Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm22205-201ENSMUST00000122655 71 ntBASIC1.34□□□□□ -2.19
Sec61a2Q9JLR1 Gm23857-201ENSMUST00000158379 111 ntBASIC1.34□□□□□ -2.19
Sec61a2Q9JLR1 Gm23114-201ENSMUST00000158478 117 ntBASIC1.34□□□□□ -2.19
Sec61a2Q9JLR1 Gm7258-201ENSMUST00000179317 300 ntBASIC1.34□□□□□ -2.19
Sec61a2Q9JLR1 Gm22753-201ENSMUST00000083657 107 ntBASIC1.34□□□□□ -2.19
Sec61a2Q9JLR1 Mir29a-201ENSMUST00000083676 88 ntBASIC1.34□□□□□ -2.19
Sec61a2Q9JLR1 Gm24262-201ENSMUST00000157431 144 ntBASIC1.33□□□□□ -2.2
Sec61a2Q9JLR1 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.33□□□□□ -2.2
Sec61a2Q9JLR1 Gm22732-201ENSMUST00000158093 121 ntBASIC1.33□□□□□ -2.2
Sec61a2Q9JLR1 Snord96a-201ENSMUST00000082791 81 ntBASIC1.33□□□□□ -2.2
Sec61a2Q9JLR1 Gm25644-201ENSMUST00000083209 107 ntBASIC1.33□□□□□ -2.2
Sec61a2Q9JLR1 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Sec61a2Q9JLR1 Mir709-201ENSMUST00000102190 88 ntBASIC1.32□□□□□ -2.2
Sec61a2Q9JLR1 Gm24588-201ENSMUST00000116696 83 ntBASIC1.32□□□□□ -2.2
Sec61a2Q9JLR1 Gm26478-201ENSMUST00000122611 133 ntBASIC1.32□□□□□ -2.2
Sec61a2Q9JLR1 Snora26-201ENSMUST00000175614 121 ntBASIC1.32□□□□□ -2.2
Sec61a2Q9JLR1 Gm38295-201ENSMUST00000191951 151 ntBASIC1.32□□□□□ -2.2
Sec61a2Q9JLR1 Gm44469-201ENSMUST00000198558 79 ntBASIC1.32□□□□□ -2.2
Sec61a2Q9JLR1 Gm25696-201ENSMUST00000082900 105 ntBASIC1.32□□□□□ -2.2
Sec61a2Q9JLR1 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.31□□□□□ -2.2
Sec61a2Q9JLR1 Gm23130-201ENSMUST00000104252 74 ntBASIC1.31□□□□□ -2.2
Sec61a2Q9JLR1 Gm24895-201ENSMUST00000122742 74 ntBASIC1.31□□□□□ -2.2
Sec61a2Q9JLR1 Gm24009-201ENSMUST00000157734 93 ntBASIC1.31□□□□□ -2.2
Sec61a2Q9JLR1 Gm22099-201ENSMUST00000157925 123 ntBASIC1.31□□□□□ -2.2
Sec61a2Q9JLR1 Gm25600-201ENSMUST00000158357 106 ntBASIC1.31□□□□□ -2.2
Sec61a2Q9JLR1 Gm10548-202ENSMUST00000165672 272 ntBASIC1.31□□□□□ -2.2
Sec61a2Q9JLR1 Gm27898-201ENSMUST00000183987 80 ntBASIC1.31□□□□□ -2.2
Sec61a2Q9JLR1 Mir324-201ENSMUST00000083600 89 ntBASIC1.31□□□□□ -2.2
Sec61a2Q9JLR1 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Sec61a2Q9JLR1 Mir301b-201ENSMUST00000102333 97 ntBASIC1.3□□□□□ -2.2
Sec61a2Q9JLR1 Gm25541-201ENSMUST00000116888 126 ntBASIC1.3□□□□□ -2.2
Sec61a2Q9JLR1 Gm24648-201ENSMUST00000157111 132 ntBASIC1.3□□□□□ -2.2
Sec61a2Q9JLR1 Gm24476-201ENSMUST00000157437 131 ntBASIC1.3□□□□□ -2.2
Sec61a2Q9JLR1 Gm24902-201ENSMUST00000158126 123 ntBASIC1.3□□□□□ -2.2
Sec61a2Q9JLR1 Gm25693-201ENSMUST00000175443 85 ntBASIC1.3□□□□□ -2.2
Sec61a2Q9JLR1 Gm27493-201ENSMUST00000184128 78 ntBASIC1.3□□□□□ -2.2
Sec61a2Q9JLR1 Gm36956-201ENSMUST00000193830 214 ntBASIC1.3□□□□□ -2.2
Sec61a2Q9JLR1 Mir3087-201ENSMUST00000199405 56 ntBASIC1.3□□□□□ -2.2
Sec61a2Q9JLR1 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.3□□□□□ -2.2
Sec61a2Q9JLR1 Gm24162-201ENSMUST00000093665 102 ntBASIC1.3□□□□□ -2.2
Sec61a2Q9JLR1 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Sec61a2Q9JLR1 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
Sec61a2Q9JLR1 Mir1950-201ENSMUST00000158526 74 ntBASIC1.29□□□□□ -2.2
Sec61a2Q9JLR1 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.29□□□□□ -2.2
Sec61a2Q9JLR1 Gm43944-201ENSMUST00000205220 120 ntBASIC1.29□□□□□ -2.2
Sec61a2Q9JLR1 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.29□□□□□ -2.2
Sec61a2Q9JLR1 Gm26224-201ENSMUST00000082506 80 ntBASIC1.29□□□□□ -2.2
Sec61a2Q9JLR1 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Sec61a2Q9JLR1 Gm24290-201ENSMUST00000157634 96 ntBASIC1.28□□□□□ -2.2
Sec61a2Q9JLR1 Gm26158-201ENSMUST00000158973 119 ntBASIC1.28□□□□□ -2.2
Sec61a2Q9JLR1 Mir7009-201ENSMUST00000184519 64 ntBASIC1.28□□□□□ -2.2
Sec61a2Q9JLR1 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.28□□□□□ -2.2
Sec61a2Q9JLR1 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.28□□□□□ -2.2
Sec61a2Q9JLR1 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.28□□□□□ -2.2
Sec61a2Q9JLR1 Gm25542-201ENSMUST00000116889 94 ntBASIC1.27□□□□□ -2.21
Sec61a2Q9JLR1 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.27□□□□□ -2.21
Sec61a2Q9JLR1 Gm24129-201ENSMUST00000158537 97 ntBASIC1.27□□□□□ -2.21
Sec61a2Q9JLR1 Gm25974-201ENSMUST00000158701 94 ntBASIC1.27□□□□□ -2.21
Sec61a2Q9JLR1 Mir509-201ENSMUST00000196089 75 ntBASIC1.27□□□□□ -2.21
Sec61a2Q9JLR1 Gm25854-201ENSMUST00000082792 72 ntBASIC1.27□□□□□ -2.21
Sec61a2Q9JLR1 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.27□□□□□ -2.21
Sec61a2Q9JLR1 Gm23122-201ENSMUST00000157645 103 ntBASIC1.26□□□□□ -2.21
Sec61a2Q9JLR1 Gm23221-201ENSMUST00000158118 93 ntBASIC1.26□□□□□ -2.21
Sec61a2Q9JLR1 Gm24076-201ENSMUST00000158179 94 ntBASIC1.26□□□□□ -2.21
Sec61a2Q9JLR1 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.26□□□□□ -2.21
Sec61a2Q9JLR1 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.26□□□□□ -2.21
Sec61a2Q9JLR1 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.26□□□□□ -2.21
Sec61a2Q9JLR1 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.25□□□□□ -2.21
Sec61a2Q9JLR1 Mir653-201ENSMUST00000102402 85 ntBASIC1.25□□□□□ -2.21
Sec61a2Q9JLR1 Mir1187-201ENSMUST00000116936 122 ntBASIC1.25□□□□□ -2.21
Sec61a2Q9JLR1 Gm27297-201ENSMUST00000183395 105 ntBASIC1.25□□□□□ -2.21
Sec61a2Q9JLR1 Gm27993-201ENSMUST00000184362 85 ntBASIC1.25□□□□□ -2.21
Sec61a2Q9JLR1 Gm28435-201ENSMUST00000185496 108 ntBASIC1.25□□□□□ -2.21
Sec61a2Q9JLR1 Gm29047-201ENSMUST00000189816 108 ntBASIC1.25□□□□□ -2.21
Sec61a2Q9JLR1 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.25□□□□□ -2.21
Sec61a2Q9JLR1 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Sec61a2Q9JLR1 Gm25322-201ENSMUST00000122556 104 ntBASIC1.24□□□□□ -2.21
Sec61a2Q9JLR1 Gm26089-201ENSMUST00000157898 107 ntBASIC1.24□□□□□ -2.21
Sec61a2Q9JLR1 Gm24547-201ENSMUST00000158649 149 ntBASIC1.24□□□□□ -2.21
Sec61a2Q9JLR1 Mir1933-201ENSMUST00000158930 88 ntBASIC1.24□□□□□ -2.21
Sec61a2Q9JLR1 Traj60-201ENSMUST00000167781 54 ntBASIC1.24□□□□□ -2.21
Sec61a2Q9JLR1 Gm26202-201ENSMUST00000082910 65 ntBASIC1.24□□□□□ -2.21
Sec61a2Q9JLR1 Gm23336-201ENSMUST00000117023 123 ntBASIC1.23□□□□□ -2.21
Sec61a2Q9JLR1 Gm22067-201ENSMUST00000122790 107 ntBASIC1.23□□□□□ -2.21
Sec61a2Q9JLR1 Gm24946-201ENSMUST00000158332 106 ntBASIC1.23□□□□□ -2.21
Sec61a2Q9JLR1 Gm25740-201ENSMUST00000180247 107 ntBASIC1.23□□□□□ -2.21
Sec61a2Q9JLR1 Gm27415-201ENSMUST00000183720 95 ntBASIC1.23□□□□□ -2.21
Sec61a2Q9JLR1 Gm27420-201ENSMUST00000183823 79 ntBASIC1.23□□□□□ -2.21
Sec61a2Q9JLR1 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.23□□□□□ -2.21
Sec61a2Q9JLR1 Gm24988-201ENSMUST00000104460 121 ntBASIC1.22□□□□□ -2.21
Sec61a2Q9JLR1 Gm22030-201ENSMUST00000116942 63 ntBASIC1.22□□□□□ -2.21
Sec61a2Q9JLR1 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.22□□□□□ -2.21
Sec61a2Q9JLR1 Gm23339-201ENSMUST00000158962 139 ntBASIC1.22□□□□□ -2.21
Sec61a2Q9JLR1 Gm24064-201ENSMUST00000157486 106 ntBASIC1.21□□□□□ -2.22
Sec61a2Q9JLR1 Snord13-201ENSMUST00000157627 104 ntBASIC1.21□□□□□ -2.22
Sec61a2Q9JLR1 Gm24073-201ENSMUST00000158177 106 ntBASIC1.21□□□□□ -2.22
Sec61a2Q9JLR1 Gm22522-201ENSMUST00000158271 151 ntBASIC1.21□□□□□ -2.22
Sec61a2Q9JLR1 Gm27987-201ENSMUST00000184023 93 ntBASIC1.21□□□□□ -2.22
Sec61a2Q9JLR1 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.21□□□□□ -2.22
Sec61a2Q9JLR1 Gm23293-201ENSMUST00000082552 104 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 162.4 ms