Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.01□□□□□ -2.41
Trim40Q3UWA4 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.01□□□□□ -2.41
Trim40Q3UWA4 Gm12086-201ENSMUST00000120863 228 ntBASIC-0.02□□□□□ -2.41
Trim40Q3UWA4 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.02□□□□□ -2.41
Trim40Q3UWA4 Gm25370-201ENSMUST00000158159 94 ntBASIC-0.02□□□□□ -2.41
Trim40Q3UWA4 Gm24947-201ENSMUST00000158334 110 ntBASIC-0.02□□□□□ -2.41
Trim40Q3UWA4 Gm25161-201ENSMUST00000158913 132 ntBASIC-0.02□□□□□ -2.41
Trim40Q3UWA4 Gm27980-201ENSMUST00000184094 169 ntBASIC-0.02□□□□□ -2.41
Trim40Q3UWA4 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.02□□□□□ -2.41
Trim40Q3UWA4 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.03□□□□□ -2.41
Trim40Q3UWA4 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.03□□□□□ -2.41
Trim40Q3UWA4 Gm22336-201ENSMUST00000157719 107 ntBASIC-0.04□□□□□ -2.42
Trim40Q3UWA4 Gm25978-201ENSMUST00000158698 90 ntBASIC-0.04□□□□□ -2.42
Trim40Q3UWA4 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.04□□□□□ -2.42
Trim40Q3UWA4 Mir7077-201ENSMUST00000183991 57 ntBASIC-0.04□□□□□ -2.42
Trim40Q3UWA4 Snord85-201ENSMUST00000083262 73 ntBASIC-0.04□□□□□ -2.42
Trim40Q3UWA4 Gm23578-201ENSMUST00000103943 104 ntBASIC-0.05□□□□□ -2.42
Trim40Q3UWA4 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.05□□□□□ -2.42
Trim40Q3UWA4 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-0.05□□□□□ -2.42
Trim40Q3UWA4 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.05□□□□□ -2.42
Trim40Q3UWA4 Mir6985-201ENSMUST00000184641 61 ntBASIC-0.05□□□□□ -2.42
Trim40Q3UWA4 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.05□□□□□ -2.42
Trim40Q3UWA4 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.05□□□□□ -2.42
Trim40Q3UWA4 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.05□□□□□ -2.42
Trim40Q3UWA4 Gm25425-201ENSMUST00000157611 96 ntBASIC-0.06□□□□□ -2.42
Trim40Q3UWA4 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.06□□□□□ -2.42
Trim40Q3UWA4 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.06□□□□□ -2.42
Trim40Q3UWA4 Gm43977-201ENSMUST00000203970 189 ntBASIC-0.06□□□□□ -2.42
Trim40Q3UWA4 Gm20734-201ENSMUST00000216939 193 ntBASIC-0.06□□□□□ -2.42
Trim40Q3UWA4 Mir29a-201ENSMUST00000083676 88 ntBASIC-0.06□□□□□ -2.42
Trim40Q3UWA4 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.07□□□□□ -2.42
Trim40Q3UWA4 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.07□□□□□ -2.42
Trim40Q3UWA4 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.07□□□□□ -2.42
Trim40Q3UWA4 Gm22031-201ENSMUST00000116945 126 ntBASIC-0.08□□□□□ -2.42
Trim40Q3UWA4 Gm23434-201ENSMUST00000157179 100 ntBASIC-0.08□□□□□ -2.42
Trim40Q3UWA4 Mir344-201ENSMUST00000083634 95 ntBASIC-0.08□□□□□ -2.42
Trim40Q3UWA4 Gm43885-201ENSMUST00000204928 2542 ntBASIC-0.08□□□□□ -2.42
Trim40Q3UWA4 Gm23126-201ENSMUST00000104260 134 ntBASIC-0.09□□□□□ -2.42
Trim40Q3UWA4 Gm25915-201ENSMUST00000104265 126 ntBASIC-0.09□□□□□ -2.42
Trim40Q3UWA4 Mir509-201ENSMUST00000196089 75 ntBASIC-0.09□□□□□ -2.42
Trim40Q3UWA4 Mir382-201ENSMUST00000083494 76 ntBASIC-0.09□□□□□ -2.42
Trim40Q3UWA4 Gm26478-201ENSMUST00000122611 133 ntBASIC-0.1□□□□□ -2.43
Trim40Q3UWA4 Mir363-201ENSMUST00000093598 75 ntBASIC-0.1□□□□□ -2.43
Trim40Q3UWA4 Mir1197-201ENSMUST00000117037 120 ntBASIC-0.11□□□□□ -2.43
Trim40Q3UWA4 Gm24379-201ENSMUST00000122695 86 ntBASIC-0.11□□□□□ -2.43
Trim40Q3UWA4 Gm25055-201ENSMUST00000157369 76 ntBASIC-0.11□□□□□ -2.43
Trim40Q3UWA4 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.11□□□□□ -2.43
Trim40Q3UWA4 AC157602.1-201ENSMUST00000197446 105 ntBASIC-0.11□□□□□ -2.43
Trim40Q3UWA4 Mir219b-201ENSMUST00000198317 65 ntBASIC-0.11□□□□□ -2.43
Trim40Q3UWA4 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.11□□□□□ -2.43
Trim40Q3UWA4 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
Trim40Q3UWA4 Gm24916-201ENSMUST00000157287 79 ntBASIC-0.12□□□□□ -2.43
Trim40Q3UWA4 Gm26438-201ENSMUST00000082593 107 ntBASIC-0.12□□□□□ -2.43
Trim40Q3UWA4 Gm24202-201ENSMUST00000082948 103 ntBASIC-0.12□□□□□ -2.43
Trim40Q3UWA4 Gm24983-201ENSMUST00000104457 69 ntBASIC-0.13□□□□□ -2.43
Trim40Q3UWA4 Gm22842-201ENSMUST00000157709 118 ntBASIC-0.13□□□□□ -2.43
Trim40Q3UWA4 Gm25889-201ENSMUST00000157775 107 ntBASIC-0.13□□□□□ -2.43
Trim40Q3UWA4 Gm22203-201ENSMUST00000158605 58 ntBASIC-0.13□□□□□ -2.43
Trim40Q3UWA4 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.13□□□□□ -2.43
Trim40Q3UWA4 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.14□□□□□ -2.43
Trim40Q3UWA4 Gm22542-201ENSMUST00000158166 95 ntBASIC-0.14□□□□□ -2.43
Trim40Q3UWA4 Gm25656-201ENSMUST00000158466 66 ntBASIC-0.14□□□□□ -2.43
Trim40Q3UWA4 Gm22431-201ENSMUST00000158545 107 ntBASIC-0.14□□□□□ -2.43
Trim40Q3UWA4 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC-0.14□□□□□ -2.43
Trim40Q3UWA4 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.14□□□□□ -2.43
Trim40Q3UWA4 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.14□□□□□ -2.43
Trim40Q3UWA4 Mir7-1-201ENSMUST00000083500 108 ntBASIC-0.14□□□□□ -2.43
Trim40Q3UWA4 mt-Tn-201ENSMUST00000082399 71 ntBASIC-0.15□□□□□ -2.43
Trim40Q3UWA4 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC-0.15□□□□□ -2.43
Trim40Q3UWA4 Gm25337-201ENSMUST00000083723 104 ntBASIC-0.15□□□□□ -2.43
Trim40Q3UWA4 Gm23350-201ENSMUST00000158429 103 ntBASIC-0.16□□□□□ -2.44
Trim40Q3UWA4 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.16□□□□□ -2.44
Trim40Q3UWA4 Gm22406-201ENSMUST00000174923 93 ntBASIC-0.16□□□□□ -2.44
Trim40Q3UWA4 Gm25993-201ENSMUST00000175391 80 ntBASIC-0.16□□□□□ -2.44
Trim40Q3UWA4 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.16□□□□□ -2.44
Trim40Q3UWA4 Mir369-201ENSMUST00000083627 79 ntBASIC-0.16□□□□□ -2.44
Trim40Q3UWA4 Gm23044-201ENSMUST00000157891 100 ntBASIC-0.17□□□□□ -2.44
Trim40Q3UWA4 Mir6237-201ENSMUST00000183808 91 ntBASIC-0.17□□□□□ -2.44
Trim40Q3UWA4 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.17□□□□□ -2.44
Trim40Q3UWA4 Gm26379-202ENSMUST00000200225 132 ntBASIC-0.17□□□□□ -2.44
Trim40Q3UWA4 Gm22720-201ENSMUST00000122710 87 ntBASIC-0.18□□□□□ -2.44
Trim40Q3UWA4 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.18□□□□□ -2.44
Trim40Q3UWA4 Gm24676-201ENSMUST00000158758 75 ntBASIC-0.18□□□□□ -2.44
Trim40Q3UWA4 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.18□□□□□ -2.44
Trim40Q3UWA4 AC158982.2-201ENSMUST00000226283 184 ntBASIC-0.18□□□□□ -2.44
Trim40Q3UWA4 Gm23678-201ENSMUST00000083157 107 ntBASIC-0.18□□□□□ -2.44
Trim40Q3UWA4 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.18□□□□□ -2.44
Trim40Q3UWA4 Mir200b-201ENSMUST00000083615 70 ntBASIC-0.18□□□□□ -2.44
Trim40Q3UWA4 Gm24342-201ENSMUST00000103907 104 ntBASIC-0.19□□□□□ -2.44
Trim40Q3UWA4 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.19□□□□□ -2.44
Trim40Q3UWA4 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.2□□□□□ -2.44
Trim40Q3UWA4 Snord67-201ENSMUST00000104033 111 ntBASIC-0.2□□□□□ -2.44
Trim40Q3UWA4 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.2□□□□□ -2.44
Trim40Q3UWA4 Gm24926-201ENSMUST00000178053 79 ntBASIC-0.2□□□□□ -2.44
Trim40Q3UWA4 Gm22632-201ENSMUST00000178266 79 ntBASIC-0.2□□□□□ -2.44
Trim40Q3UWA4 Gm24697-201ENSMUST00000083881 107 ntBASIC-0.2□□□□□ -2.44
Trim40Q3UWA4 Gm25646-201ENSMUST00000178527 79 ntBASIC-0.21□□□□□ -2.44
Trim40Q3UWA4 Gm25633-201ENSMUST00000178565 107 ntBASIC-0.21□□□□□ -2.44
Trim40Q3UWA4 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.21□□□□□ -2.44
Trim40Q3UWA4 Mir669h-201ENSMUST00000116944 125 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 146.1 ms