Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Mir1933-201ENSMUST00000158930 88 ntBASIC1,53□□□□□ -2,16
Upf1Q9EPU0 Gm27265-201ENSMUST00000183559 77 ntBASIC1,53□□□□□ -2,16
Upf1Q9EPU0 Gm36956-201ENSMUST00000193830 214 ntBASIC1,53□□□□□ -2,16
Upf1Q9EPU0 Gm44469-201ENSMUST00000198558 79 ntBASIC1,53□□□□□ -2,16
Upf1Q9EPU0 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1,53□□□□□ -2,16
Upf1Q9EPU0 Gm25851-201ENSMUST00000082794 107 ntBASIC1,53□□□□□ -2,16
Upf1Q9EPU0 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1,53□□□□□ -2,16
Upf1Q9EPU0 Gm27248-201ENSMUST00000184004 166 ntBASIC1,52□□□□□ -2,17
Upf1Q9EPU0 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1,52□□□□□ -2,17
Upf1Q9EPU0 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1,52□□□□□ -2,17
Upf1Q9EPU0 AC160962.3-201ENSMUST00000225914 112 ntBASIC1,52□□□□□ -2,17
Upf1Q9EPU0 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1,52□□□□□ -2,17
Upf1Q9EPU0 Gm25110-201ENSMUST00000116684 121 ntBASIC1,51□□□□□ -2,17
Upf1Q9EPU0 Gm25775-201ENSMUST00000116716 121 ntBASIC1,51□□□□□ -2,17
Upf1Q9EPU0 Gm24795-201ENSMUST00000116737 121 ntBASIC1,51□□□□□ -2,17
Upf1Q9EPU0 Gm25171-201ENSMUST00000116926 121 ntBASIC1,51□□□□□ -2,17
Upf1Q9EPU0 Gm22431-201ENSMUST00000158545 107 ntBASIC1,51□□□□□ -2,17
Upf1Q9EPU0 Gm10548-202ENSMUST00000165672 272 ntBASIC1,51□□□□□ -2,17
Upf1Q9EPU0 Gm22862-201ENSMUST00000178593 121 ntBASIC1,51□□□□□ -2,17
Upf1Q9EPU0 Gm38323-201ENSMUST00000192450 210 ntBASIC1,51□□□□□ -2,17
Upf1Q9EPU0 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC1,51□□□□□ -2,17
Upf1Q9EPU0 Gm43885-201ENSMUST00000204928 2542 ntBASIC1,5□□□□□ -2,17
Upf1Q9EPU0 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1,5□□□□□ -2,17
Upf1Q9EPU0 Gm12469-201ENSMUST00000117623 207 ntBASIC1,5□□□□□ -2,17
Upf1Q9EPU0 Gm26369-201ENSMUST00000157825 100 ntBASIC1,5□□□□□ -2,17
Upf1Q9EPU0 Gm22515-201ENSMUST00000158273 305 ntBASIC1,5□□□□□ -2,17
Upf1Q9EPU0 Gm24129-201ENSMUST00000158537 97 ntBASIC1,5□□□□□ -2,17
Upf1Q9EPU0 Gm22503-201ENSMUST00000158983 115 ntBASIC1,5□□□□□ -2,17
Upf1Q9EPU0 Gm25618-201ENSMUST00000179484 107 ntBASIC1,5□□□□□ -2,17
Upf1Q9EPU0 Gm27993-201ENSMUST00000184362 85 ntBASIC1,5□□□□□ -2,17
Upf1Q9EPU0 Gm26062-201ENSMUST00000083379 107 ntBASIC1,5□□□□□ -2,17
Upf1Q9EPU0 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1,49□□□□□ -2,17
Upf1Q9EPU0 Mir764-201ENSMUST00000103259 108 ntBASIC1,48□□□□□ -2,17
Upf1Q9EPU0 Gm22233-201ENSMUST00000157464 114 ntBASIC1,48□□□□□ -2,17
Upf1Q9EPU0 Gm25868-201ENSMUST00000158253 114 ntBASIC1,48□□□□□ -2,17
Upf1Q9EPU0 Mir6351-201ENSMUST00000183826 99 ntBASIC1,48□□□□□ -2,17
Upf1Q9EPU0 AC160550.1-201ENSMUST00000228659 181 ntBASIC1,48□□□□□ -2,17
Upf1Q9EPU0 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1,47□□□□□ -2,17
Upf1Q9EPU0 n-R5s157-201ENSMUST00000122543 121 ntBASIC1,47□□□□□ -2,17
Upf1Q9EPU0 Gm24467-201ENSMUST00000157887 126 ntBASIC1,47□□□□□ -2,17
Upf1Q9EPU0 Gm22706-201ENSMUST00000157907 112 ntBASIC1,47□□□□□ -2,17
Upf1Q9EPU0 Mir5124a-201ENSMUST00000175528 72 ntBASIC1,47□□□□□ -2,17
Upf1Q9EPU0 Mir6390-201ENSMUST00000184405 129 ntBASIC1,47□□□□□ -2,17
Upf1Q9EPU0 AC140930.2-201ENSMUST00000221803 109 ntBASIC1,47□□□□□ -2,17
Upf1Q9EPU0 Gm24311-201ENSMUST00000082570 104 ntBASIC1,47□□□□□ -2,17
Upf1Q9EPU0 Gm25968-201ENSMUST00000157167 100 ntBASIC1,46□□□□□ -2,18
Upf1Q9EPU0 Gm22753-201ENSMUST00000083657 107 ntBASIC1,46□□□□□ -2,18
Upf1Q9EPU0 Gm23344-201ENSMUST00000083818 68 ntBASIC1,46□□□□□ -2,18
Upf1Q9EPU0 Gm25992-201ENSMUST00000102437 109 ntBASIC1,45□□□□□ -2,18
Upf1Q9EPU0 Gm13577-201ENSMUST00000121365 205 ntBASIC1,45□□□□□ -2,18
Upf1Q9EPU0 Gm24772-201ENSMUST00000158507 110 ntBASIC1,45□□□□□ -2,18
Upf1Q9EPU0 Gm26202-201ENSMUST00000082910 65 ntBASIC1,45□□□□□ -2,18
Upf1Q9EPU0 Gm24099-201ENSMUST00000083384 107 ntBASIC1,45□□□□□ -2,18
Upf1Q9EPU0 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1,44□□□□□ -2,18
Upf1Q9EPU0 Snord69-201ENSMUST00000104024 80 ntBASIC1,44□□□□□ -2,18
Upf1Q9EPU0 Gm11857-201ENSMUST00000119817 324 ntBASIC1,44□□□□□ -2,18
Upf1Q9EPU0 Snord13-201ENSMUST00000157627 104 ntBASIC1,44□□□□□ -2,18
Upf1Q9EPU0 Gm25375-201ENSMUST00000158157 135 ntBASIC1,44□□□□□ -2,18
Upf1Q9EPU0 Gm43944-201ENSMUST00000205220 120 ntBASIC1,44□□□□□ -2,18
Upf1Q9EPU0 AC211878.4-201ENSMUST00000220970 262 ntBASIC1,44□□□□□ -2,18
Upf1Q9EPU0 Mir30a-201ENSMUST00000083471 71 ntBASIC1,44□□□□□ -2,18
Upf1Q9EPU0 Gm26109-201ENSMUST00000083970 70 ntBASIC1,44□□□□□ -2,18
Upf1Q9EPU0 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1,44□□□□□ -2,18
Upf1Q9EPU0 Gm26133-201ENSMUST00000157363 100 ntBASIC1,43□□□□□ -2,18
Upf1Q9EPU0 Gm23900-201ENSMUST00000157569 108 ntBASIC1,43□□□□□ -2,18
Upf1Q9EPU0 Gm26158-201ENSMUST00000158973 119 ntBASIC1,43□□□□□ -2,18
Upf1Q9EPU0 Gm44962-201ENSMUST00000206460 279 ntBASIC1,43□□□□□ -2,18
Upf1Q9EPU0 Mir500-201ENSMUST00000093600 92 ntBASIC1,43□□□□□ -2,18
Upf1Q9EPU0 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1,42□□□□□ -2,18
Upf1Q9EPU0 Gm14884-201ENSMUST00000120456 196 ntBASIC1,42□□□□□ -2,18
Upf1Q9EPU0 Gm25393-201ENSMUST00000157336 285 ntBASIC1,42□□□□□ -2,18
Upf1Q9EPU0 Gm23221-201ENSMUST00000158118 93 ntBASIC1,42□□□□□ -2,18
Upf1Q9EPU0 Gm23065-201ENSMUST00000158236 130 ntBASIC1,42□□□□□ -2,18
Upf1Q9EPU0 Gm23857-201ENSMUST00000158379 111 ntBASIC1,42□□□□□ -2,18
Upf1Q9EPU0 Gm25014-201ENSMUST00000158401 103 ntBASIC1,42□□□□□ -2,18
Upf1Q9EPU0 Gm27419-201ENSMUST00000184576 109 ntBASIC1,42□□□□□ -2,18
Upf1Q9EPU0 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1,42□□□□□ -2,18
Upf1Q9EPU0 Gm25899-201ENSMUST00000082672 141 ntBASIC1,42□□□□□ -2,18
Upf1Q9EPU0 Gm23245-201ENSMUST00000083370 135 ntBASIC1,42□□□□□ -2,18
Upf1Q9EPU0 Mir27b-201ENSMUST00000083541 73 ntBASIC1,42□□□□□ -2,18
Upf1Q9EPU0 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1,42□□□□□ -2,18
Upf1Q9EPU0 Gm25337-201ENSMUST00000083723 104 ntBASIC1,42□□□□□ -2,18
Upf1Q9EPU0 Mir450b-201ENSMUST00000102095 82 ntBASIC1,41□□□□□ -2,18
Upf1Q9EPU0 Mir669f-201ENSMUST00000103850 121 ntBASIC1,41□□□□□ -2,18
Upf1Q9EPU0 Gm11694-201ENSMUST00000118637 159 ntBASIC1,41□□□□□ -2,18
Upf1Q9EPU0 Gm23321-201ENSMUST00000104465 126 ntBASIC1,4□□□□□ -2,19
Upf1Q9EPU0 Gm22466-201ENSMUST00000175278 69 ntBASIC1,4□□□□□ -2,19
Upf1Q9EPU0 Gm44488-201ENSMUST00000199467 119 ntBASIC1,4□□□□□ -2,19
Upf1Q9EPU0 AC166341.8-201ENSMUST00000221267 108 ntBASIC1,4□□□□□ -2,19
Upf1Q9EPU0 mt-Tc-201ENSMUST00000082400 66 ntBASIC1,4□□□□□ -2,19
Upf1Q9EPU0 Mir211-201ENSMUST00000083651 106 ntBASIC1,4□□□□□ -2,19
Upf1Q9EPU0 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1,39□□□□□ -2,19
Upf1Q9EPU0 Gm22845-201ENSMUST00000157712 104 ntBASIC1,39□□□□□ -2,19
Upf1Q9EPU0 Gm23180-201ENSMUST00000158686 125 ntBASIC1,39□□□□□ -2,19
Upf1Q9EPU0 Gm24801-201ENSMUST00000178503 105 ntBASIC1,39□□□□□ -2,19
Upf1Q9EPU0 Gm25633-201ENSMUST00000178565 107 ntBASIC1,39□□□□□ -2,19
Upf1Q9EPU0 Gm22663-201ENSMUST00000158721 102 ntBASIC1,38□□□□□ -2,19
Upf1Q9EPU0 Gm24221-201ENSMUST00000158833 313 ntBASIC1,38□□□□□ -2,19
Upf1Q9EPU0 Gm23917-201ENSMUST00000175256 98 ntBASIC1,38□□□□□ -2,19
Upf1Q9EPU0 Mir3083-201ENSMUST00000175377 64 ntBASIC1,38□□□□□ -2,19
Retrieved 100 of 76,532 protein–RNA pairs in 11,7 ms