Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm22679-201ENSMUST00000116975 100 ntBASIC1,82□□□□□ -2,12
Scaf1Q5U4C3 Gm26029-201ENSMUST00000158659 132 ntBASIC1,82□□□□□ -2,12
Scaf1Q5U4C3 Gm22663-201ENSMUST00000158721 102 ntBASIC1,82□□□□□ -2,12
Scaf1Q5U4C3 Snord50a-201ENSMUST00000178154 72 ntBASIC1,82□□□□□ -2,12
Scaf1Q5U4C3 Gm24463-201ENSMUST00000178417 72 ntBASIC1,82□□□□□ -2,12
Scaf1Q5U4C3 Gm44962-201ENSMUST00000206460 279 ntBASIC1,82□□□□□ -2,12
Scaf1Q5U4C3 Mir7091-201ENSMUST00000184075 79 ntBASIC1,81□□□□□ -2,12
Scaf1Q5U4C3 Gm25274-201ENSMUST00000104296 135 ntBASIC1,8□□□□□ -2,12
Scaf1Q5U4C3 Gm14947-201ENSMUST00000133704 303 ntBASIC1,8□□□□□ -2,12
Scaf1Q5U4C3 Mir15a-201ENSMUST00000175266 84 ntBASIC1,8□□□□□ -2,12
Scaf1Q5U4C3 Gm25170-201ENSMUST00000104191 129 ntBASIC1,79□□□□□ -2,12
Scaf1Q5U4C3 Mir100-201ENSMUST00000175270 80 ntBASIC1,79□□□□□ -2,12
Scaf1Q5U4C3 Gm27686-201ENSMUST00000185123 91 ntBASIC1,79□□□□□ -2,12
Scaf1Q5U4C3 Gm29535-201ENSMUST00000185723 109 ntBASIC1,79□□□□□ -2,12
Scaf1Q5U4C3 Gm28143-201ENSMUST00000191082 109 ntBASIC1,79□□□□□ -2,12
Scaf1Q5U4C3 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1,79□□□□□ -2,12
Scaf1Q5U4C3 AC122327.1-201ENSMUST00000220778 108 ntBASIC1,79□□□□□ -2,12
Scaf1Q5U4C3 Gm24686-201ENSMUST00000157755 93 ntBASIC1,78□□□□□ -2,12
Scaf1Q5U4C3 Gm24154-201ENSMUST00000175261 130 ntBASIC1,78□□□□□ -2,12
Scaf1Q5U4C3 Mir1954-201ENSMUST00000175595 86 ntBASIC1,78□□□□□ -2,12
Scaf1Q5U4C3 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1,77□□□□□ -2,13
Scaf1Q5U4C3 Gm22788-201ENSMUST00000157876 61 ntBASIC1,77□□□□□ -2,13
Scaf1Q5U4C3 Gm22140-201ENSMUST00000158745 120 ntBASIC1,77□□□□□ -2,13
Scaf1Q5U4C3 Mir376b-201ENSMUST00000195930 82 ntBASIC1,77□□□□□ -2,13
Scaf1Q5U4C3 Gm24208-201ENSMUST00000082783 135 ntBASIC1,77□□□□□ -2,13
Scaf1Q5U4C3 Gm25681-201ENSMUST00000083938 106 ntBASIC1,77□□□□□ -2,13
Scaf1Q5U4C3 Gm25416-201ENSMUST00000104221 107 ntBASIC1,76□□□□□ -2,13
Scaf1Q5U4C3 Gm22069-201ENSMUST00000179911 107 ntBASIC1,76□□□□□ -2,13
Scaf1Q5U4C3 Gm22780-201ENSMUST00000104084 132 ntBASIC1,75□□□□□ -2,13
Scaf1Q5U4C3 Gm23329-201ENSMUST00000157415 108 ntBASIC1,75□□□□□ -2,13
Scaf1Q5U4C3 Gm20108-201ENSMUST00000219977 153 ntBASIC1,75□□□□□ -2,13
Scaf1Q5U4C3 Gm22454-201ENSMUST00000082583 107 ntBASIC1,75□□□□□ -2,13
Scaf1Q5U4C3 Gm45265-201ENSMUST00000210852 2497 ntBASIC1,75□□□□□ -2,13
Scaf1Q5U4C3 Gm26301-201ENSMUST00000104813 95 ntBASIC1,74□□□□□ -2,13
Scaf1Q5U4C3 Gm25045-201ENSMUST00000122670 99 ntBASIC1,74□□□□□ -2,13
Scaf1Q5U4C3 Gm22943-201ENSMUST00000158564 76 ntBASIC1,74□□□□□ -2,13
Scaf1Q5U4C3 Mir7059-201ENSMUST00000184825 59 ntBASIC1,74□□□□□ -2,13
Scaf1Q5U4C3 Mir377-201ENSMUST00000083504 68 ntBASIC1,74□□□□□ -2,13
Scaf1Q5U4C3 Gm22354-201ENSMUST00000083919 70 ntBASIC1,74□□□□□ -2,13
Scaf1Q5U4C3 Gm12432-201ENSMUST00000119540 186 ntBASIC1,73□□□□□ -2,13
Scaf1Q5U4C3 Mir7063-201ENSMUST00000184158 91 ntBASIC1,73□□□□□ -2,13
Scaf1Q5U4C3 DQ267101-201ENSMUST00000082562 73 ntBASIC1,73□□□□□ -2,13
Scaf1Q5U4C3 Gm22827-201ENSMUST00000083766 107 ntBASIC1,73□□□□□ -2,13
Scaf1Q5U4C3 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1,72□□□□□ -2,13
Scaf1Q5U4C3 Gm23989-201ENSMUST00000117030 66 ntBASIC1,72□□□□□ -2,13
Scaf1Q5U4C3 Gm26425-201ENSMUST00000122529 82 ntBASIC1,72□□□□□ -2,13
Scaf1Q5U4C3 Gm24288-201ENSMUST00000157630 144 ntBASIC1,72□□□□□ -2,13
Scaf1Q5U4C3 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1,72□□□□□ -2,13
Scaf1Q5U4C3 Mir33-201ENSMUST00000083531 69 ntBASIC1,72□□□□□ -2,13
Scaf1Q5U4C3 Mir29a-201ENSMUST00000083676 88 ntBASIC1,72□□□□□ -2,13
Scaf1Q5U4C3 Snord71-201ENSMUST00000104361 85 ntBASIC1,71□□□□□ -2,14
Scaf1Q5U4C3 Gm22074-201ENSMUST00000158595 113 ntBASIC1,71□□□□□ -2,14
Scaf1Q5U4C3 Gm23416-201ENSMUST00000175520 95 ntBASIC1,71□□□□□ -2,14
Scaf1Q5U4C3 Gm25633-201ENSMUST00000178565 107 ntBASIC1,71□□□□□ -2,14
Scaf1Q5U4C3 Gm22805-201ENSMUST00000082739 107 ntBASIC1,71□□□□□ -2,14
Scaf1Q5U4C3 Gm24697-201ENSMUST00000083881 107 ntBASIC1,7□□□□□ -2,14
Scaf1Q5U4C3 Gm24342-201ENSMUST00000103907 104 ntBASIC1,69□□□□□ -2,14
Scaf1Q5U4C3 Gm26478-201ENSMUST00000122611 133 ntBASIC1,69□□□□□ -2,14
Scaf1Q5U4C3 n-R5s6-201ENSMUST00000122663 88 ntBASIC1,69□□□□□ -2,14
Scaf1Q5U4C3 Gm24895-201ENSMUST00000122742 74 ntBASIC1,69□□□□□ -2,14
Scaf1Q5U4C3 Gm23636-201ENSMUST00000175070 95 ntBASIC1,69□□□□□ -2,14
Scaf1Q5U4C3 AC157602.1-201ENSMUST00000197446 105 ntBASIC1,69□□□□□ -2,14
Scaf1Q5U4C3 Gm23991-201ENSMUST00000117033 93 ntBASIC1,68□□□□□ -2,14
Scaf1Q5U4C3 Mir7010-201ENSMUST00000183464 63 ntBASIC1,68□□□□□ -2,14
Scaf1Q5U4C3 n-R5s96-201ENSMUST00000082574 124 ntBASIC1,68□□□□□ -2,14
Scaf1Q5U4C3 Mir344-201ENSMUST00000083634 95 ntBASIC1,68□□□□□ -2,14
Scaf1Q5U4C3 Mir6394-201ENSMUST00000184738 99 ntBASIC1,67□□□□□ -2,14
Scaf1Q5U4C3 Mir7052-201ENSMUST00000184821 65 ntBASIC1,67□□□□□ -2,14
Scaf1Q5U4C3 Gm22652-201ENSMUST00000083207 131 ntBASIC1,67□□□□□ -2,14
Scaf1Q5U4C3 Gm22786-201ENSMUST00000104086 122 ntBASIC1,66□□□□□ -2,14
Scaf1Q5U4C3 Gm25112-201ENSMUST00000122680 104 ntBASIC1,66□□□□□ -2,14
Scaf1Q5U4C3 Gm43927-201ENSMUST00000204599 117 ntBASIC1,66□□□□□ -2,14
Scaf1Q5U4C3 Gm44211-201ENSMUST00000204867 145 ntBASIC1,66□□□□□ -2,14
Scaf1Q5U4C3 Gm5581-201ENSMUST00000072940 2550 ntBASIC1,65□□□□□ -2,14
Scaf1Q5U4C3 Mir216b-201ENSMUST00000102363 86 ntBASIC1,65□□□□□ -2,15
Scaf1Q5U4C3 Gm22071-201ENSMUST00000116857 83 ntBASIC1,65□□□□□ -2,15
Scaf1Q5U4C3 Gm13065-201ENSMUST00000119178 141 ntBASIC1,65□□□□□ -2,15
Scaf1Q5U4C3 Gm27639-201ENSMUST00000184937 85 ntBASIC1,65□□□□□ -2,15
Scaf1Q5U4C3 Mir509-201ENSMUST00000196089 75 ntBASIC1,65□□□□□ -2,15
Scaf1Q5U4C3 Mir1949-202ENSMUST00000199259 70 ntBASIC1,65□□□□□ -2,15
Scaf1Q5U4C3 AC160550.1-201ENSMUST00000228659 181 ntBASIC1,65□□□□□ -2,15
Scaf1Q5U4C3 Mir196b-201ENSMUST00000083509 85 ntBASIC1,65□□□□□ -2,15
Scaf1Q5U4C3 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1,64□□□□□ -2,15
Scaf1Q5U4C3 Gm22677-201ENSMUST00000116977 108 ntBASIC1,64□□□□□ -2,15
Scaf1Q5U4C3 Mir6342-201ENSMUST00000183870 125 ntBASIC1,64□□□□□ -2,15
Scaf1Q5U4C3 Gm27656-201ENSMUST00000185055 80 ntBASIC1,64□□□□□ -2,15
Scaf1Q5U4C3 Gm38295-201ENSMUST00000191951 151 ntBASIC1,64□□□□□ -2,15
Scaf1Q5U4C3 Gm25040-201ENSMUST00000103877 66 ntBASIC1,63□□□□□ -2,15
Scaf1Q5U4C3 Mir6985-201ENSMUST00000184641 61 ntBASIC1,63□□□□□ -2,15
Scaf1Q5U4C3 Gm26441-201ENSMUST00000082590 104 ntBASIC1,63□□□□□ -2,15
Scaf1Q5U4C3 Snora75-201ENSMUST00000082903 133 ntBASIC1,63□□□□□ -2,15
Scaf1Q5U4C3 Gm22100-201ENSMUST00000157926 63 ntBASIC1,62□□□□□ -2,15
Scaf1Q5U4C3 Gm27717-201ENSMUST00000183933 151 ntBASIC1,62□□□□□ -2,15
Scaf1Q5U4C3 Gm25138-201ENSMUST00000083248 136 ntBASIC1,62□□□□□ -2,15
Scaf1Q5U4C3 Mir466l-201ENSMUST00000104866 121 ntBASIC1,61□□□□□ -2,15
Scaf1Q5U4C3 Gm22983-201ENSMUST00000158308 104 ntBASIC1,61□□□□□ -2,15
Scaf1Q5U4C3 Scarna3a-201ENSMUST00000158911 140 ntBASIC1,61□□□□□ -2,15
Scaf1Q5U4C3 Gm23291-201ENSMUST00000175611 78 ntBASIC1,61□□□□□ -2,15
Scaf1Q5U4C3 Gm25229-201ENSMUST00000178587 79 ntBASIC1,61□□□□□ -2,15
Scaf1Q5U4C3 Gm43907-201ENSMUST00000203128 117 ntBASIC1,61□□□□□ -2,15
Retrieved 100 of 76,532 protein–RNA pairs in 123,3 ms