Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm25424-201ENSMUST00000157612 58 ntBASIC-3.42□□□□□ -2.96
Ccdc88bQ4QRL3 Gm45655-201ENSMUST00000211625 160 ntBASIC-3.42□□□□□ -2.96
Ccdc88bQ4QRL3 Gm22459-201ENSMUST00000082577 108 ntBASIC-3.42□□□□□ -2.96
Ccdc88bQ4QRL3 Gm25635-201ENSMUST00000082675 131 ntBASIC-3.42□□□□□ -2.96
Ccdc88bQ4QRL3 Gm23707-201ENSMUST00000104366 125 ntBASIC-3.43□□□□□ -2.96
Ccdc88bQ4QRL3 Gm14574-201ENSMUST00000120644 279 ntBASIC-3.43□□□□□ -2.96
Ccdc88bQ4QRL3 Gm29818-201ENSMUST00000218070 165 ntBASIC-3.43□□□□□ -2.96
Ccdc88bQ4QRL3 Gm24762-201ENSMUST00000083689 104 ntBASIC-3.43□□□□□ -2.96
Ccdc88bQ4QRL3 Gm23344-201ENSMUST00000083818 68 ntBASIC-3.43□□□□□ -2.96
Ccdc88bQ4QRL3 Gm22842-201ENSMUST00000157709 118 ntBASIC-3.44□□□□□ -2.96
Ccdc88bQ4QRL3 Gm28849-201ENSMUST00000188127 174 ntBASIC-3.44□□□□□ -2.96
Ccdc88bQ4QRL3 Gm25862-201ENSMUST00000158250 129 ntBASIC-3.45□□□□□ -2.96
Ccdc88bQ4QRL3 Gm24499-201ENSMUST00000158446 104 ntBASIC-3.45□□□□□ -2.96
Ccdc88bQ4QRL3 Gm25267-201ENSMUST00000158522 63 ntBASIC-3.45□□□□□ -2.96
Ccdc88bQ4QRL3 Gm23474-201ENSMUST00000158884 75 ntBASIC-3.45□□□□□ -2.96
Ccdc88bQ4QRL3 Gm27937-201ENSMUST00000183605 88 ntBASIC-3.45□□□□□ -2.96
Ccdc88bQ4QRL3 Gm21940-201ENSMUST00000204940 2278 ntBASIC-3.45□□□□□ -2.96
Ccdc88bQ4QRL3 Gm22834-201ENSMUST00000102021 79 ntBASIC-3.46□□□□□ -2.96
Ccdc88bQ4QRL3 Gm22708-201ENSMUST00000158987 103 ntBASIC-3.46□□□□□ -2.96
Ccdc88bQ4QRL3 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC-3.46□□□□□ -2.96
Ccdc88bQ4QRL3 Gm26287-201ENSMUST00000158887 81 ntBASIC-3.47□□□□□ -2.96
Ccdc88bQ4QRL3 Mir802-201ENSMUST00000103258 97 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 Gm23817-201ENSMUST00000158449 104 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 Gm25749-201ENSMUST00000175485 111 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 Gm24111-201ENSMUST00000175491 97 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 Gm23306-201ENSMUST00000179058 105 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 Gm27410-201ENSMUST00000183851 115 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 Gm43977-201ENSMUST00000203970 189 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 AC145736.2-201ENSMUST00000216305 365 ntBASIC-3.47□□□□□ -2.97
Ccdc88bQ4QRL3 Gm12584-201ENSMUST00000117109 1105 ntBASIC-3.48□□□□□ -2.97
Ccdc88bQ4QRL3 Mir2136-201ENSMUST00000158781 75 ntBASIC-3.48□□□□□ -2.97
Ccdc88bQ4QRL3 Gm22631-201ENSMUST00000179656 94 ntBASIC-3.48□□□□□ -2.97
Ccdc88bQ4QRL3 Gm28506-201ENSMUST00000189937 150 ntBASIC-3.48□□□□□ -2.97
Ccdc88bQ4QRL3 Mir3535-201ENSMUST00000197651 147 ntBASIC-3.48□□□□□ -2.97
Ccdc88bQ4QRL3 Gm25644-201ENSMUST00000083209 107 ntBASIC-3.49□□□□□ -2.97
Ccdc88bQ4QRL3 Gm22598-201ENSMUST00000157600 127 ntBASIC-3.5□□□□□ -2.97
Ccdc88bQ4QRL3 Gm25909-201ENSMUST00000157619 121 ntBASIC-3.5□□□□□ -2.97
Ccdc88bQ4QRL3 Snora15-201ENSMUST00000177461 131 ntBASIC-3.5□□□□□ -2.97
Ccdc88bQ4QRL3 AC124739.2-201ENSMUST00000222201 109 ntBASIC-3.5□□□□□ -2.97
Ccdc88bQ4QRL3 Gm23303-201ENSMUST00000082714 152 ntBASIC-3.51□□□□□ -2.97
Ccdc88bQ4QRL3 Mir201-201ENSMUST00000083470 66 ntBASIC-3.51□□□□□ -2.97
Ccdc88bQ4QRL3 Gm25937-201ENSMUST00000083912 107 ntBASIC-3.51□□□□□ -2.97
Ccdc88bQ4QRL3 Gm22946-201ENSMUST00000158558 82 ntBASIC-3.52□□□□□ -2.97
Ccdc88bQ4QRL3 Gm35558-203ENSMUST00000222264 204 ntBASIC-3.52□□□□□ -2.97
Ccdc88bQ4QRL3 Rny3-201ENSMUST00000083011 102 ntBASIC-3.52□□□□□ -2.97
Ccdc88bQ4QRL3 Gm24697-201ENSMUST00000083881 107 ntBASIC-3.52□□□□□ -2.97
Ccdc88bQ4QRL3 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-3.53□□□□□ -2.97
Ccdc88bQ4QRL3 Gm24960-201ENSMUST00000157923 90 ntBASIC-3.53□□□□□ -2.97
Ccdc88bQ4QRL3 Gm22259-201ENSMUST00000178926 107 ntBASIC-3.53□□□□□ -2.97
Ccdc88bQ4QRL3 Gm44489-201ENSMUST00000104619 97 ntBASIC-3.54□□□□□ -2.98
Ccdc88bQ4QRL3 Gm27995-201ENSMUST00000184402 100 ntBASIC-3.54□□□□□ -2.98
Ccdc88bQ4QRL3 Mir186-201ENSMUST00000083497 71 ntBASIC-3.54□□□□□ -2.98
Ccdc88bQ4QRL3 Gm22348-201ENSMUST00000178674 79 ntBASIC-3.54□□□□□ -2.98
Ccdc88bQ4QRL3 Gm24490-201ENSMUST00000083803 98 ntBASIC-3.54□□□□□ -2.98
Ccdc88bQ4QRL3 Mir669d-2-201ENSMUST00000116854 86 ntBASIC-3.55□□□□□ -2.98
Ccdc88bQ4QRL3 Gm14502-201ENSMUST00000118154 113 ntBASIC-3.55□□□□□ -2.98
Ccdc88bQ4QRL3 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-3.55□□□□□ -2.98
Ccdc88bQ4QRL3 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-3.55□□□□□ -2.98
Ccdc88bQ4QRL3 Mir5619-201ENSMUST00000176065 61 ntBASIC-3.55□□□□□ -2.98
Ccdc88bQ4QRL3 Gm26173-201ENSMUST00000158416 136 ntBASIC-3.57□□□□□ -2.98
Ccdc88bQ4QRL3 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-3.57□□□□□ -2.98
Ccdc88bQ4QRL3 Gm23515-201ENSMUST00000082829 107 ntBASIC-3.57□□□□□ -2.98
Ccdc88bQ4QRL3 Snord116l12-201ENSMUST00000179816 94 ntBASIC-3.58□□□□□ -2.98
Ccdc88bQ4QRL3 Gm45005-201ENSMUST00000206640 157 ntBASIC-3.58□□□□□ -2.98
Ccdc88bQ4QRL3 AC102369.1-201ENSMUST00000218415 373 ntBASIC-3.58□□□□□ -2.98
Ccdc88bQ4QRL3 Gm22458-201ENSMUST00000082576 107 ntBASIC-3.58□□□□□ -2.98
Ccdc88bQ4QRL3 Gm24492-201ENSMUST00000083798 107 ntBASIC-3.58□□□□□ -2.98
Ccdc88bQ4QRL3 Mir7670-201ENSMUST00000183689 69 ntBASIC-3.59□□□□□ -2.98
Ccdc88bQ4QRL3 Mir192-201ENSMUST00000083589 89 ntBASIC-3.6□□□□□ -2.99
Ccdc88bQ4QRL3 Gm24521-201ENSMUST00000083958 107 ntBASIC-3.6□□□□□ -2.99
Ccdc88bQ4QRL3 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-3.6□□□□□ -2.99
Ccdc88bQ4QRL3 Snord90-201ENSMUST00000104568 111 ntBASIC-3.6□□□□□ -2.99
Ccdc88bQ4QRL3 n-R5s87-201ENSMUST00000122752 116 ntBASIC-3.6□□□□□ -2.99
Ccdc88bQ4QRL3 Gm23080-201ENSMUST00000157846 103 ntBASIC-3.6□□□□□ -2.99
Ccdc88bQ4QRL3 AC109214.2-201ENSMUST00000220089 358 ntBASIC-3.6□□□□□ -2.99
Ccdc88bQ4QRL3 Gm22339-201ENSMUST00000157718 62 ntBASIC-3.61□□□□□ -2.99
Ccdc88bQ4QRL3 Gm26360-201ENSMUST00000158872 103 ntBASIC-3.61□□□□□ -2.99
Ccdc88bQ4QRL3 Gm27549-201ENSMUST00000183508 62 ntBASIC-3.61□□□□□ -2.99
Ccdc88bQ4QRL3 AC154552.1-201ENSMUST00000222969 202 ntBASIC-3.61□□□□□ -2.99
Ccdc88bQ4QRL3 Gm22186-201ENSMUST00000157822 122 ntBASIC-3.62□□□□□ -2.99
Ccdc88bQ4QRL3 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC-3.62□□□□□ -2.99
Ccdc88bQ4QRL3 Gm25680-201ENSMUST00000116917 126 ntBASIC-3.63□□□□□ -2.99
Ccdc88bQ4QRL3 Gm22635-201ENSMUST00000116962 126 ntBASIC-3.63□□□□□ -2.99
Ccdc88bQ4QRL3 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-3.63□□□□□ -2.99
Ccdc88bQ4QRL3 Gm23730-201ENSMUST00000083236 107 ntBASIC-3.63□□□□□ -2.99
Ccdc88bQ4QRL3 Gm23034-201ENSMUST00000158001 147 ntBASIC-3.64□□□□□ -2.99
Ccdc88bQ4QRL3 Gm45402-201ENSMUST00000211796 223 ntBASIC-3.64□□□□□ -2.99
Ccdc88bQ4QRL3 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-3.65□□□□□ -2.99
Ccdc88bQ4QRL3 Gm25995-201ENSMUST00000175396 142 ntBASIC-3.65□□□□□ -2.99
Ccdc88bQ4QRL3 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-3.65□□□□□ -2.99
Ccdc88bQ4QRL3 Mir539-201ENSMUST00000102109 74 ntBASIC-3.66□□□□□ -2.99
Ccdc88bQ4QRL3 Gm24801-201ENSMUST00000178503 105 ntBASIC-3.66□□□□□ -2.99
Ccdc88bQ4QRL3 AC132918.1-201ENSMUST00000227877 925 ntBASIC-3.66□□□□□ -2.99
Ccdc88bQ4QRL3 Gm24201-201ENSMUST00000082946 125 ntBASIC-3.67□□□□□ -3
Ccdc88bQ4QRL3 Gm28020-201ENSMUST00000157739 67 ntBASIC-3.67□□□□□ -3
Ccdc88bQ4QRL3 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC-3.68□□□□□ -3
Ccdc88bQ4QRL3 Gm26231-201ENSMUST00000175218 67 ntBASIC-3.68□□□□□ -3
Ccdc88bQ4QRL3 Mir465-201ENSMUST00000093563 74 ntBASIC-3.68□□□□□ -3
Ccdc88bQ4QRL3 Gm23772-201ENSMUST00000104433 102 ntBASIC-3.69□□□□□ -3
Ccdc88bQ4QRL3 Gm23260-201ENSMUST00000158317 172 ntBASIC-3.69□□□□□ -3
Retrieved 100 of 76,532 protein–RNA pairs in 137.2 ms