC0.11□□□□□ -2.39
Smarca1Q6PGB8 Gm25006-201ENSMUST00000083813 107 ntBASIC0.11□□□□□ -2.39
Smarca1Q6PGB8 Gm24903-201ENSMUST00000158131 126 ntBASIC0.1□□□□□ -2.39
Smarca1Q6PGB8 Gm25618-201ENSMUST00000179484 107 ntBASIC0.1□□□□□ -2.39
Smarca1Q6PGB8 Gm23036-201ENSMUST00000157885 99 ntBASIC0.09□□□□□ -2.4
Smarca1Q6PGB8 Gm38295-201ENSMUST00000191951 151 ntBASIC0.09□□□□□ -2.4
Smarca1Q6PGB8 Gm23749-201ENSMUST00000104223 131 ntBASIC0.08□□□□□ -2.4
Smarca1Q6PGB8 Gm24648-201ENSMUST00000157111 132 ntBASIC0.08□□□□□ -2.4
Smarca1Q6PGB8 Gm22558-201ENSMUST00000157326 95 ntBASIC0.08□□□□□ -2.4
Smarca1Q6PGB8 Gm24399-201ENSMUST00000157869 74 ntBASIC0.08□□□□□ -2.4
Smarca1Q6PGB8 Gm28270-201ENSMUST00000188550 109 ntBASIC0.08□□□□□ -2.4
Smarca1Q6PGB8 Gm28328-201ENSMUST00000188869 109 ntBASIC0.08□□□□□ -2.4
Smarca1Q6PGB8 Gm29047-201ENSMUST00000189816 108 ntBASIC0.08□□□□□ -2.4
Smarca1Q6PGB8 Gm22981-201ENSMUST00000082611 75 ntBASIC0.08□□□□□ -2.4
Smarca1Q6PGB8 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Smarca1Q6PGB8 Gm25756-201ENSMUST00000103990 136 ntBASIC0.07□□□□□ -2.4
Smarca1Q6PGB8 Gm24884-201ENSMUST00000158784 119 ntBASIC0.07□□□□□ -2.4
Smarca1Q6PGB8 Gm38298-201ENSMUST00000193578 118 ntBASIC0.07□□□□□ -2.4
Smarca1Q6PGB8 Gm43907-201ENSMUST00000203128 117 ntBASIC0.07□□□□□ -2.4
Smarca1Q6PGB8 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.07□□□□□ -2.4
Smarca1Q6PGB8 Gm42845-201ENSMUST00000197766 105 ntBASIC0.06□□□□□ -2.4
Smarca1Q6PGB8 Gm23384-201ENSMUST00000158593 103 ntBASIC0.05□□□□□ -2.4
Smarca1Q6PGB8 Gm25366-201ENSMUST00000158845 124 ntBASIC0.05□□□□□ -2.4
Smarca1Q6PGB8 Mir3065-201ENSMUST00000198674 87 ntBASIC0.05□□□□□ -2.4
Smarca1Q6PGB8 Gm23344-201ENSMUST00000083818 68 ntBASIC0.05□□□□□ -2.4
Smarca1Q6PGB8 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.04□□□□□ -2.4
Smarca1Q6PGB8 Gm22212-201ENSMUST00000158096 106 ntBASIC0.04□□□□□ -2.4
Smarca1Q6PGB8 Gm44328-201ENSMUST00000199331 75 ntBASIC0.04□□□□□ -2.4
Smarca1Q6PGB8 Gm22368-201ENSMUST00000102416 109 ntBASIC0.03□□□□□ -2.4
Smarca1Q6PGB8 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.03□□□□□ -2.4
Smarca1Q6PGB8 Gm22503-201ENSMUST00000158983 115 ntBASIC0.02□□□□□ -2.41
Smarca1Q6PGB8 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC0.02□□□□□ -2.41
Smarca1Q6PGB8 Gm26207-201ENSMUST00000082909 104 ntBASIC0.02□□□□□ -2.41
Smarca1Q6PGB8 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Smarca1Q6PGB8 Snord80-201ENSMUST00000083801 81 ntBASIC0.02□□□□□ -2.41
Smarca1Q6PGB8 Gm10813-201ENSMUST00000099936 90 ntBASIC0.02□□□□□ -2.41
Smarca1Q6PGB8 Gm24686-201ENSMUST00000157755 93 ntBASIC0.01□□□□□ -2.41
Smarca1Q6PGB8 Gm22962-201ENSMUST00000157962 73 ntBASIC0.01□□□□□ -2.41
Smarca1Q6PGB8 Gm23291-201ENSMUST00000175611 78 ntBASIC0.01□□□□□ -2.41
Smarca1Q6PGB8 Gm2077-201ENSMUST00000195017 319 ntBASIC0.01□□□□□ -2.41
Smarca1Q6PGB8 Gm23507-201ENSMUST00000083078 107 ntBASIC0.01□□□□□ -2.41
Smarca1Q6PGB8 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0□□□□□ -2.41
Smarca1Q6PGB8 Gm23012-201ENSMUST00000104149 83 ntBASIC0□□□□□ -2.41
Smarca1Q6PGB8 Snord2-201ENSMUST00000157899 69 ntBASIC0□□□□□ -2.41
Smarca1Q6PGB8 Gm25978-201ENSMUST00000158698 90 ntBASIC0□□□□□ -2.41
Smarca1Q6PGB8 Gm45429-201ENSMUST00000209527 172 ntBASIC0□□□□□ -2.41
Smarca1Q6PGB8 Gm22297-201ENSMUST00000083312 106 ntBASIC0□□□□□ -2.41
Smarca1Q6PGB8 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Smarca1Q6PGB8 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.01□□□□□ -2.41
Smarca1Q6PGB8 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.01□□□□□ -2.41
Smarca1Q6PGB8 Mir382-201ENSMUST00000083494 76 ntBASIC-0.01□□□□□ -2.41
Smarca1Q6PGB8 Snord78-201ENSMUST00000104032 66 ntBASIC-0.02□□□□□ -2.41
Smarca1Q6PGB8 Gm25887-201ENSMUST00000157777 84 ntBASIC-0.02□□□□□ -2.41
Smarca1Q6PGB8 Gm22286-201ENSMUST00000179708 107 ntBASIC-0.02□□□□□ -2.41
Smarca1Q6PGB8 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.02□□□□□ -2.41
Smarca1Q6PGB8 Gm23065-201ENSMUST00000158236 130 ntBASIC-0.04□□□□□ -2.42
Smarca1Q6PGB8 AC164561.1-201ENSMUST00000220414 115 ntBASIC-0.04□□□□□ -2.42
Smarca1Q6PGB8 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.04□□□□□ -2.42
Smarca1Q6PGB8 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.05□□□□□ -2.42
Smarca1Q6PGB8 Gm24947-201ENSMUST00000158334 110 ntBASIC-0.05□□□□□ -2.42
Smarca1Q6PGB8 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.05□□□□□ -2.42
Smarca1Q6PGB8 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC-0.06□□□□□ -2.42
Smarca1Q6PGB8 Gm43324-201ENSMUST00000197482 289 ntBASIC-0.06□□□□□ -2.42
Smarca1Q6PGB8 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.06□□□□□ -2.42
Smarca1Q6PGB8 Snord85-201ENSMUST00000083262 73 ntBASIC-0.06□□□□□ -2.42
Smarca1Q6PGB8 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.06□□□□□ -2.42
Smarca1Q6PGB8 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.07□□□□□ -2.42
Smarca1Q6PGB8 Mir191-201ENSMUST00000196210 74 ntBASIC-0.07□□□□□ -2.42
Smarca1Q6PGB8 Gm25635-201ENSMUST00000082675 131 ntBASIC-0.07□□□□□ -2.42
Smarca1Q6PGB8 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-0.08□□□□□ -2.42
Smarca1Q6PGB8 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.08□□□□□ -2.42
Smarca1Q6PGB8 Gm25370-201ENSMUST00000158159 94 ntBASIC-0.08□□□□□ -2.42
Smarca1Q6PGB8 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.08□□□□□ -2.42
Smarca1Q6PGB8 Gm23578-201ENSMUST00000103943 104 ntBASIC-0.09□□□□□ -2.42
Smarca1Q6PGB8 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.09□□□□□ -2.42
Smarca1Q6PGB8 Mir672-201ENSMUST00000102331 100 ntBASIC-0.1□□□□□ -2.43
Smarca1Q6PGB8 Gm22319-201ENSMUST00000157147 122 ntBASIC-0.1□□□□□ -2.43
Smarca1Q6PGB8 Gm22336-201ENSMUST00000157719 107 ntBASIC-0.1□□□□□ -2.43
Smarca1Q6PGB8 Gm20734-201ENSMUST00000216939 193 ntBASIC-0.1□□□□□ -2.43
Smarca1Q6PGB8 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.11□□□□□ -2.43
Smarca1Q6PGB8 Gm12086-201ENSMUST00000120863 228 ntBASIC-0.11□□□□□ -2.43
Smarca1Q6PGB8 Gm22384-201ENSMUST00000158187 104 ntBASIC-0.11□□□□□ -2.43
Smarca1Q6PGB8 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.11□□□□□ -2.43
Smarca1Q6PGB8 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.11□□□□□ -2.43
Smarca1Q6PGB8 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.11□□□□□ -2.43
Smarca1Q6PGB8 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.11□□□□□ -2.43
Smarca1Q6PGB8 Gm25425-201ENSMUST00000157611 96 ntBASIC-0.12□□□□□ -2.43
Smarca1Q6PGB8 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.12□□□□□ -2.43
Smarca1Q6PGB8 Gm43977-201ENSMUST00000203970 189 ntBASIC-0.12□□□□□ -2.43
Smarca1Q6PGB8 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.13□□□□□ -2.43
Smarca1Q6PGB8 Mir29a-201ENSMUST00000083676 88 ntBASIC-0.13□□□□□ -2.43
Smarca1Q6PGB8 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.14□□□□□ -2.43
Smarca1Q6PGB8 Mir509-201ENSMUST00000196089 75 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 322.5 ms