Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm25424-201ENSMUST00000157612 58 ntBASIC-3.42□□□□□ -2.96
Ccdc88bQ4QRL3 Gm45655-201ENSMUST00000211625 160 ntBASIC-3.42□□□□□ -2.96
Ccdc88bQ4QRL3 Gm22459-201ENSMUST00000082577 108 ntBASIC-3.42□□□□□ -2.96
Ccdc88bQ4QRL3 Gm25635-201ENSMUST00000082675 131 ntBASIC-3.42□□□□□ -2.96
Ccdc88bQ4QRL3 Gm23707-201ENSMUST00000104366 125 ntBASIC-3.43□□□□□ -2.96
Ccdc88bQ4QRL3 Gm14574-201ENSMUST00000120644 279 ntBASIC-3.43□□□□□ -2.96
Ccdc88bQ4QRL3 Gm29818-201ENSMUST00000218070 165 ntBASIC-3.43□□□□□ -2.96
Ccdc88bQ4QRL3 Gm24762-201ENSMUST00000083689 104 ntBASIC-3.43□□□□□ -2.96
Ccdc88bQ4QRL3 Gm23344-201ENSMUST00000083818 68 ntBASIC-3.43□□□□□ -2.96
Ccdc88bQ4QRL3 Gm22842-201ENSMUST00000157709 118 ntBASIC-3.44□□□□□ -2.96
Ccdc88bQ4QRL3 Gm28849-201ENSMUST00000188127 174 ntBASIC-3.44□□□□□ -2.96
Ccdc88bQ4QRL3 Gm25862-201ENSMUST00000158250 129 ntBASIC-3.45□□□□□ -2.96
Ccdc88bQ4QRL3 Gm24499-201ENSMUST00000158446 104 ntBASIC-3.45□□□□□ -2.96
Ccdc88bQ4QRL3 Gm25267-201ENSMUST00000158522 63 ntBASIC-3.45□□□□□ -2.96
Ccdc88bQ4QRL3 Gm23474-201ENSMUST00000158884 75 ntBASIC-3.45□□□□□ -2.96
Ccdc88bQ4QRL3 Gm27937-201ENSMUST00000183605 88 ntBASIC-3.45□□□□□ -2.96
Ccdc88bQ4QRL3 Gm21940-201ENSMUST00000204940 2278 ntBASIC-3.45□□□□□ -2.96
Ccdc88bQ4QRL3 Gm22834-201ENSMUST00000102021 79 ntBASIC-3.46□□□□□ -2.96
Ccdc88bQ4QRL3 Gm22708-201ENSMUST00000158987 103 ntBASIC-3.46□□□□□ -2.96
Ccdc88bQ4QRL3 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC-3.46□□□□□ -2.96
Ccdc88bQ4QRL3 Gm26287-201ENSMUST00000158887 81 ntBASIC-3.47□□□□□ -2.96
Ccdc88bQ4QRL3 Mir802-201ENSMUST00000103258 97 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 Gm23817-201ENSMUST00000158449 104 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 Gm25749-201ENSMUST00000175485 111 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 Gm24111-201ENSMUST00000175491 97 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 Gm23306-201ENSMUST00000179058 105 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 Gm27410-201ENSMUST00000183851 115 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 Gm43977-201ENSMUST00000203970 189 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 AC145736.2-201ENSMUST00000216305 365 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 Gm12584-201ENSMUST00000117109 1105 ntBASIC-3.48□□□□□ -2.97
Ccdc88bQ4QRL3 Mir2136-201ENSMUST00000158781 75 ntBASIC-3.48□□□□□ -2.97
Ccdc88bQ4QRL3 Gm22631-201ENSMUST00000179656 94 ntBASIC-3.48□□□□□ -2.97
Ccdc88bQ4QRL3 Gm28506-201ENSMUST00000189937 150 ntBASIC-3.48□□□□□ -2.97
Ccdc88bQ4QRL3 Mir3535-201ENSMUST00000197651 147 ntBASIC-3.48□□□□□ -2.97
Ccdc88bQ4QRL3 Gm25644-201ENSMUST00000083209 107 ntBASIC-3.49□□□□□ -2.97
Ccdc88bQ4QRL3 Gm22598-201ENSMUST00000157600 127 ntBASIC-3.5□□□□□ -2.97
Ccdc88bQ4QRL3 Gm25909-201ENSMUST00000157619 121 ntBASIC-3.5□□□□□ -2.97
Ccdc88bQ4QRL3 Snora15-201ENSMUST00000177461 131 ntBASIC-3.5□□□□□ -2.97
Ccdc88bQ4QRL3 AC124739.2-201ENSMUST00000222201 109 ntBASIC-3.5□□□□□ -2.97
Ccdc88bQ4QRL3 Gm23303-201ENSMUST00000082714 152 ntBASIC-3.51□□□□□ -2.97
Ccdc88bQ4QRL3 Mir201-201ENSMUST00000083470 66 ntBASIC-3.51□□□□□ -2.97
Ccdc88bQ4QRL3 Gm25937-201ENSMUST00000083912 107 ntBASIC-3.51□□□□□ -2.97
Ccdc88bQ4QRL3 Gm22946-201ENSMUST00000158558 82 ntBASIC-3.52□□□□□ -2.97
Ccdc88bQ4QRL3 Gm35558-203ENSMUST00000222264 204 ntBASIC-3.52□□□□□ -2.97
Ccdc88bQ4QRL3 Rny3-201ENSMUST00000083011 102 ntBASIC-3.52□□□□□ -2.97
Ccdc88bQ4QRL3 Gm24697-201ENSMUST00000083881 107 ntBASIC-3.52□□□□□ -2.97
Ccdc88bQ4QRL3 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-3.53□□□□□ -2.97
Ccdc88bQ4QRL3 Gm24960-201ENSMUST00000157923 90 ntBASIC-3.53□□□□□ -2.97
Ccdc88bQ4QRL3 Gm22259-201ENSMUST00000178926 107 ntBASIC-3.53□□□□□ -2.97
Ccdc88bQ4QRL3 Gm44489-201ENSMUST00000104619 97 ntBASIC-3.54□□□□□ -2.98
Ccdc88bQ4QRL3 Gm27995-201ENSMUST00000184402 100 ntBASIC-3.54□□□□□ -2.98
Ccdc88bQ4QRL3 Mir186-201ENSMUST00000083497 71 ntBASIC-3.54□□□□□ -2.98
Ccdc88bQ4QRL3 Gm22348-201ENSMUST00000178674 79 ntBASIC-3.54□□□□□ -2.98
Ccdc88bQ4QRL3 Gm24490-201ENSMUST00000083803 98 ntBASIC-3.54□□□□□ -2.98
Ccdc88bQ4QRL3 Mir669d-2-201ENSMUST00000116854 86 ntBASIC-3.55□□□□□ -2.98
Ccdc88bQ4QRL3 Gm14502-201ENSMUST00000118154 113 ntBASIC-3.55□□□□□ -2.98
Ccdc88bQ4QRL3 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-3.55□□□□□ -2.98
Ccdc88bQ4QRL3 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-3.55□□□□□ -2.98
Ccdc88bQ4QRL3 Mir5619-201ENSMUST00000176065 61 ntBASIC-3.55□□□□□ -2.98
Ccdc88bQ4QRL3 Gm26173-201ENSMUST00000158416 136 ntBASIC-3.57□□□□□ -2.98
Ccdc88bQ4QRL3 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-3.57□□□□□ -2.98
Ccdc88bQ4QRL3 Gm23515-201ENSMUST00000082829 107 ntBASIC-3.57□□□□□ -2.98
Ccdc88bQ4QRL3 Snord116l12-201ENSMUST00000179816 94 ntBASIC-3.58□□□□□ -2.98
Ccdc88bQ4QRL3 Gm45005-201ENSMUST00000206640 157 ntBASIC-3.58□□□□□ -2.98
Ccdc88bQ4QRL3 AC102369.1-201ENSMUST00000218415 373 ntBASIC-3.58□□□□□ -2.98
Ccdc88bQ4QRL3 Gm22458-201ENSMUST00000082576 107 ntBASIC-3.58□□□□□ -2.98
Ccdc88bQ4QRL3 Gm24492-201ENSMUST00000083798 107 ntBASIC-3.58□□□□□ -2.98
Ccdc88bQ4QRL3 Mir7670-201ENSMUST00000183689 69 ntBASIC-3.59□□□□□ -2.98
Ccdc88bQ4QRL3 Mir192-201ENSMUST00000083589 89 ntBASIC-3.6□□□□□ -2.99
Ccdc88bQ4QRL3 Gm24521-201ENSMUST00000083958 107 ntBASIC-3.6□□□□□ -2.99
Ccdc88bQ4QRL3 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-3.6□□□□□ -2.99
Ccdc88bQ4QRL3 Snord90-201ENSMUST00000104568 111 ntBASIC-3.6□□□□□ -2.99
Ccdc88bQ4QRL3 n-R5s87-201ENSMUST00000122752 116 ntBASIC-3.6□□□□□ -2.99
Ccdc88bQ4QRL3 Gm23080-201ENSMUST00000157846 103 ntBASIC-3.6□□□□□ -2.99
Ccdc88bQ4QRL3 AC109214.2-201ENSMUST00000220089 358 ntBASIC-3.6□□□□□ -2.99
Ccdc88bQ4QRL3 Gm22339-201ENSMUST00000157718 62 ntBASIC-3.61□□□□□ -2.99
Ccdc88bQ4QRL3 Gm26360-201ENSMUST00000158872 103 ntBASIC-3.61□□□□□ -2.99
Ccdc88bQ4QRL3 Gm27549-201ENSMUST00000183508 62 ntBASIC-3.61□□□□□ -2.99
Ccdc88bQ4QRL3 AC154552.1-201ENSMUST00000222969 202 ntBASIC-3.61□□□□□ -2.99
Ccdc88bQ4QRL3 Gm22186-201ENSMUST00000157822 122 ntBASIC-3.62□□□□□ -2.99
Ccdc88bQ4QRL3 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC-3.62□□□□□ -2.99
Ccdc88bQ4QRL3 Gm25680-201ENSMUST00000116917 126 ntBASIC-3.63□□□□□ -2.99
Ccdc88bQ4QRL3 Gm22635-201ENSMUST00000116962 126 ntBASIC-3.63□□□□□ -2.99
Ccdc88bQ4QRL3 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-3.63□□□□□ -2.99
Ccdc88bQ4QRL3 Gm23730-201ENSMUST00000083236 107 ntBASIC-3.63□□□□□ -2.99
Ccdc88bQ4QRL3 Gm23034-201ENSMUST00000158001 147 ntBASIC-3.64□□□□□ -2.99
Ccdc88bQ4QRL3 Gm45402-201ENSMUST00000211796 223 ntBASIC-3.64□□□□□ -2.99
Ccdc88bQ4QRL3 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-3.65□□□□□ -2.99
Ccdc88bQ4QRL3 Gm25995-201ENSMUST00000175396 142 ntBASIC-3.65□□□□□ -2.99
Ccdc88bQ4QRL3 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-3.65□□□□□ -2.99
Ccdc88bQ4QRL3 Mir539-201ENSMUST00000102109 74 ntBASIC-3.66□□□□□ -2.99
Ccdc88bQ4QRL3 Gm24801-201ENSMUST00000178503 105 ntBASIC-3.66□□□□□ -2.99
Ccdc88bQ4QRL3 AC132918.1-201ENSMUST00000227877 925 ntBASIC-3.66□□□□□ -2.99
Ccdc88bQ4QRL3 Gm24201-201ENSMUST00000082946 125 ntBASIC-3.67□□□□□ -3
Ccdc88bQ4QRL3 Gm28020-201ENSMUST00000157739 67 ntBASIC-3.67□□□□□ -3
Ccdc88bQ4QRL3 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC-3.68□□□□□ -3
Ccdc88bQ4QRL3 Gm26231-201ENSMUST00000175218 67 ntBASIC-3.68□□□□□ -3
Ccdc88bQ4QRL3 Mir465-201ENSMUST00000093563 74 ntBASIC-3.68□□□□□ -3
Ccdc88bQ4QRL3 Gm23772-201ENSMUST00000104433 102 ntBASIC-3.69□□□□□ -3
Ccdc88bQ4QRL3 Gm23260-201ENSMUST00000158317 172 ntBASIC-3.69□□□□□ -3
Retrieved 100 of 76,532 protein–RNA pairs in 160.8 ms