Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm25749-201ENSMUST00000175485 111 ntBASIC-2.36□□□□□ -2.79
HttP42859 Gm23017-201ENSMUST00000177583 72 ntBASIC-2.36□□□□□ -2.79
HttP42859 Gm27798-201ENSMUST00000184989 71 ntBASIC-2.36□□□□□ -2.79
HttP42859 Gm23474-201ENSMUST00000158884 75 ntBASIC-2.37□□□□□ -2.79
HttP42859 Gm37763-201ENSMUST00000193445 120 ntBASIC-2.37□□□□□ -2.79
HttP42859 Gm44489-201ENSMUST00000104619 97 ntBASIC-2.37□□□□□ -2.79
HttP42859 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC-2.37□□□□□ -2.79
HttP42859 Gm22573-201ENSMUST00000082982 102 ntBASIC-2.37□□□□□ -2.79
HttP42859 Gm23567-201ENSMUST00000178005 107 ntBASIC-2.37□□□□□ -2.79
HttP42859 Mir29a-201ENSMUST00000083676 88 ntBASIC-2.37□□□□□ -2.79
HttP42859 Gm24897-201ENSMUST00000179033 107 ntBASIC-2.38□□□□□ -2.79
HttP42859 Mir367-201ENSMUST00000083479 75 ntBASIC-2.38□□□□□ -2.79
HttP42859 Gm25207-201ENSMUST00000093745 107 ntBASIC-2.38□□□□□ -2.79
HttP42859 Gm23320-201ENSMUST00000104462 127 ntBASIC-2.38□□□□□ -2.79
HttP42859 Gm25440-201ENSMUST00000158279 154 ntBASIC-2.38□□□□□ -2.79
HttP42859 Traj61-201ENSMUST00000165025 72 ntBASIC-2.38□□□□□ -2.79
HttP42859 Gm25450-201ENSMUST00000179144 107 ntBASIC-2.38□□□□□ -2.79
HttP42859 Gm23344-201ENSMUST00000083818 68 ntBASIC-2.38□□□□□ -2.79
HttP42859 Gm22818-201ENSMUST00000157446 104 ntBASIC-2.39□□□□□ -2.79
HttP42859 Gm22598-201ENSMUST00000157600 127 ntBASIC-2.39□□□□□ -2.79
HttP42859 Gm25267-201ENSMUST00000158522 63 ntBASIC-2.39□□□□□ -2.79
HttP42859 Gm44858-201ENSMUST00000207360 154 ntBASIC-2.39□□□□□ -2.79
HttP42859 Gm12584-201ENSMUST00000117109 1105 ntBASIC-2.39□□□□□ -2.79
HttP42859 Gm44142-201ENSMUST00000203358 311 ntBASIC-2.39□□□□□ -2.79
HttP42859 Gm44726-201ENSMUST00000203427 217 ntBASIC-2.39□□□□□ -2.79
HttP42859 Gm23093-201ENSMUST00000083450 102 ntBASIC-2.39□□□□□ -2.79
HttP42859 Mir201-201ENSMUST00000083470 66 ntBASIC-2.39□□□□□ -2.79
HttP42859 Mir154-201ENSMUST00000083514 66 ntBASIC-2.39□□□□□ -2.79
HttP42859 Gm27263-201ENSMUST00000184760 76 ntBASIC-2.4□□□□□ -2.79
HttP42859 Gm28506-201ENSMUST00000189937 150 ntBASIC-2.4□□□□□ -2.79
HttP42859 Gm24070-201ENSMUST00000104519 130 ntBASIC-2.4□□□□□ -2.79
HttP42859 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.4□□□□□ -2.79
HttP42859 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-2.4□□□□□ -2.79
HttP42859 Gm25229-201ENSMUST00000178587 79 ntBASIC-2.4□□□□□ -2.79
HttP42859 AC192091.2-201ENSMUST00000217869 117 ntBASIC-2.4□□□□□ -2.79
HttP42859 Gm9973-202ENSMUST00000220926 166 ntBASIC-2.4□□□□□ -2.79
HttP42859 Gm25634-201ENSMUST00000082667 105 ntBASIC-2.41□□□□□ -2.79
HttP42859 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.41□□□□□ -2.8
HttP42859 Gm22631-201ENSMUST00000179656 94 ntBASIC-2.41□□□□□ -2.8
HttP42859 Gm25635-201ENSMUST00000082675 131 ntBASIC-2.41□□□□□ -2.8
HttP42859 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC-2.42□□□□□ -2.8
HttP42859 Gm26495-201ENSMUST00000083152 137 ntBASIC-2.42□□□□□ -2.8
HttP42859 Gm24499-201ENSMUST00000158446 104 ntBASIC-2.42□□□□□ -2.8
HttP42859 Gm25812-201ENSMUST00000082751 103 ntBASIC-2.42□□□□□ -2.8
HttP42859 Gm23987-201ENSMUST00000117039 129 ntBASIC-2.43□□□□□ -2.8
HttP42859 Gm22834-201ENSMUST00000102021 79 ntBASIC-2.44□□□□□ -2.8
HttP42859 Gm23143-201ENSMUST00000180137 116 ntBASIC-2.44□□□□□ -2.8
HttP42859 Gm22572-201ENSMUST00000082985 105 ntBASIC-2.44□□□□□ -2.8
HttP42859 Gm22148-201ENSMUST00000104445 107 ntBASIC-2.44□□□□□ -2.8
HttP42859 Gm22165-201ENSMUST00000158414 103 ntBASIC-2.44□□□□□ -2.8
HttP42859 Gm23303-201ENSMUST00000082714 152 ntBASIC-2.44□□□□□ -2.8
HttP42859 Gm11835-201ENSMUST00000120635 663 ntBASIC-2.45□□□□□ -2.8
HttP42859 Gm23986-201ENSMUST00000157144 63 ntBASIC-2.45□□□□□ -2.8
HttP42859 Gm27919-201ENSMUST00000185163 107 ntBASIC-2.45□□□□□ -2.8
HttP42859 Gm26160-201ENSMUST00000158965 63 ntBASIC-2.45□□□□□ -2.8
HttP42859 Gm45655-201ENSMUST00000211625 160 ntBASIC-2.46□□□□□ -2.8
HttP42859 Rny3-201ENSMUST00000083011 102 ntBASIC-2.46□□□□□ -2.8
HttP42859 Gm22313-201ENSMUST00000158008 129 ntBASIC-2.46□□□□□ -2.8
HttP42859 AC109214.2-201ENSMUST00000220089 358 ntBASIC-2.46□□□□□ -2.8
HttP42859 Gm27410-201ENSMUST00000183851 115 ntBASIC-2.46□□□□□ -2.8
HttP42859 Gm26056-201ENSMUST00000083043 104 ntBASIC-2.46□□□□□ -2.8
HttP42859 Gm12013-201ENSMUST00000121971 155 ntBASIC-2.47□□□□□ -2.8
HttP42859 Gm28849-201ENSMUST00000188127 174 ntBASIC-2.47□□□□□ -2.8
HttP42859 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC-2.47□□□□□ -2.8
HttP42859 Mir541-201ENSMUST00000102097 90 ntBASIC-2.47□□□□□ -2.81
HttP42859 Gm24960-201ENSMUST00000157923 90 ntBASIC-2.47□□□□□ -2.81
HttP42859 Gm25862-201ENSMUST00000158250 129 ntBASIC-2.47□□□□□ -2.81
HttP42859 AC145736.2-201ENSMUST00000216305 365 ntBASIC-2.47□□□□□ -2.81
HttP42859 Gm29818-201ENSMUST00000218070 165 ntBASIC-2.47□□□□□ -2.81
HttP42859 mt-Tn-201ENSMUST00000082399 71 ntBASIC-2.47□□□□□ -2.81
HttP42859 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-2.48□□□□□ -2.81
HttP42859 Gm25995-201ENSMUST00000175396 142 ntBASIC-2.48□□□□□ -2.81
HttP42859 Gm45402-201ENSMUST00000211796 223 ntBASIC-2.48□□□□□ -2.81
HttP42859 Snora2b-201ENSMUST00000084005 137 ntBASIC-2.48□□□□□ -2.81
HttP42859 Gm24683-201ENSMUST00000104840 88 ntBASIC-2.48□□□□□ -2.81
HttP42859 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-2.48□□□□□ -2.81
HttP42859 Mir3535-201ENSMUST00000197651 147 ntBASIC-2.48□□□□□ -2.81
HttP42859 Gm22946-201ENSMUST00000158558 82 ntBASIC-2.49□□□□□ -2.81
HttP42859 Gm35558-203ENSMUST00000222264 204 ntBASIC-2.49□□□□□ -2.81
HttP42859 Mir802-201ENSMUST00000103258 97 ntBASIC-2.49□□□□□ -2.81
HttP42859 Gm22790-201ENSMUST00000157229 129 ntBASIC-2.49□□□□□ -2.81
HttP42859 Gm26287-201ENSMUST00000158887 81 ntBASIC-2.49□□□□□ -2.81
HttP42859 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-2.5□□□□□ -2.81
HttP42859 Gm27934-201ENSMUST00000158795 63 ntBASIC-2.51□□□□□ -2.81
HttP42859 Gm23859-201ENSMUST00000158383 64 ntBASIC-2.51□□□□□ -2.81
HttP42859 Gm38333-201ENSMUST00000193608 604 ntBASIC-2.51□□□□□ -2.81
HttP42859 AC159896.1-201ENSMUST00000215264 215 ntBASIC-2.51□□□□□ -2.81
HttP42859 Gm25859-201ENSMUST00000083710 91 ntBASIC-2.51□□□□□ -2.81
HttP42859 Gm27549-201ENSMUST00000183508 62 ntBASIC-2.51□□□□□ -2.81
HttP42859 Gm45005-201ENSMUST00000206640 157 ntBASIC-2.51□□□□□ -2.81
HttP42859 Gm26360-201ENSMUST00000158872 103 ntBASIC-2.52□□□□□ -2.81
HttP42859 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-2.52□□□□□ -2.81
HttP42859 Mir192-201ENSMUST00000083589 89 ntBASIC-2.52□□□□□ -2.81
HttP42859 Gm25909-201ENSMUST00000157619 121 ntBASIC-2.52□□□□□ -2.81
HttP42859 Gm37646-201ENSMUST00000191756 111 ntBASIC-2.52□□□□□ -2.81
HttP42859 Gm28020-201ENSMUST00000157739 67 ntBASIC-2.53□□□□□ -2.81
HttP42859 Gm24097-201ENSMUST00000178720 107 ntBASIC-2.53□□□□□ -2.81
HttP42859 Mir186-201ENSMUST00000083497 71 ntBASIC-2.53□□□□□ -2.81
HttP42859 Gm24697-201ENSMUST00000083881 107 ntBASIC-2.53□□□□□ -2.81
HttP42859 Gm22336-201ENSMUST00000157719 107 ntBASIC-2.53□□□□□ -2.81
Retrieved 100 of 76,532 protein–RNA pairs in 138 ms