Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm25901-201ENSMUST00000158494 130 ntBASIC1.12□□□□□ -2.23
Col3a1P08121 Gm44384-201ENSMUST00000200208 114 ntBASIC1.12□□□□□ -2.23
Col3a1P08121 Gm43038-201ENSMUST00000202359 88 ntBASIC1.12□□□□□ -2.23
Col3a1P08121 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.12□□□□□ -2.23
Col3a1P08121 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.12□□□□□ -2.23
Col3a1P08121 Gm25322-201ENSMUST00000122556 104 ntBASIC1.12□□□□□ -2.23
Col3a1P08121 Gm22403-201ENSMUST00000174919 84 ntBASIC1.12□□□□□ -2.23
Col3a1P08121 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.12□□□□□ -2.23
Col3a1P08121 Gm45197-201ENSMUST00000205288 151 ntBASIC1.12□□□□□ -2.23
Col3a1P08121 Gm24162-201ENSMUST00000093665 102 ntBASIC1.12□□□□□ -2.23
Col3a1P08121 Gm25417-201ENSMUST00000104212 131 ntBASIC1.11□□□□□ -2.23
Col3a1P08121 Gm23203-201ENSMUST00000104374 107 ntBASIC1.11□□□□□ -2.23
Col3a1P08121 Gm6985-201ENSMUST00000121255 271 ntBASIC1.11□□□□□ -2.23
Col3a1P08121 Gm22914-201ENSMUST00000175195 77 ntBASIC1.11□□□□□ -2.23
Col3a1P08121 Gm28767-201ENSMUST00000188601 114 ntBASIC1.11□□□□□ -2.23
Col3a1P08121 Gm23482-201ENSMUST00000104172 122 ntBASIC1.1□□□□□ -2.23
Col3a1P08121 Gm25497-201ENSMUST00000104425 132 ntBASIC1.1□□□□□ -2.23
Col3a1P08121 Mir1197-201ENSMUST00000117037 120 ntBASIC1.1□□□□□ -2.23
Col3a1P08121 Gm24064-201ENSMUST00000157486 106 ntBASIC1.1□□□□□ -2.23
Col3a1P08121 Gm22082-201ENSMUST00000157587 161 ntBASIC1.1□□□□□ -2.23
Col3a1P08121 Gm24199-201ENSMUST00000157808 136 ntBASIC1.1□□□□□ -2.23
Col3a1P08121 Mir3061-201ENSMUST00000175129 91 ntBASIC1.1□□□□□ -2.23
Col3a1P08121 Gm22802-201ENSMUST00000175621 89 ntBASIC1.1□□□□□ -2.23
Col3a1P08121 Gm22887-201ENSMUST00000178586 107 ntBASIC1.1□□□□□ -2.23
Col3a1P08121 Gm25798-201ENSMUST00000082641 107 ntBASIC1.1□□□□□ -2.23
Col3a1P08121 Gm25629-201ENSMUST00000084001 107 ntBASIC1.1□□□□□ -2.23
Col3a1P08121 Gm11694-201ENSMUST00000118637 159 ntBASIC1.09□□□□□ -2.24
Col3a1P08121 Gm22095-201ENSMUST00000158984 150 ntBASIC1.09□□□□□ -2.24
Col3a1P08121 Gm25035-201ENSMUST00000175414 77 ntBASIC1.09□□□□□ -2.24
Col3a1P08121 Gm25247-201ENSMUST00000175475 90 ntBASIC1.09□□□□□ -2.24
Col3a1P08121 Gm25354-201ENSMUST00000179110 105 ntBASIC1.09□□□□□ -2.24
Col3a1P08121 Gm27587-201ENSMUST00000185116 163 ntBASIC1.09□□□□□ -2.24
Col3a1P08121 Gm27607-201ENSMUST00000185162 122 ntBASIC1.09□□□□□ -2.24
Col3a1P08121 Gm44602-201ENSMUST00000205948 132 ntBASIC1.09□□□□□ -2.24
Col3a1P08121 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.09□□□□□ -2.24
Col3a1P08121 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.09□□□□□ -2.24
Col3a1P08121 Gm24920-201ENSMUST00000083018 85 ntBASIC1.09□□□□□ -2.24
Col3a1P08121 Gm24988-201ENSMUST00000104460 121 ntBASIC1.08□□□□□ -2.24
Col3a1P08121 Gm24686-201ENSMUST00000157755 93 ntBASIC1.08□□□□□ -2.24
Col3a1P08121 Gm22944-201ENSMUST00000158662 133 ntBASIC1.08□□□□□ -2.24
Col3a1P08121 Gm27517-201ENSMUST00000184347 236 ntBASIC1.08□□□□□ -2.24
Col3a1P08121 Gm28435-201ENSMUST00000185496 108 ntBASIC1.08□□□□□ -2.24
Col3a1P08121 Gm29047-201ENSMUST00000189816 108 ntBASIC1.08□□□□□ -2.24
Col3a1P08121 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.08□□□□□ -2.24
Col3a1P08121 Mir1899-201ENSMUST00000122798 96 ntBASIC1.07□□□□□ -2.24
Col3a1P08121 Gm24868-201ENSMUST00000157265 136 ntBASIC1.07□□□□□ -2.24
Col3a1P08121 Gm24262-201ENSMUST00000157431 144 ntBASIC1.07□□□□□ -2.24
Col3a1P08121 Snord13-201ENSMUST00000157627 104 ntBASIC1.07□□□□□ -2.24
Col3a1P08121 Gm24077-201ENSMUST00000158183 136 ntBASIC1.07□□□□□ -2.24
Col3a1P08121 Gm24728-201ENSMUST00000158226 125 ntBASIC1.07□□□□□ -2.24
Col3a1P08121 Gm23763-201ENSMUST00000158345 60 ntBASIC1.07□□□□□ -2.24
Col3a1P08121 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.07□□□□□ -2.24
Col3a1P08121 Gm23376-201ENSMUST00000082938 160 ntBASIC1.07□□□□□ -2.24
Col3a1P08121 Gm23570-201ENSMUST00000083029 104 ntBASIC1.07□□□□□ -2.24
Col3a1P08121 Gm23100-201ENSMUST00000083455 141 ntBASIC1.07□□□□□ -2.24
Col3a1P08121 Gm25847-201ENSMUST00000116793 96 ntBASIC1.06□□□□□ -2.24
Col3a1P08121 Gm25423-201ENSMUST00000157609 107 ntBASIC1.06□□□□□ -2.24
Col3a1P08121 CT030166.3-201ENSMUST00000223203 193 ntBASIC1.06□□□□□ -2.24
Col3a1P08121 Snord60-201ENSMUST00000082834 78 ntBASIC1.06□□□□□ -2.24
Col3a1P08121 Gm26207-201ENSMUST00000082909 104 ntBASIC1.06□□□□□ -2.24
Col3a1P08121 Gm24579-201ENSMUST00000103964 144 ntBASIC1.05□□□□□ -2.24
Col3a1P08121 Gm22544-201ENSMUST00000104349 127 ntBASIC1.05□□□□□ -2.24
Col3a1P08121 Gm23881-201ENSMUST00000116872 66 ntBASIC1.05□□□□□ -2.24
Col3a1P08121 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.05□□□□□ -2.24
Col3a1P08121 Gm25160-201ENSMUST00000158914 102 ntBASIC1.05□□□□□ -2.24
Col3a1P08121 Gm25870-201ENSMUST00000179845 79 ntBASIC1.05□□□□□ -2.24
Col3a1P08121 Gm25936-201ENSMUST00000179952 114 ntBASIC1.05□□□□□ -2.24
Col3a1P08121 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
Col3a1P08121 Gm12469-201ENSMUST00000117623 207 ntBASIC1.05□□□□□ -2.24
Col3a1P08121 Gm24648-201ENSMUST00000157111 132 ntBASIC1.05□□□□□ -2.24
Col3a1P08121 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.05□□□□□ -2.24
Col3a1P08121 Gm23419-201ENSMUST00000175523 84 ntBASIC1.05□□□□□ -2.24
Col3a1P08121 Gm42533-201ENSMUST00000196247 157 ntBASIC1.05□□□□□ -2.24
Col3a1P08121 Gm24918-201ENSMUST00000083022 130 ntBASIC1.05□□□□□ -2.24
Col3a1P08121 Mir29a-201ENSMUST00000083676 88 ntBASIC1.05□□□□□ -2.24
Col3a1P08121 Mir223-201ENSMUST00000102112 110 ntBASIC1.04□□□□□ -2.24
Col3a1P08121 Gm24323-201ENSMUST00000175342 77 ntBASIC1.04□□□□□ -2.24
Col3a1P08121 Gm28862-201ENSMUST00000188246 163 ntBASIC1.04□□□□□ -2.24
Col3a1P08121 Gm20305-201ENSMUST00000193226 177 ntBASIC1.04□□□□□ -2.24
Col3a1P08121 Mir509-201ENSMUST00000196089 75 ntBASIC1.04□□□□□ -2.24
Col3a1P08121 Gm25495-201ENSMUST00000104431 131 ntBASIC1.03□□□□□ -2.24
Col3a1P08121 Gm24588-201ENSMUST00000116696 83 ntBASIC1.03□□□□□ -2.24
Col3a1P08121 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.03□□□□□ -2.24
Col3a1P08121 Mir3109-201ENSMUST00000175301 88 ntBASIC1.03□□□□□ -2.24
Col3a1P08121 Gm22862-201ENSMUST00000178593 121 ntBASIC1.03□□□□□ -2.24
Col3a1P08121 Gm22809-201ENSMUST00000082743 156 ntBASIC1.03□□□□□ -2.24
Col3a1P08121 Gm25650-201ENSMUST00000083784 162 ntBASIC1.03□□□□□ -2.24
Col3a1P08121 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.25
Col3a1P08121 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.02□□□□□ -2.25
Col3a1P08121 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Col3a1P08121 Mir544-201ENSMUST00000103813 78 ntBASIC1.02□□□□□ -2.25
Col3a1P08121 Gm13577-201ENSMUST00000121365 205 ntBASIC1.02□□□□□ -2.25
Col3a1P08121 Gm23661-201ENSMUST00000122630 87 ntBASIC1.02□□□□□ -2.25
Col3a1P08121 Gm26712-201ENSMUST00000180813 217 ntBASIC1.02□□□□□ -2.25
Col3a1P08121 Gm27297-201ENSMUST00000183395 105 ntBASIC1.02□□□□□ -2.25
Col3a1P08121 Gm6293-201ENSMUST00000050339 195 ntBASIC1.02□□□□□ -2.25
Col3a1P08121 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.01□□□□□ -2.25
Col3a1P08121 Gm23106-201ENSMUST00000157554 101 ntBASIC1.01□□□□□ -2.25
Col3a1P08121 Gm24129-201ENSMUST00000158537 97 ntBASIC1.01□□□□□ -2.25
Col3a1P08121 Gm26499-201ENSMUST00000178544 79 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 147.5 ms