Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm26301-201ENSMUST00000104813 95 ntBASIC1.43□□□□□ -2.18
Col8a1Q00780 Gm25600-201ENSMUST00000158357 106 ntBASIC1.43□□□□□ -2.18
Col8a1Q00780 Gm25974-201ENSMUST00000158701 94 ntBASIC1.43□□□□□ -2.18
Col8a1Q00780 Gm26359-201ENSMUST00000158873 101 ntBASIC1.43□□□□□ -2.18
Col8a1Q00780 Gm22413-201ENSMUST00000175465 85 ntBASIC1.43□□□□□ -2.18
Col8a1Q00780 Mir3064-201ENSMUST00000175532 67 ntBASIC1.43□□□□□ -2.18
Col8a1Q00780 Gm37778-201ENSMUST00000191732 190 ntBASIC1.43□□□□□ -2.18
Col8a1Q00780 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.43□□□□□ -2.18
Col8a1Q00780 Gm22809-201ENSMUST00000082743 156 ntBASIC1.43□□□□□ -2.18
Col8a1Q00780 Snord14a-201ENSMUST00000082807 87 ntBASIC1.43□□□□□ -2.18
Col8a1Q00780 Gm25650-201ENSMUST00000083784 162 ntBASIC1.43□□□□□ -2.18
Col8a1Q00780 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
Col8a1Q00780 Mir873a-201ENSMUST00000104863 77 ntBASIC1.42□□□□□ -2.18
Col8a1Q00780 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.42□□□□□ -2.18
Col8a1Q00780 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.42□□□□□ -2.18
Col8a1Q00780 Gm23857-201ENSMUST00000158379 111 ntBASIC1.42□□□□□ -2.18
Col8a1Q00780 Gm22929-201ENSMUST00000175517 107 ntBASIC1.42□□□□□ -2.18
Col8a1Q00780 Gm42506-201ENSMUST00000202009 150 ntBASIC1.42□□□□□ -2.18
Col8a1Q00780 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.42□□□□□ -2.18
Col8a1Q00780 Gm24202-201ENSMUST00000082948 103 ntBASIC1.42□□□□□ -2.18
Col8a1Q00780 Gm25756-201ENSMUST00000103990 136 ntBASIC1.41□□□□□ -2.18
Col8a1Q00780 Snord71-201ENSMUST00000104361 85 ntBASIC1.41□□□□□ -2.18
Col8a1Q00780 Gm24915-201ENSMUST00000157288 78 ntBASIC1.41□□□□□ -2.18
Col8a1Q00780 Gm24547-201ENSMUST00000158649 149 ntBASIC1.41□□□□□ -2.18
Col8a1Q00780 Gm24222-201ENSMUST00000158834 93 ntBASIC1.41□□□□□ -2.18
Col8a1Q00780 Gm24154-201ENSMUST00000175261 130 ntBASIC1.41□□□□□ -2.18
Col8a1Q00780 Gm27656-201ENSMUST00000185055 80 ntBASIC1.41□□□□□ -2.18
Col8a1Q00780 Gm44948-201ENSMUST00000209050 149 ntBASIC1.41□□□□□ -2.18
Col8a1Q00780 Gm24208-201ENSMUST00000082783 135 ntBASIC1.41□□□□□ -2.18
Col8a1Q00780 Snord1a-201ENSMUST00000083160 74 ntBASIC1.41□□□□□ -2.18
Col8a1Q00780 Gm25991-201ENSMUST00000102439 99 ntBASIC1.4□□□□□ -2.19
Col8a1Q00780 Gm22603-201ENSMUST00000157603 96 ntBASIC1.4□□□□□ -2.19
Col8a1Q00780 Gm23340-201ENSMUST00000158955 123 ntBASIC1.4□□□□□ -2.19
Col8a1Q00780 Gm22801-201ENSMUST00000175624 84 ntBASIC1.4□□□□□ -2.19
Col8a1Q00780 Mir6985-201ENSMUST00000184641 61 ntBASIC1.4□□□□□ -2.19
Col8a1Q00780 Gm23170-201ENSMUST00000157158 106 ntBASIC1.39□□□□□ -2.19
Col8a1Q00780 Gm25552-201ENSMUST00000158081 91 ntBASIC1.39□□□□□ -2.19
Col8a1Q00780 Gm22386-201ENSMUST00000158192 129 ntBASIC1.39□□□□□ -2.19
Col8a1Q00780 Gm26029-201ENSMUST00000158659 132 ntBASIC1.39□□□□□ -2.19
Col8a1Q00780 Gm23291-201ENSMUST00000175611 78 ntBASIC1.39□□□□□ -2.19
Col8a1Q00780 Mir7675-201ENSMUST00000184262 58 ntBASIC1.39□□□□□ -2.19
Col8a1Q00780 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Col8a1Q00780 Mir468-201ENSMUST00000197332 78 ntBASIC1.39□□□□□ -2.19
Col8a1Q00780 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.39□□□□□ -2.19
Col8a1Q00780 Mir344-201ENSMUST00000083634 95 ntBASIC1.39□□□□□ -2.19
Col8a1Q00780 Gm6985-201ENSMUST00000121255 271 ntBASIC1.38□□□□□ -2.19
Col8a1Q00780 Gm24476-201ENSMUST00000157437 131 ntBASIC1.38□□□□□ -2.19
Col8a1Q00780 Gm24677-201ENSMUST00000158755 150 ntBASIC1.38□□□□□ -2.19
Col8a1Q00780 Gm24229-201ENSMUST00000158830 118 ntBASIC1.38□□□□□ -2.19
Col8a1Q00780 Mir3098-201ENSMUST00000175416 87 ntBASIC1.38□□□□□ -2.19
Col8a1Q00780 Gm36956-201ENSMUST00000193830 214 ntBASIC1.38□□□□□ -2.19
Col8a1Q00780 Gm25110-201ENSMUST00000116684 121 ntBASIC1.37□□□□□ -2.19
Col8a1Q00780 Gm25775-201ENSMUST00000116716 121 ntBASIC1.37□□□□□ -2.19
Col8a1Q00780 Gm24795-201ENSMUST00000116737 121 ntBASIC1.37□□□□□ -2.19
Col8a1Q00780 Gm25171-201ENSMUST00000116926 121 ntBASIC1.37□□□□□ -2.19
Col8a1Q00780 Gm23329-201ENSMUST00000157415 108 ntBASIC1.37□□□□□ -2.19
Col8a1Q00780 Gm23328-201ENSMUST00000157418 132 ntBASIC1.37□□□□□ -2.19
Col8a1Q00780 Gm23122-201ENSMUST00000157645 103 ntBASIC1.37□□□□□ -2.19
Col8a1Q00780 Gm26181-201ENSMUST00000157687 106 ntBASIC1.37□□□□□ -2.19
Col8a1Q00780 Gm26089-201ENSMUST00000157898 107 ntBASIC1.37□□□□□ -2.19
Col8a1Q00780 Gm22862-201ENSMUST00000178593 121 ntBASIC1.37□□□□□ -2.19
Col8a1Q00780 Gm27993-201ENSMUST00000184362 85 ntBASIC1.37□□□□□ -2.19
Col8a1Q00780 Gm28383-201ENSMUST00000187563 139 ntBASIC1.37□□□□□ -2.19
Col8a1Q00780 Mir709-201ENSMUST00000102190 88 ntBASIC1.36□□□□□ -2.19
Col8a1Q00780 Mir343-201ENSMUST00000102360 75 ntBASIC1.36□□□□□ -2.19
Col8a1Q00780 Mir216b-201ENSMUST00000102363 86 ntBASIC1.36□□□□□ -2.19
Col8a1Q00780 Gm11857-201ENSMUST00000119817 324 ntBASIC1.36□□□□□ -2.19
Col8a1Q00780 Gm22788-201ENSMUST00000157876 61 ntBASIC1.36□□□□□ -2.19
Col8a1Q00780 Gm25035-201ENSMUST00000175414 77 ntBASIC1.36□□□□□ -2.19
Col8a1Q00780 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Col8a1Q00780 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.36□□□□□ -2.19
Col8a1Q00780 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.35□□□□□ -2.19
Col8a1Q00780 Mir223-201ENSMUST00000102112 110 ntBASIC1.35□□□□□ -2.19
Col8a1Q00780 Gm22030-201ENSMUST00000116942 63 ntBASIC1.35□□□□□ -2.19
Col8a1Q00780 Gm25663-201ENSMUST00000157698 135 ntBASIC1.35□□□□□ -2.19
Col8a1Q00780 Gm23558-201ENSMUST00000157823 80 ntBASIC1.35□□□□□ -2.19
Col8a1Q00780 Gm25366-201ENSMUST00000158845 124 ntBASIC1.35□□□□□ -2.19
Col8a1Q00780 Gm24331-201ENSMUST00000175099 67 ntBASIC1.35□□□□□ -2.19
Col8a1Q00780 Gm25693-201ENSMUST00000175443 85 ntBASIC1.35□□□□□ -2.19
Col8a1Q00780 Gm23801-201ENSMUST00000175561 67 ntBASIC1.35□□□□□ -2.19
Col8a1Q00780 Gm24485-201ENSMUST00000178283 67 ntBASIC1.35□□□□□ -2.19
Col8a1Q00780 Gm27493-201ENSMUST00000184128 78 ntBASIC1.35□□□□□ -2.19
Col8a1Q00780 Gm44488-201ENSMUST00000199467 119 ntBASIC1.35□□□□□ -2.19
Col8a1Q00780 Mir126a-201ENSMUST00000083606 73 ntBASIC1.35□□□□□ -2.19
Col8a1Q00780 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Col8a1Q00780 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Col8a1Q00780 Gm24290-201ENSMUST00000157634 96 ntBASIC1.34□□□□□ -2.19
Col8a1Q00780 Gm26038-201ENSMUST00000158151 106 ntBASIC1.34□□□□□ -2.19
Col8a1Q00780 Mir1961-201ENSMUST00000158643 112 ntBASIC1.34□□□□□ -2.19
Col8a1Q00780 Gm43907-201ENSMUST00000203128 117 ntBASIC1.34□□□□□ -2.19
Col8a1Q00780 Gm24983-201ENSMUST00000104457 69 ntBASIC1.33□□□□□ -2.2
Col8a1Q00780 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.33□□□□□ -2.2
Col8a1Q00780 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.33□□□□□ -2.2
Col8a1Q00780 Snora75-201ENSMUST00000082903 133 ntBASIC1.33□□□□□ -2.2
Col8a1Q00780 Gm24134-201ENSMUST00000083361 71 ntBASIC1.33□□□□□ -2.2
Col8a1Q00780 Gm24288-201ENSMUST00000157630 144 ntBASIC1.32□□□□□ -2.2
Col8a1Q00780 Gm22100-201ENSMUST00000157926 63 ntBASIC1.32□□□□□ -2.2
Col8a1Q00780 Gm23856-201ENSMUST00000158380 99 ntBASIC1.32□□□□□ -2.2
Col8a1Q00780 Gm44458-201ENSMUST00000196594 143 ntBASIC1.32□□□□□ -2.2
Col8a1Q00780 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1.32□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 141.6 ms