Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm25040-201ENSMUST00000103877 66 ntBASIC0.29□□□□□ -2.36
H2afb2S4R1M3 Gm23065-201ENSMUST00000158236 130 ntBASIC0.29□□□□□ -2.36
H2afb2S4R1M3 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.29□□□□□ -2.36
H2afb2S4R1M3 Gm23678-201ENSMUST00000083157 107 ntBASIC0.29□□□□□ -2.36
H2afb2S4R1M3 Mir216b-201ENSMUST00000102363 86 ntBASIC0.28□□□□□ -2.36
H2afb2S4R1M3 Gm24233-201ENSMUST00000104317 122 ntBASIC0.28□□□□□ -2.36
H2afb2S4R1M3 Mir3105-201ENSMUST00000175480 85 ntBASIC0.28□□□□□ -2.36
H2afb2S4R1M3 Gm26498-201ENSMUST00000177799 79 ntBASIC0.28□□□□□ -2.36
H2afb2S4R1M3 Gm26230-201ENSMUST00000180141 79 ntBASIC0.28□□□□□ -2.36
H2afb2S4R1M3 Gm26202-201ENSMUST00000082910 65 ntBASIC0.28□□□□□ -2.36
H2afb2S4R1M3 Gm23507-201ENSMUST00000083078 107 ntBASIC0.28□□□□□ -2.36
H2afb2S4R1M3 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.28□□□□□ -2.36
H2afb2S4R1M3 Gm22788-201ENSMUST00000157876 61 ntBASIC0.27□□□□□ -2.37
H2afb2S4R1M3 Gm27297-201ENSMUST00000183395 105 ntBASIC0.27□□□□□ -2.37
H2afb2S4R1M3 Gm27475-201ENSMUST00000183420 61 ntBASIC0.27□□□□□ -2.37
H2afb2S4R1M3 Mir6394-201ENSMUST00000184738 99 ntBASIC0.27□□□□□ -2.37
H2afb2S4R1M3 Mir7065-201ENSMUST00000185110 61 ntBASIC0.27□□□□□ -2.37
H2afb2S4R1M3 Gm38295-201ENSMUST00000191951 151 ntBASIC0.27□□□□□ -2.37
H2afb2S4R1M3 Gm42845-201ENSMUST00000197766 105 ntBASIC0.27□□□□□ -2.37
H2afb2S4R1M3 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
H2afb2S4R1M3 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.27□□□□□ -2.37
H2afb2S4R1M3 Gm22003-201ENSMUST00000101885 107 ntBASIC0.26□□□□□ -2.37
H2afb2S4R1M3 Gm24278-201ENSMUST00000104239 127 ntBASIC0.26□□□□□ -2.37
H2afb2S4R1M3 Gm23321-201ENSMUST00000104465 126 ntBASIC0.26□□□□□ -2.37
H2afb2S4R1M3 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.26□□□□□ -2.37
H2afb2S4R1M3 Gm22089-201ENSMUST00000158336 102 ntBASIC0.26□□□□□ -2.37
H2afb2S4R1M3 Gm23410-201ENSMUST00000179967 107 ntBASIC0.26□□□□□ -2.37
H2afb2S4R1M3 Gm22756-201ENSMUST00000180118 107 ntBASIC0.26□□□□□ -2.37
H2afb2S4R1M3 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.26□□□□□ -2.37
H2afb2S4R1M3 Gm22505-201ENSMUST00000082956 108 ntBASIC0.26□□□□□ -2.37
H2afb2S4R1M3 Gm22363-201ENSMUST00000083100 108 ntBASIC0.26□□□□□ -2.37
H2afb2S4R1M3 Gm23814-201ENSMUST00000083230 102 ntBASIC0.26□□□□□ -2.37
H2afb2S4R1M3 Gm23095-201ENSMUST00000083446 107 ntBASIC0.26□□□□□ -2.37
H2afb2S4R1M3 Gm25629-201ENSMUST00000084001 107 ntBASIC0.26□□□□□ -2.37
H2afb2S4R1M3 Gm22031-201ENSMUST00000116945 126 ntBASIC0.25□□□□□ -2.37
H2afb2S4R1M3 Gm24379-201ENSMUST00000122695 86 ntBASIC0.25□□□□□ -2.37
H2afb2S4R1M3 Gm26116-201ENSMUST00000175600 77 ntBASIC0.25□□□□□ -2.37
H2afb2S4R1M3 Gm27943-201ENSMUST00000184844 116 ntBASIC0.25□□□□□ -2.37
H2afb2S4R1M3 Gm28270-201ENSMUST00000188550 109 ntBASIC0.25□□□□□ -2.37
H2afb2S4R1M3 Gm28328-201ENSMUST00000188869 109 ntBASIC0.25□□□□□ -2.37
H2afb2S4R1M3 Gm44458-201ENSMUST00000196594 143 ntBASIC0.25□□□□□ -2.37
H2afb2S4R1M3 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
H2afb2S4R1M3 Gm25635-201ENSMUST00000082675 131 ntBASIC0.25□□□□□ -2.37
H2afb2S4R1M3 Gm23654-201ENSMUST00000116758 126 ntBASIC0.24□□□□□ -2.37
H2afb2S4R1M3 Gm24399-201ENSMUST00000157869 74 ntBASIC0.24□□□□□ -2.37
H2afb2S4R1M3 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.24□□□□□ -2.37
H2afb2S4R1M3 Gm27717-201ENSMUST00000183933 151 ntBASIC0.24□□□□□ -2.37
H2afb2S4R1M3 Gm45429-201ENSMUST00000209527 172 ntBASIC0.24□□□□□ -2.37
H2afb2S4R1M3 Gm22652-201ENSMUST00000083207 131 ntBASIC0.24□□□□□ -2.37
H2afb2S4R1M3 Gm10813-201ENSMUST00000099936 90 ntBASIC0.24□□□□□ -2.37
H2afb2S4R1M3 Gm24833-201ENSMUST00000116775 120 ntBASIC0.23□□□□□ -2.37
H2afb2S4R1M3 Gm24686-201ENSMUST00000157755 93 ntBASIC0.23□□□□□ -2.37
H2afb2S4R1M3 Gm24963-201ENSMUST00000157916 144 ntBASIC0.23□□□□□ -2.37
H2afb2S4R1M3 Gm22503-201ENSMUST00000158983 115 ntBASIC0.23□□□□□ -2.37
H2afb2S4R1M3 Gm22303-201ENSMUST00000082686 122 ntBASIC0.23□□□□□ -2.37
H2afb2S4R1M3 Snord78-201ENSMUST00000104032 66 ntBASIC0.22□□□□□ -2.37
H2afb2S4R1M3 Gm22319-201ENSMUST00000157147 122 ntBASIC0.22□□□□□ -2.37
H2afb2S4R1M3 Gm25887-201ENSMUST00000157777 84 ntBASIC0.22□□□□□ -2.37
H2afb2S4R1M3 Snord80-201ENSMUST00000083801 81 ntBASIC0.22□□□□□ -2.37
H2afb2S4R1M3 Gm44327-201ENSMUST00000200068 117 ntBASIC0.21□□□□□ -2.38
H2afb2S4R1M3 Gm3702-201ENSMUST00000211754 346 ntBASIC0.21□□□□□ -2.38
H2afb2S4R1M3 Gm25006-201ENSMUST00000083813 107 ntBASIC0.21□□□□□ -2.38
H2afb2S4R1M3 Gm25408-201ENSMUST00000104104 133 ntBASIC0.2□□□□□ -2.38
H2afb2S4R1M3 Gm23434-201ENSMUST00000157179 100 ntBASIC0.2□□□□□ -2.38
H2afb2S4R1M3 Gm23601-201ENSMUST00000157259 131 ntBASIC0.2□□□□□ -2.38
H2afb2S4R1M3 Gm24916-201ENSMUST00000157287 79 ntBASIC0.2□□□□□ -2.38
H2afb2S4R1M3 Gm23900-201ENSMUST00000157569 108 ntBASIC0.2□□□□□ -2.38
H2afb2S4R1M3 Gm25370-201ENSMUST00000158159 94 ntBASIC0.2□□□□□ -2.38
H2afb2S4R1M3 Scarna8-201ENSMUST00000158333 131 ntBASIC0.2□□□□□ -2.38
H2afb2S4R1M3 Gm23350-201ENSMUST00000158429 103 ntBASIC0.2□□□□□ -2.38
H2afb2S4R1M3 Gm24676-201ENSMUST00000158758 75 ntBASIC0.2□□□□□ -2.38
H2afb2S4R1M3 Gm23966-201ENSMUST00000179823 107 ntBASIC0.2□□□□□ -2.38
H2afb2S4R1M3 Gm26712-201ENSMUST00000180813 217 ntBASIC0.2□□□□□ -2.38
H2afb2S4R1M3 Mir6985-201ENSMUST00000184641 61 ntBASIC0.2□□□□□ -2.38
H2afb2S4R1M3 Gm26454-201ENSMUST00000082682 107 ntBASIC0.2□□□□□ -2.38
H2afb2S4R1M3 Gm25812-201ENSMUST00000082751 103 ntBASIC0.2□□□□□ -2.38
H2afb2S4R1M3 Gm23708-201ENSMUST00000104367 123 ntBASIC0.19□□□□□ -2.38
H2afb2S4R1M3 Gm25014-201ENSMUST00000158401 103 ntBASIC0.19□□□□□ -2.38
H2afb2S4R1M3 Gm43927-201ENSMUST00000204599 117 ntBASIC0.19□□□□□ -2.38
H2afb2S4R1M3 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.19□□□□□ -2.38
H2afb2S4R1M3 Gm24468-201ENSMUST00000104489 104 ntBASIC0.18□□□□□ -2.38
H2afb2S4R1M3 Gm26133-201ENSMUST00000157363 100 ntBASIC0.18□□□□□ -2.38
H2afb2S4R1M3 Gm23044-201ENSMUST00000157891 100 ntBASIC0.18□□□□□ -2.38
H2afb2S4R1M3 Gm23821-201ENSMUST00000158738 106 ntBASIC0.18□□□□□ -2.38
H2afb2S4R1M3 Mir3108-201ENSMUST00000175500 79 ntBASIC0.18□□□□□ -2.38
H2afb2S4R1M3 Gm24208-201ENSMUST00000082783 135 ntBASIC0.18□□□□□ -2.38
H2afb2S4R1M3 Gm26062-201ENSMUST00000083379 107 ntBASIC0.18□□□□□ -2.38
H2afb2S4R1M3 Gm24648-201ENSMUST00000157111 132 ntBASIC0.17□□□□□ -2.38
H2afb2S4R1M3 Gm25425-201ENSMUST00000157611 96 ntBASIC0.17□□□□□ -2.38
H2afb2S4R1M3 Gm24947-201ENSMUST00000158334 110 ntBASIC0.17□□□□□ -2.38
H2afb2S4R1M3 Gm25618-201ENSMUST00000179484 107 ntBASIC0.17□□□□□ -2.38
H2afb2S4R1M3 Gm28001-201ENSMUST00000183561 117 ntBASIC0.17□□□□□ -2.38
H2afb2S4R1M3 Gm43907-201ENSMUST00000203128 117 ntBASIC0.17□□□□□ -2.38
H2afb2S4R1M3 Gm23344-201ENSMUST00000083818 68 ntBASIC0.17□□□□□ -2.38
H2afb2S4R1M3 Mir710-201ENSMUST00000102088 110 ntBASIC0.16□□□□□ -2.38
H2afb2S4R1M3 Gm25416-201ENSMUST00000104221 107 ntBASIC0.16□□□□□ -2.38
H2afb2S4R1M3 Gm43977-201ENSMUST00000203970 189 ntBASIC0.16□□□□□ -2.38
H2afb2S4R1M3 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.16□□□□□ -2.38
H2afb2S4R1M3 Gm22981-201ENSMUST00000082611 75 ntBASIC0.16□□□□□ -2.38
H2afb2S4R1M3 Mir18-201ENSMUST00000083469 96 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 173.9 ms