Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm24199-201ENSMUST00000157808 136 ntBASIC1.45□□□□□ -2.18
Ebf1Q07802 Gm24677-201ENSMUST00000158755 150 ntBASIC1.45□□□□□ -2.18
Ebf1Q07802 Gm24154-201ENSMUST00000175261 130 ntBASIC1.45□□□□□ -2.18
Ebf1Q07802 Gm25870-201ENSMUST00000179845 79 ntBASIC1.45□□□□□ -2.18
Ebf1Q07802 Gm27420-201ENSMUST00000183823 79 ntBASIC1.45□□□□□ -2.18
Ebf1Q07802 Mir7059-201ENSMUST00000184825 59 ntBASIC1.45□□□□□ -2.18
Ebf1Q07802 Gm12432-201ENSMUST00000119540 186 ntBASIC1.44□□□□□ -2.18
Ebf1Q07802 Gm23329-201ENSMUST00000157415 108 ntBASIC1.44□□□□□ -2.18
Ebf1Q07802 Gm23339-201ENSMUST00000158962 139 ntBASIC1.44□□□□□ -2.18
Ebf1Q07802 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Ebf1Q07802 Gm43944-201ENSMUST00000205220 120 ntBASIC1.44□□□□□ -2.18
Ebf1Q07802 Snord96a-201ENSMUST00000082791 81 ntBASIC1.44□□□□□ -2.18
Ebf1Q07802 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Ebf1Q07802 Mir653-201ENSMUST00000102402 85 ntBASIC1.43□□□□□ -2.18
Ebf1Q07802 Gm22030-201ENSMUST00000116942 63 ntBASIC1.43□□□□□ -2.18
Ebf1Q07802 Gm22067-201ENSMUST00000122790 107 ntBASIC1.43□□□□□ -2.18
Ebf1Q07802 Gm23114-201ENSMUST00000158478 117 ntBASIC1.43□□□□□ -2.18
Ebf1Q07802 Mir1933-201ENSMUST00000158930 88 ntBASIC1.43□□□□□ -2.18
Ebf1Q07802 Gm38295-201ENSMUST00000191951 151 ntBASIC1.43□□□□□ -2.18
Ebf1Q07802 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.43□□□□□ -2.18
Ebf1Q07802 Gm44488-201ENSMUST00000199467 119 ntBASIC1.43□□□□□ -2.18
Ebf1Q07802 Gm23293-201ENSMUST00000082552 104 ntBASIC1.43□□□□□ -2.18
Ebf1Q07802 Gm23301-201ENSMUST00000082713 65 ntBASIC1.43□□□□□ -2.18
Ebf1Q07802 Gm25170-201ENSMUST00000104191 129 ntBASIC1.42□□□□□ -2.18
Ebf1Q07802 Gm25417-201ENSMUST00000104212 131 ntBASIC1.42□□□□□ -2.18
Ebf1Q07802 Gm26301-201ENSMUST00000104813 95 ntBASIC1.42□□□□□ -2.18
Ebf1Q07802 Gm24868-201ENSMUST00000157265 136 ntBASIC1.42□□□□□ -2.18
Ebf1Q07802 Gm25056-201ENSMUST00000157372 62 ntBASIC1.42□□□□□ -2.18
Ebf1Q07802 Gm24077-201ENSMUST00000158183 136 ntBASIC1.42□□□□□ -2.18
Ebf1Q07802 Gm26712-201ENSMUST00000180813 217 ntBASIC1.42□□□□□ -2.18
Ebf1Q07802 Gm26207-201ENSMUST00000082909 104 ntBASIC1.42□□□□□ -2.18
Ebf1Q07802 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.42□□□□□ -2.18
Ebf1Q07802 Gm24271-201ENSMUST00000102327 111 ntBASIC1.41□□□□□ -2.18
Ebf1Q07802 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Ebf1Q07802 Gm24290-201ENSMUST00000157634 96 ntBASIC1.41□□□□□ -2.18
Ebf1Q07802 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.41□□□□□ -2.18
Ebf1Q07802 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.41□□□□□ -2.18
Ebf1Q07802 Gm22788-201ENSMUST00000157876 61 ntBASIC1.4□□□□□ -2.19
Ebf1Q07802 Gm25693-201ENSMUST00000175443 85 ntBASIC1.4□□□□□ -2.19
Ebf1Q07802 Mir1954-201ENSMUST00000175595 86 ntBASIC1.4□□□□□ -2.19
Ebf1Q07802 Gm24495-201ENSMUST00000178575 79 ntBASIC1.4□□□□□ -2.19
Ebf1Q07802 Gm22253-201ENSMUST00000179870 79 ntBASIC1.4□□□□□ -2.19
Ebf1Q07802 Gm44396-201ENSMUST00000199843 114 ntBASIC1.4□□□□□ -2.19
Ebf1Q07802 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.4□□□□□ -2.19
Ebf1Q07802 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Ebf1Q07802 Gm23130-201ENSMUST00000104252 74 ntBASIC1.39□□□□□ -2.19
Ebf1Q07802 Gm24262-201ENSMUST00000157431 144 ntBASIC1.39□□□□□ -2.19
Ebf1Q07802 Gm22541-201ENSMUST00000158165 127 ntBASIC1.39□□□□□ -2.19
Ebf1Q07802 Gm23410-201ENSMUST00000179967 107 ntBASIC1.39□□□□□ -2.19
Ebf1Q07802 Gm24202-201ENSMUST00000082948 103 ntBASIC1.39□□□□□ -2.19
Ebf1Q07802 Gm22505-201ENSMUST00000082956 108 ntBASIC1.39□□□□□ -2.19
Ebf1Q07802 Gm22363-201ENSMUST00000083100 108 ntBASIC1.39□□□□□ -2.19
Ebf1Q07802 Gm23814-201ENSMUST00000083230 102 ntBASIC1.39□□□□□ -2.19
Ebf1Q07802 Gm25541-201ENSMUST00000116888 126 ntBASIC1.38□□□□□ -2.19
Ebf1Q07802 Gm24064-201ENSMUST00000157486 106 ntBASIC1.38□□□□□ -2.19
Ebf1Q07802 Gm23221-201ENSMUST00000158118 93 ntBASIC1.38□□□□□ -2.19
Ebf1Q07802 Gm23291-201ENSMUST00000175611 78 ntBASIC1.38□□□□□ -2.19
Ebf1Q07802 Mir7052-201ENSMUST00000184821 65 ntBASIC1.38□□□□□ -2.19
Ebf1Q07802 Gm24252-201ENSMUST00000083700 132 ntBASIC1.38□□□□□ -2.19
Ebf1Q07802 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.38□□□□□ -2.19
Ebf1Q07802 Mir216b-201ENSMUST00000102363 86 ntBASIC1.37□□□□□ -2.19
Ebf1Q07802 Gm22780-201ENSMUST00000104084 132 ntBASIC1.37□□□□□ -2.19
Ebf1Q07802 Gm22466-201ENSMUST00000175278 69 ntBASIC1.37□□□□□ -2.19
Ebf1Q07802 Gm26224-201ENSMUST00000082506 80 ntBASIC1.37□□□□□ -2.19
Ebf1Q07802 Mir30a-201ENSMUST00000083471 71 ntBASIC1.37□□□□□ -2.19
Ebf1Q07802 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.36□□□□□ -2.19
Ebf1Q07802 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.36□□□□□ -2.19
Ebf1Q07802 Gm25416-201ENSMUST00000104221 107 ntBASIC1.36□□□□□ -2.19
Ebf1Q07802 Gm24988-201ENSMUST00000104460 121 ntBASIC1.36□□□□□ -2.19
Ebf1Q07802 Gm23328-201ENSMUST00000157418 132 ntBASIC1.36□□□□□ -2.19
Ebf1Q07802 Gm25936-201ENSMUST00000179952 114 ntBASIC1.36□□□□□ -2.19
Ebf1Q07802 Gm25622-201ENSMUST00000157217 104 ntBASIC1.35□□□□□ -2.19
Ebf1Q07802 Gm24808-201ENSMUST00000157993 118 ntBASIC1.35□□□□□ -2.19
Ebf1Q07802 Gm43907-201ENSMUST00000203128 117 ntBASIC1.35□□□□□ -2.19
Ebf1Q07802 Snord69-201ENSMUST00000104024 80 ntBASIC1.34□□□□□ -2.19
Ebf1Q07802 Gm23237-201ENSMUST00000104639 92 ntBASIC1.34□□□□□ -2.19
Ebf1Q07802 Gm11333-201ENSMUST00000119479 148 ntBASIC1.34□□□□□ -2.19
Ebf1Q07802 Gm22100-201ENSMUST00000157926 63 ntBASIC1.34□□□□□ -2.19
Ebf1Q07802 Gm26029-201ENSMUST00000158659 132 ntBASIC1.34□□□□□ -2.19
Ebf1Q07802 Mir7063-201ENSMUST00000184158 91 ntBASIC1.34□□□□□ -2.19
Ebf1Q07802 Gm38323-201ENSMUST00000192450 210 ntBASIC1.34□□□□□ -2.19
Ebf1Q07802 Gm23570-201ENSMUST00000083029 104 ntBASIC1.34□□□□□ -2.19
Ebf1Q07802 Gm25609-201ENSMUST00000104019 104 ntBASIC1.33□□□□□ -2.2
Ebf1Q07802 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.33□□□□□ -2.2
Ebf1Q07802 Snord13-201ENSMUST00000157627 104 ntBASIC1.33□□□□□ -2.2
Ebf1Q07802 Gm24549-201ENSMUST00000158647 139 ntBASIC1.33□□□□□ -2.2
Ebf1Q07802 Gm23636-201ENSMUST00000175070 95 ntBASIC1.33□□□□□ -2.2
Ebf1Q07802 Gm24624-201ENSMUST00000082617 164 ntBASIC1.33□□□□□ -2.2
Ebf1Q07802 Snora75-201ENSMUST00000082903 133 ntBASIC1.33□□□□□ -2.2
Ebf1Q07802 Gm23991-201ENSMUST00000117033 93 ntBASIC1.32□□□□□ -2.2
Ebf1Q07802 Mir1197-201ENSMUST00000117037 120 ntBASIC1.32□□□□□ -2.2
Ebf1Q07802 Gm25160-201ENSMUST00000158914 102 ntBASIC1.32□□□□□ -2.2
Ebf1Q07802 Gm27656-201ENSMUST00000185055 80 ntBASIC1.32□□□□□ -2.2
Ebf1Q07802 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Ebf1Q07802 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
Ebf1Q07802 Gm25991-201ENSMUST00000102439 99 ntBASIC1.31□□□□□ -2.2
Ebf1Q07802 Gm23203-201ENSMUST00000104374 107 ntBASIC1.31□□□□□ -2.2
Ebf1Q07802 Gm6985-201ENSMUST00000121255 271 ntBASIC1.31□□□□□ -2.2
Ebf1Q07802 Gm25366-201ENSMUST00000158845 124 ntBASIC1.31□□□□□ -2.2
Ebf1Q07802 Gm26499-201ENSMUST00000178544 79 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 177.1 ms