Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm25652-201ENSMUST00000083780 103 ntBASIC1.44□□□□□ -2.18
Hoxd4P10628 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.43□□□□□ -2.18
Hoxd4P10628 Mir223-201ENSMUST00000102112 110 ntBASIC1.43□□□□□ -2.18
Hoxd4P10628 Mir216b-201ENSMUST00000102363 86 ntBASIC1.43□□□□□ -2.18
Hoxd4P10628 Gm25183-201ENSMUST00000157752 106 ntBASIC1.43□□□□□ -2.18
Hoxd4P10628 Gm24638-201ENSMUST00000179807 132 ntBASIC1.43□□□□□ -2.18
Hoxd4P10628 Gm27549-201ENSMUST00000183508 62 ntBASIC1.43□□□□□ -2.18
Hoxd4P10628 Gm44948-201ENSMUST00000209050 149 ntBASIC1.43□□□□□ -2.18
Hoxd4P10628 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.43□□□□□ -2.18
Hoxd4P10628 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.43□□□□□ -2.18
Hoxd4P10628 Gm25650-201ENSMUST00000083784 162 ntBASIC1.43□□□□□ -2.18
Hoxd4P10628 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Hoxd4P10628 Gm27450-201ENSMUST00000104632 90 ntBASIC1.42□□□□□ -2.18
Hoxd4P10628 Gm26257-201ENSMUST00000122500 107 ntBASIC1.42□□□□□ -2.18
Hoxd4P10628 Gm22203-201ENSMUST00000158605 58 ntBASIC1.42□□□□□ -2.18
Hoxd4P10628 Gm25366-201ENSMUST00000158845 124 ntBASIC1.42□□□□□ -2.18
Hoxd4P10628 Gm24154-201ENSMUST00000175261 130 ntBASIC1.42□□□□□ -2.18
Hoxd4P10628 Gm23649-201ENSMUST00000179007 107 ntBASIC1.42□□□□□ -2.18
Hoxd4P10628 Mir3087-201ENSMUST00000199405 56 ntBASIC1.42□□□□□ -2.18
Hoxd4P10628 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Hoxd4P10628 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Hoxd4P10628 Mir544-201ENSMUST00000103813 78 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 Gm24983-201ENSMUST00000104457 69 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.41□□□□□ -2.18
Hoxd4P10628 Gm25110-201ENSMUST00000116684 121 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 Gm25775-201ENSMUST00000116716 121 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 Gm24795-201ENSMUST00000116737 121 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 Gm25171-201ENSMUST00000116926 121 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 Gm22039-201ENSMUST00000157278 132 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 Gm24476-201ENSMUST00000157437 131 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 Gm24677-201ENSMUST00000158755 150 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 Gm25958-201ENSMUST00000175114 71 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 Gm22862-201ENSMUST00000178593 121 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 Mir7679-201ENSMUST00000183379 63 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 Mir468-201ENSMUST00000197332 78 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 Gm24201-201ENSMUST00000082946 125 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.41□□□□□ -2.18
Hoxd4P10628 Gm22406-201ENSMUST00000174923 93 ntBASIC1.4□□□□□ -2.19
Hoxd4P10628 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.4□□□□□ -2.19
Hoxd4P10628 Gm22801-201ENSMUST00000175624 84 ntBASIC1.4□□□□□ -2.19
Hoxd4P10628 Gm44488-201ENSMUST00000199467 119 ntBASIC1.4□□□□□ -2.19
Hoxd4P10628 Gm43907-201ENSMUST00000203128 117 ntBASIC1.4□□□□□ -2.19
Hoxd4P10628 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.39□□□□□ -2.19
Hoxd4P10628 Gm23672-201ENSMUST00000157471 107 ntBASIC1.39□□□□□ -2.19
Hoxd4P10628 Gm25423-201ENSMUST00000157609 107 ntBASIC1.39□□□□□ -2.19
Hoxd4P10628 Gm22788-201ENSMUST00000157876 61 ntBASIC1.39□□□□□ -2.19
Hoxd4P10628 Gm25035-201ENSMUST00000175414 77 ntBASIC1.39□□□□□ -2.19
Hoxd4P10628 Gm25693-201ENSMUST00000175443 85 ntBASIC1.39□□□□□ -2.19
Hoxd4P10628 Gm36956-201ENSMUST00000193830 214 ntBASIC1.39□□□□□ -2.19
Hoxd4P10628 Gm24927-201ENSMUST00000083397 107 ntBASIC1.39□□□□□ -2.19
Hoxd4P10628 Gm22030-201ENSMUST00000116942 63 ntBASIC1.38□□□□□ -2.19
Hoxd4P10628 Gm25279-201ENSMUST00000122608 133 ntBASIC1.38□□□□□ -2.19
Hoxd4P10628 Gm24895-201ENSMUST00000122742 74 ntBASIC1.38□□□□□ -2.19
Hoxd4P10628 Gm24290-201ENSMUST00000157634 96 ntBASIC1.38□□□□□ -2.19
Hoxd4P10628 Gm26089-201ENSMUST00000157898 107 ntBASIC1.38□□□□□ -2.19
Hoxd4P10628 Gm23221-201ENSMUST00000158118 93 ntBASIC1.38□□□□□ -2.19
Hoxd4P10628 Snora75-201ENSMUST00000082903 133 ntBASIC1.38□□□□□ -2.19
Hoxd4P10628 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.37□□□□□ -2.19
Hoxd4P10628 Gm24725-201ENSMUST00000158229 125 ntBASIC1.37□□□□□ -2.19
Hoxd4P10628 Gm24229-201ENSMUST00000158830 118 ntBASIC1.37□□□□□ -2.19
Hoxd4P10628 Gm26139-201ENSMUST00000180098 107 ntBASIC1.37□□□□□ -2.19
Hoxd4P10628 Gm28383-201ENSMUST00000187563 139 ntBASIC1.37□□□□□ -2.19
Hoxd4P10628 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.37□□□□□ -2.19
Hoxd4P10628 Gm25759-201ENSMUST00000103988 129 ntBASIC1.36□□□□□ -2.19
Hoxd4P10628 Gm26181-201ENSMUST00000157687 106 ntBASIC1.36□□□□□ -2.19
Hoxd4P10628 Gm24073-201ENSMUST00000158177 106 ntBASIC1.36□□□□□ -2.19
Hoxd4P10628 Gm23072-201ENSMUST00000158243 123 ntBASIC1.36□□□□□ -2.19
Hoxd4P10628 Gm25328-201ENSMUST00000175013 107 ntBASIC1.36□□□□□ -2.19
Hoxd4P10628 Gm22761-201ENSMUST00000102278 96 ntBASIC1.35□□□□□ -2.19
Hoxd4P10628 Gm15115-201ENSMUST00000121145 264 ntBASIC1.35□□□□□ -2.19
Hoxd4P10628 Gm22929-201ENSMUST00000175517 107 ntBASIC1.35□□□□□ -2.19
Hoxd4P10628 Mir7675-201ENSMUST00000184262 58 ntBASIC1.35□□□□□ -2.19
Hoxd4P10628 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.35□□□□□ -2.19
Hoxd4P10628 Snord14a-201ENSMUST00000082807 87 ntBASIC1.35□□□□□ -2.19
Hoxd4P10628 Mir148b-201ENSMUST00000083626 97 ntBASIC1.35□□□□□ -2.19
Hoxd4P10628 Mir15b-201ENSMUST00000083646 64 ntBASIC1.35□□□□□ -2.19
Hoxd4P10628 Gm22786-201ENSMUST00000104086 122 ntBASIC1.34□□□□□ -2.19
Hoxd4P10628 Gm25832-201ENSMUST00000104140 130 ntBASIC1.34□□□□□ -2.19
Hoxd4P10628 Snord13-201ENSMUST00000157627 104 ntBASIC1.34□□□□□ -2.19
Hoxd4P10628 Gm25663-201ENSMUST00000157698 135 ntBASIC1.34□□□□□ -2.19
Hoxd4P10628 Gm27993-201ENSMUST00000184362 85 ntBASIC1.34□□□□□ -2.19
Hoxd4P10628 Snord1a-201ENSMUST00000083160 74 ntBASIC1.34□□□□□ -2.19
Hoxd4P10628 Mir876-201ENSMUST00000104659 81 ntBASIC1.33□□□□□ -2.2
Hoxd4P10628 Mir3108-201ENSMUST00000175500 79 ntBASIC1.33□□□□□ -2.2
Hoxd4P10628 Gm23419-201ENSMUST00000175523 84 ntBASIC1.33□□□□□ -2.2
Hoxd4P10628 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Hoxd4P10628 Gm25186-201ENSMUST00000083909 108 ntBASIC1.33□□□□□ -2.2
Hoxd4P10628 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Hoxd4P10628 Mir487b-201ENSMUST00000102265 82 ntBASIC1.32□□□□□ -2.2
Hoxd4P10628 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Hoxd4P10628 Gm24580-201ENSMUST00000103965 131 ntBASIC1.32□□□□□ -2.2
Hoxd4P10628 Mir1961-201ENSMUST00000158643 112 ntBASIC1.32□□□□□ -2.2
Hoxd4P10628 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
Hoxd4P10628 Gm18433-201ENSMUST00000192747 197 ntBASIC1.32□□□□□ -2.2
Hoxd4P10628 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Hoxd4P10628 Gm23500-201ENSMUST00000157735 98 ntBASIC1.31□□□□□ -2.2
Hoxd4P10628 Snord2-201ENSMUST00000157899 69 ntBASIC1.31□□□□□ -2.2
Hoxd4P10628 Gm22100-201ENSMUST00000157926 63 ntBASIC1.31□□□□□ -2.2
Hoxd4P10628 Gm27554-201ENSMUST00000185074 98 ntBASIC1.31□□□□□ -2.2
Hoxd4P10628 Gm44483-201ENSMUST00000197203 97 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 531.9 ms