Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm22775-201ENSMUST00000177630 120 ntBASIC0.15□□□□□ -2.39
Cpsf3Q9QXK7 Gm23569-201ENSMUST00000180120 120 ntBASIC0.15□□□□□ -2.39
Cpsf3Q9QXK7 Gm28001-201ENSMUST00000183561 117 ntBASIC0.15□□□□□ -2.39
Cpsf3Q9QXK7 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.15□□□□□ -2.39
Cpsf3Q9QXK7 Gm25056-201ENSMUST00000157372 62 ntBASIC0.14□□□□□ -2.39
Cpsf3Q9QXK7 Gm25952-201ENSMUST00000175329 74 ntBASIC0.14□□□□□ -2.39
Cpsf3Q9QXK7 Gm43927-201ENSMUST00000204599 117 ntBASIC0.14□□□□□ -2.39
Cpsf3Q9QXK7 Gm24449-201ENSMUST00000083985 106 ntBASIC0.14□□□□□ -2.39
Cpsf3Q9QXK7 Gm23060-201ENSMUST00000102345 109 ntBASIC0.13□□□□□ -2.39
Cpsf3Q9QXK7 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
Cpsf3Q9QXK7 Gm24649-201ENSMUST00000157106 134 ntBASIC0.13□□□□□ -2.39
Cpsf3Q9QXK7 Gm22788-201ENSMUST00000157876 61 ntBASIC0.13□□□□□ -2.39
Cpsf3Q9QXK7 Gm22708-201ENSMUST00000158987 103 ntBASIC0.13□□□□□ -2.39
Cpsf3Q9QXK7 Gm27699-201ENSMUST00000183553 180 ntBASIC0.13□□□□□ -2.39
Cpsf3Q9QXK7 Mir7079-201ENSMUST00000184697 69 ntBASIC0.13□□□□□ -2.39
Cpsf3Q9QXK7 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.13□□□□□ -2.39
Cpsf3Q9QXK7 Mir802-201ENSMUST00000103258 97 ntBASIC0.12□□□□□ -2.39
Cpsf3Q9QXK7 Gm24555-201ENSMUST00000104548 124 ntBASIC0.12□□□□□ -2.39
Cpsf3Q9QXK7 Gm22089-201ENSMUST00000158336 102 ntBASIC0.12□□□□□ -2.39
Cpsf3Q9QXK7 Mir6896-201ENSMUST00000198033 73 ntBASIC0.12□□□□□ -2.39
Cpsf3Q9QXK7 Gm44327-201ENSMUST00000200068 117 ntBASIC0.12□□□□□ -2.39
Cpsf3Q9QXK7 Gm24073-201ENSMUST00000158177 106 ntBASIC0.11□□□□□ -2.39
Cpsf3Q9QXK7 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.11□□□□□ -2.39
Cpsf3Q9QXK7 Mir8107-201ENSMUST00000184024 117 ntBASIC0.11□□□□□ -2.39
Cpsf3Q9QXK7 Gm44470-201ENSMUST00000203913 142 ntBASIC0.11□□□□□ -2.39
Cpsf3Q9QXK7 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.1□□□□□ -2.39
Cpsf3Q9QXK7 Gm24772-201ENSMUST00000158507 110 ntBASIC0.1□□□□□ -2.39
Cpsf3Q9QXK7 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Cpsf3Q9QXK7 Gm25623-201ENSMUST00000157216 108 ntBASIC0.09□□□□□ -2.4
Cpsf3Q9QXK7 Gm23351-201ENSMUST00000158427 125 ntBASIC0.09□□□□□ -2.4
Cpsf3Q9QXK7 Gm22911-201ENSMUST00000177920 107 ntBASIC0.09□□□□□ -2.4
Cpsf3Q9QXK7 Gm38295-201ENSMUST00000191951 151 ntBASIC0.09□□□□□ -2.4
Cpsf3Q9QXK7 Gm42845-201ENSMUST00000197766 105 ntBASIC0.09□□□□□ -2.4
Cpsf3Q9QXK7 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.09□□□□□ -2.4
Cpsf3Q9QXK7 Snord95-201ENSMUST00000082846 68 ntBASIC0.09□□□□□ -2.4
Cpsf3Q9QXK7 Mir18-201ENSMUST00000083469 96 ntBASIC0.09□□□□□ -2.4
Cpsf3Q9QXK7 Gm25006-201ENSMUST00000083813 107 ntBASIC0.09□□□□□ -2.4
Cpsf3Q9QXK7 Gm22772-201ENSMUST00000104451 121 ntBASIC0.08□□□□□ -2.4
Cpsf3Q9QXK7 Gm26412-201ENSMUST00000157666 55 ntBASIC0.08□□□□□ -2.4
Cpsf3Q9QXK7 Gm26369-201ENSMUST00000157825 100 ntBASIC0.08□□□□□ -2.4
Cpsf3Q9QXK7 Gm27980-201ENSMUST00000184094 169 ntBASIC0.08□□□□□ -2.4
Cpsf3Q9QXK7 Gm44803-201ENSMUST00000204384 156 ntBASIC0.08□□□□□ -2.4
Cpsf3Q9QXK7 Gm45197-201ENSMUST00000205288 151 ntBASIC0.08□□□□□ -2.4
Cpsf3Q9QXK7 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.08□□□□□ -2.4
Cpsf3Q9QXK7 Gm24683-201ENSMUST00000104840 88 ntBASIC0.07□□□□□ -2.4
Cpsf3Q9QXK7 Gm23654-201ENSMUST00000116758 126 ntBASIC0.07□□□□□ -2.4
Cpsf3Q9QXK7 Gm23761-201ENSMUST00000158347 104 ntBASIC0.07□□□□□ -2.4
Cpsf3Q9QXK7 Gm44490-201ENSMUST00000198566 127 ntBASIC0.07□□□□□ -2.4
Cpsf3Q9QXK7 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.07□□□□□ -2.4
Cpsf3Q9QXK7 Gm23900-201ENSMUST00000157569 108 ntBASIC0.06□□□□□ -2.4
Cpsf3Q9QXK7 Gm24842-201ENSMUST00000158681 54 ntBASIC0.06□□□□□ -2.4
Cpsf3Q9QXK7 Gm26337-201ENSMUST00000178000 79 ntBASIC0.06□□□□□ -2.4
Cpsf3Q9QXK7 Gm22981-201ENSMUST00000082611 75 ntBASIC0.06□□□□□ -2.4
Cpsf3Q9QXK7 Gm25787-201ENSMUST00000104709 92 ntBASIC0.05□□□□□ -2.4
Cpsf3Q9QXK7 Gm23601-201ENSMUST00000157259 131 ntBASIC0.05□□□□□ -2.4
Cpsf3Q9QXK7 Gm24399-201ENSMUST00000157869 74 ntBASIC0.05□□□□□ -2.4
Cpsf3Q9QXK7 Gm26498-201ENSMUST00000177799 79 ntBASIC0.05□□□□□ -2.4
Cpsf3Q9QXK7 Gm26230-201ENSMUST00000180141 79 ntBASIC0.05□□□□□ -2.4
Cpsf3Q9QXK7 Gm28270-201ENSMUST00000188550 109 ntBASIC0.05□□□□□ -2.4
Cpsf3Q9QXK7 Gm28328-201ENSMUST00000188869 109 ntBASIC0.05□□□□□ -2.4
Cpsf3Q9QXK7 Gm29047-201ENSMUST00000189816 108 ntBASIC0.05□□□□□ -2.4
Cpsf3Q9QXK7 Gm23986-201ENSMUST00000157144 63 ntBASIC0.04□□□□□ -2.4
Cpsf3Q9QXK7 Gm26133-201ENSMUST00000157363 100 ntBASIC0.04□□□□□ -2.4
Cpsf3Q9QXK7 Gm22638-201ENSMUST00000179674 107 ntBASIC0.04□□□□□ -2.4
Cpsf3Q9QXK7 Gm27851-201ENSMUST00000183529 63 ntBASIC0.04□□□□□ -2.4
Cpsf3Q9QXK7 Gm23239-201ENSMUST00000083006 181 ntBASIC0.04□□□□□ -2.4
Cpsf3Q9QXK7 Gm22196-201ENSMUST00000116865 109 ntBASIC0.03□□□□□ -2.4
Cpsf3Q9QXK7 Gm44345-201ENSMUST00000199560 135 ntBASIC0.03□□□□□ -2.4
Cpsf3Q9QXK7 Gm25014-201ENSMUST00000158401 103 ntBASIC0.02□□□□□ -2.41
Cpsf3Q9QXK7 Gm26291-201ENSMUST00000158889 137 ntBASIC0.02□□□□□ -2.41
Cpsf3Q9QXK7 Gm25071-201ENSMUST00000175232 70 ntBASIC0.02□□□□□ -2.41
Cpsf3Q9QXK7 Gm23922-201ENSMUST00000178792 79 ntBASIC0.02□□□□□ -2.41
Cpsf3Q9QXK7 Gm24657-201ENSMUST00000180085 79 ntBASIC0.02□□□□□ -2.41
Cpsf3Q9QXK7 Gm22996-201ENSMUST00000180236 79 ntBASIC0.02□□□□□ -2.41
Cpsf3Q9QXK7 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.02□□□□□ -2.41
Cpsf3Q9QXK7 Gm22368-201ENSMUST00000102416 109 ntBASIC0.01□□□□□ -2.41
Cpsf3Q9QXK7 Gm23531-201ENSMUST00000104567 68 ntBASIC0.01□□□□□ -2.41
Cpsf3Q9QXK7 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.01□□□□□ -2.41
Cpsf3Q9QXK7 Gm17528-201ENSMUST00000171026 239 ntBASIC0.01□□□□□ -2.41
Cpsf3Q9QXK7 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Cpsf3Q9QXK7 Snord64-201ENSMUST00000104003 67 ntBASIC0□□□□□ -2.41
Cpsf3Q9QXK7 Gm23651-201ENSMUST00000116755 120 ntBASIC0□□□□□ -2.41
Cpsf3Q9QXK7 Gm24884-201ENSMUST00000158784 119 ntBASIC0□□□□□ -2.41
Cpsf3Q9QXK7 Gm38208-201ENSMUST00000192476 114 ntBASIC0□□□□□ -2.41
Cpsf3Q9QXK7 Gm43907-201ENSMUST00000203128 117 ntBASIC0□□□□□ -2.41
Cpsf3Q9QXK7 Gm26062-201ENSMUST00000083379 107 ntBASIC0□□□□□ -2.41
Cpsf3Q9QXK7 Gm23347-201ENSMUST00000083823 82 ntBASIC0□□□□□ -2.41
Cpsf3Q9QXK7 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.01□□□□□ -2.41
Cpsf3Q9QXK7 Gm24648-201ENSMUST00000157111 132 ntBASIC-0.01□□□□□ -2.41
Cpsf3Q9QXK7 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.01□□□□□ -2.41
Cpsf3Q9QXK7 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.01□□□□□ -2.41
Cpsf3Q9QXK7 Gm44859-201ENSMUST00000207831 94 ntBASIC-0.01□□□□□ -2.41
Cpsf3Q9QXK7 Gm24686-201ENSMUST00000157755 93 ntBASIC-0.02□□□□□ -2.41
Cpsf3Q9QXK7 Gm23065-201ENSMUST00000158236 130 ntBASIC-0.02□□□□□ -2.41
Cpsf3Q9QXK7 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.02□□□□□ -2.41
Cpsf3Q9QXK7 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.02□□□□□ -2.41
Cpsf3Q9QXK7 Gm25618-201ENSMUST00000179484 107 ntBASIC-0.02□□□□□ -2.41
Cpsf3Q9QXK7 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.02□□□□□ -2.41
Cpsf3Q9QXK7 Mir382-201ENSMUST00000083494 76 ntBASIC-0.02□□□□□ -2.41
Cpsf3Q9QXK7 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms