Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm23570-201ENSMUST00000083029 104 ntBASIC1.74□□□□□ -2.13
RaraP11416 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.74□□□□□ -2.13
RaraP11416 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
RaraP11416 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
RaraP11416 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.73□□□□□ -2.13
RaraP11416 Gm23376-201ENSMUST00000082938 160 ntBASIC1.73□□□□□ -2.13
RaraP11416 Gm25832-201ENSMUST00000104140 130 ntBASIC1.72□□□□□ -2.13
RaraP11416 Gm22082-201ENSMUST00000157587 161 ntBASIC1.72□□□□□ -2.13
RaraP11416 Gm26089-201ENSMUST00000157898 107 ntBASIC1.72□□□□□ -2.13
RaraP11416 Gm26029-201ENSMUST00000158659 132 ntBASIC1.72□□□□□ -2.13
RaraP11416 Gm25693-201ENSMUST00000175443 85 ntBASIC1.72□□□□□ -2.13
RaraP11416 Mir6240-201ENSMUST00000184281 117 ntBASIC1.72□□□□□ -2.13
RaraP11416 Mir6352-201ENSMUST00000184495 116 ntBASIC1.72□□□□□ -2.13
RaraP11416 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.72□□□□□ -2.13
RaraP11416 Gm24208-201ENSMUST00000082783 135 ntBASIC1.72□□□□□ -2.13
RaraP11416 Mir216b-201ENSMUST00000102363 86 ntBASIC1.71□□□□□ -2.14
RaraP11416 Snord71-201ENSMUST00000104361 85 ntBASIC1.71□□□□□ -2.14
RaraP11416 Gm23203-201ENSMUST00000104374 107 ntBASIC1.71□□□□□ -2.14
RaraP11416 Gm15115-201ENSMUST00000121145 264 ntBASIC1.71□□□□□ -2.14
RaraP11416 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RaraP11416 Gm25160-201ENSMUST00000158914 102 ntBASIC1.71□□□□□ -2.14
RaraP11416 Gm23339-201ENSMUST00000158962 139 ntBASIC1.71□□□□□ -2.14
RaraP11416 Gm25870-201ENSMUST00000179845 79 ntBASIC1.71□□□□□ -2.14
RaraP11416 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.71□□□□□ -2.14
RaraP11416 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.7□□□□□ -2.14
RaraP11416 Gm22030-201ENSMUST00000116942 63 ntBASIC1.7□□□□□ -2.14
RaraP11416 Gm24290-201ENSMUST00000157634 96 ntBASIC1.7□□□□□ -2.14
RaraP11416 Gm23114-201ENSMUST00000158478 117 ntBASIC1.7□□□□□ -2.14
RaraP11416 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RaraP11416 Mir1933-201ENSMUST00000158930 88 ntBASIC1.69□□□□□ -2.14
RaraP11416 Gm23340-201ENSMUST00000158955 123 ntBASIC1.69□□□□□ -2.14
RaraP11416 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.69□□□□□ -2.14
RaraP11416 Snord96a-201ENSMUST00000082791 81 ntBASIC1.69□□□□□ -2.14
RaraP11416 Mir324-201ENSMUST00000083600 89 ntBASIC1.69□□□□□ -2.14
RaraP11416 Gm25964-201ENSMUST00000157171 97 ntBASIC1.68□□□□□ -2.14
RaraP11416 Gm22095-201ENSMUST00000158984 150 ntBASIC1.68□□□□□ -2.14
RaraP11416 Gm23291-201ENSMUST00000175611 78 ntBASIC1.68□□□□□ -2.14
RaraP11416 Gm26499-201ENSMUST00000178544 79 ntBASIC1.68□□□□□ -2.14
RaraP11416 Gm26096-201ENSMUST00000179084 79 ntBASIC1.68□□□□□ -2.14
RaraP11416 Gm23130-201ENSMUST00000104252 74 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm23708-201ENSMUST00000104367 123 ntBASIC1.67□□□□□ -2.14
RaraP11416 Mir873a-201ENSMUST00000104863 77 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm25622-201ENSMUST00000157217 104 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm22788-201ENSMUST00000157876 61 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm25936-201ENSMUST00000179952 114 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm27894-201ENSMUST00000184177 92 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm18433-201ENSMUST00000192747 197 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm20305-201ENSMUST00000193226 177 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm43944-201ENSMUST00000205220 120 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm24202-201ENSMUST00000082948 103 ntBASIC1.67□□□□□ -2.14
RaraP11416 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
RaraP11416 Gm22761-201ENSMUST00000102278 96 ntBASIC1.66□□□□□ -2.14
RaraP11416 Gm42506-201ENSMUST00000202009 150 ntBASIC1.66□□□□□ -2.14
RaraP11416 Gm45754-201ENSMUST00000212380 279 ntBASIC1.66□□□□□ -2.14
RaraP11416 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
RaraP11416 Mir1197-201ENSMUST00000117037 120 ntBASIC1.65□□□□□ -2.15
RaraP11416 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.64□□□□□ -2.15
RaraP11416 Gm23826-201ENSMUST00000157394 119 ntBASIC1.64□□□□□ -2.15
RaraP11416 Mir7665-201ENSMUST00000184907 63 ntBASIC1.64□□□□□ -2.15
RaraP11416 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.64□□□□□ -2.15
RaraP11416 Gm25541-201ENSMUST00000116888 126 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm26274-201ENSMUST00000157103 321 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm24262-201ENSMUST00000157431 144 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm27420-201ENSMUST00000183823 79 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm27656-201ENSMUST00000185055 80 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm43907-201ENSMUST00000203128 117 ntBASIC1.63□□□□□ -2.15
RaraP11416 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm6293-201ENSMUST00000050339 195 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm23301-201ENSMUST00000082713 65 ntBASIC1.63□□□□□ -2.15
RaraP11416 Mir320-201ENSMUST00000083594 82 ntBASIC1.63□□□□□ -2.15
RaraP11416 Mir148b-201ENSMUST00000083626 97 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm25847-201ENSMUST00000116793 96 ntBASIC1.62□□□□□ -2.15
RaraP11416 Gm25366-201ENSMUST00000158845 124 ntBASIC1.62□□□□□ -2.15
RaraP11416 Gm25950-201ENSMUST00000175331 100 ntBASIC1.62□□□□□ -2.15
RaraP11416 Gm27265-201ENSMUST00000183559 77 ntBASIC1.62□□□□□ -2.15
RaraP11416 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.62□□□□□ -2.15
RaraP11416 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
RaraP11416 Gm25609-201ENSMUST00000104019 104 ntBASIC1.61□□□□□ -2.15
RaraP11416 Gm25619-201ENSMUST00000122621 104 ntBASIC1.61□□□□□ -2.15
RaraP11416 Gm22541-201ENSMUST00000158165 127 ntBASIC1.61□□□□□ -2.15
RaraP11416 Gm26359-201ENSMUST00000158873 101 ntBASIC1.61□□□□□ -2.15
RaraP11416 Gm22466-201ENSMUST00000175278 69 ntBASIC1.61□□□□□ -2.15
RaraP11416 Gm23306-201ENSMUST00000179058 105 ntBASIC1.61□□□□□ -2.15
RaraP11416 Mir7052-201ENSMUST00000184821 65 ntBASIC1.61□□□□□ -2.15
RaraP11416 Gm44962-201ENSMUST00000206460 279 ntBASIC1.61□□□□□ -2.15
RaraP11416 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
RaraP11416 Gm22786-201ENSMUST00000104086 122 ntBASIC1.6□□□□□ -2.15
RaraP11416 Gm26301-201ENSMUST00000104813 95 ntBASIC1.6□□□□□ -2.15
RaraP11416 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.6□□□□□ -2.15
RaraP11416 Gm23558-201ENSMUST00000157823 80 ntBASIC1.6□□□□□ -2.15
RaraP11416 Gm23221-201ENSMUST00000158118 93 ntBASIC1.6□□□□□ -2.15
RaraP11416 Gm25354-201ENSMUST00000179110 105 ntBASIC1.6□□□□□ -2.15
RaraP11416 Gm44458-201ENSMUST00000196594 143 ntBASIC1.6□□□□□ -2.15
RaraP11416 Gm26224-201ENSMUST00000082506 80 ntBASIC1.6□□□□□ -2.15
RaraP11416 Snora75-201ENSMUST00000082903 133 ntBASIC1.6□□□□□ -2.15
RaraP11416 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
RaraP11416 Mir653-201ENSMUST00000102402 85 ntBASIC1.59□□□□□ -2.15
RaraP11416 Gm25991-201ENSMUST00000102439 99 ntBASIC1.59□□□□□ -2.15
RaraP11416 Snord69-201ENSMUST00000104024 80 ntBASIC1.59□□□□□ -2.15
RaraP11416 Gm24983-201ENSMUST00000104457 69 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 186.5 ms