Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm23605-201ENSMUST00000157255 127 ntBASIC0.49□□□□□ -2.33
Ddx56Q9D0R4 Gm23350-201ENSMUST00000158429 103 ntBASIC0.49□□□□□ -2.33
Ddx56Q9D0R4 Gm22239-201ENSMUST00000175220 103 ntBASIC0.49□□□□□ -2.33
Ddx56Q9D0R4 Gm44458-201ENSMUST00000196594 143 ntBASIC0.49□□□□□ -2.33
Ddx56Q9D0R4 Gm26062-201ENSMUST00000083379 107 ntBASIC0.49□□□□□ -2.33
Ddx56Q9D0R4 Mir10b-201ENSMUST00000083566 68 ntBASIC0.49□□□□□ -2.33
Ddx56Q9D0R4 Gm25056-201ENSMUST00000157372 62 ntBASIC0.48□□□□□ -2.33
Ddx56Q9D0R4 Gm22842-201ENSMUST00000157709 118 ntBASIC0.48□□□□□ -2.33
Ddx56Q9D0R4 Gm22788-201ENSMUST00000157876 61 ntBASIC0.48□□□□□ -2.33
Ddx56Q9D0R4 Gm43432-201ENSMUST00000196352 121 ntBASIC0.48□□□□□ -2.33
Ddx56Q9D0R4 Gm26133-201ENSMUST00000157363 100 ntBASIC0.47□□□□□ -2.33
Ddx56Q9D0R4 Gm22149-201ENSMUST00000104442 136 ntBASIC0.46□□□□□ -2.34
Ddx56Q9D0R4 Gm22089-201ENSMUST00000158336 102 ntBASIC0.46□□□□□ -2.34
Ddx56Q9D0R4 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.46□□□□□ -2.34
Ddx56Q9D0R4 Mir3105-201ENSMUST00000175480 85 ntBASIC0.46□□□□□ -2.34
Ddx56Q9D0R4 Gm26303-201ENSMUST00000116845 119 ntBASIC0.45□□□□□ -2.34
Ddx56Q9D0R4 Gm13577-201ENSMUST00000121365 205 ntBASIC0.45□□□□□ -2.34
Ddx56Q9D0R4 Gm23900-201ENSMUST00000157569 108 ntBASIC0.45□□□□□ -2.34
Ddx56Q9D0R4 Gm22303-201ENSMUST00000082686 122 ntBASIC0.45□□□□□ -2.34
Ddx56Q9D0R4 Gm24524-201ENSMUST00000082925 170 ntBASIC0.45□□□□□ -2.34
Ddx56Q9D0R4 Gm24258-201ENSMUST00000083739 133 ntBASIC0.45□□□□□ -2.34
Ddx56Q9D0R4 Gm22759-201ENSMUST00000102276 96 ntBASIC0.44□□□□□ -2.34
Ddx56Q9D0R4 Mir670-201ENSMUST00000102380 100 ntBASIC0.44□□□□□ -2.34
Ddx56Q9D0R4 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Ddx56Q9D0R4 Gm23482-201ENSMUST00000104172 122 ntBASIC0.44□□□□□ -2.34
Ddx56Q9D0R4 Gm22384-201ENSMUST00000158187 104 ntBASIC0.44□□□□□ -2.34
Ddx56Q9D0R4 Gm25978-201ENSMUST00000158698 90 ntBASIC0.44□□□□□ -2.34
Ddx56Q9D0R4 Gm23008-201ENSMUST00000158946 80 ntBASIC0.44□□□□□ -2.34
Ddx56Q9D0R4 Mir8116-201ENSMUST00000184134 97 ntBASIC0.44□□□□□ -2.34
Ddx56Q9D0R4 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Ddx56Q9D0R4 Mir344-201ENSMUST00000083634 95 ntBASIC0.44□□□□□ -2.34
Ddx56Q9D0R4 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Ddx56Q9D0R4 Mir216b-201ENSMUST00000102363 86 ntBASIC0.43□□□□□ -2.34
Ddx56Q9D0R4 Gm23654-201ENSMUST00000116758 126 ntBASIC0.43□□□□□ -2.34
Ddx56Q9D0R4 Gm22706-201ENSMUST00000157907 112 ntBASIC0.43□□□□□ -2.34
Ddx56Q9D0R4 Gm25899-201ENSMUST00000082672 141 ntBASIC0.43□□□□□ -2.34
Ddx56Q9D0R4 Gm23672-201ENSMUST00000157471 107 ntBASIC0.42□□□□□ -2.34
Ddx56Q9D0R4 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.42□□□□□ -2.34
Ddx56Q9D0R4 Gm23708-201ENSMUST00000104367 123 ntBASIC0.41□□□□□ -2.34
Ddx56Q9D0R4 Gm23321-201ENSMUST00000104465 126 ntBASIC0.41□□□□□ -2.34
Ddx56Q9D0R4 Gm26369-201ENSMUST00000157825 100 ntBASIC0.41□□□□□ -2.34
Ddx56Q9D0R4 Gm23351-201ENSMUST00000158427 125 ntBASIC0.41□□□□□ -2.34
Ddx56Q9D0R4 Gm26285-201ENSMUST00000177923 107 ntBASIC0.41□□□□□ -2.34
Ddx56Q9D0R4 Gm27475-201ENSMUST00000183420 61 ntBASIC0.41□□□□□ -2.34
Ddx56Q9D0R4 Mir7065-201ENSMUST00000185110 61 ntBASIC0.41□□□□□ -2.34
Ddx56Q9D0R4 Gm45429-201ENSMUST00000209527 172 ntBASIC0.41□□□□□ -2.34
Ddx56Q9D0R4 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.41□□□□□ -2.34
Ddx56Q9D0R4 Gm23622-201ENSMUST00000082460 107 ntBASIC0.41□□□□□ -2.34
Ddx56Q9D0R4 Gm24208-201ENSMUST00000082783 135 ntBASIC0.41□□□□□ -2.34
Ddx56Q9D0R4 Gm22772-201ENSMUST00000104451 121 ntBASIC0.4□□□□□ -2.35
Ddx56Q9D0R4 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.4□□□□□ -2.35
Ddx56Q9D0R4 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.4□□□□□ -2.35
Ddx56Q9D0R4 Gm25618-201ENSMUST00000179484 107 ntBASIC0.4□□□□□ -2.35
Ddx56Q9D0R4 Scarna8-201ENSMUST00000158333 131 ntBASIC0.39□□□□□ -2.35
Ddx56Q9D0R4 Gm23384-201ENSMUST00000158593 103 ntBASIC0.39□□□□□ -2.35
Ddx56Q9D0R4 Gm25408-201ENSMUST00000104104 133 ntBASIC0.38□□□□□ -2.35
Ddx56Q9D0R4 Gm22212-201ENSMUST00000158096 106 ntBASIC0.38□□□□□ -2.35
Ddx56Q9D0R4 Gm25014-201ENSMUST00000158401 103 ntBASIC0.38□□□□□ -2.35
Ddx56Q9D0R4 Gm26116-201ENSMUST00000175600 77 ntBASIC0.37□□□□□ -2.35
Ddx56Q9D0R4 Gm25915-201ENSMUST00000104265 126 ntBASIC0.36□□□□□ -2.35
Ddx56Q9D0R4 Gm44828-201ENSMUST00000203745 106 ntBASIC0.36□□□□□ -2.35
Ddx56Q9D0R4 Gm45197-201ENSMUST00000205288 151 ntBASIC0.36□□□□□ -2.35
Ddx56Q9D0R4 Gm23344-201ENSMUST00000083818 68 ntBASIC0.36□□□□□ -2.35
Ddx56Q9D0R4 Gm24342-201ENSMUST00000103907 104 ntBASIC0.35□□□□□ -2.35
Ddx56Q9D0R4 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.35□□□□□ -2.35
Ddx56Q9D0R4 Gm24648-201ENSMUST00000157111 132 ntBASIC0.34□□□□□ -2.36
Ddx56Q9D0R4 Gm22503-201ENSMUST00000158983 115 ntBASIC0.34□□□□□ -2.36
Ddx56Q9D0R4 Gm28270-201ENSMUST00000188550 109 ntBASIC0.34□□□□□ -2.36
Ddx56Q9D0R4 Gm28328-201ENSMUST00000188869 109 ntBASIC0.34□□□□□ -2.36
Ddx56Q9D0R4 Gm25887-201ENSMUST00000157777 84 ntBASIC0.33□□□□□ -2.36
Ddx56Q9D0R4 Gm22100-201ENSMUST00000157926 63 ntBASIC0.33□□□□□ -2.36
Ddx56Q9D0R4 Gm24073-201ENSMUST00000158177 106 ntBASIC0.33□□□□□ -2.36
Ddx56Q9D0R4 Gm23507-201ENSMUST00000083078 107 ntBASIC0.33□□□□□ -2.36
Ddx56Q9D0R4 Gm23969-201ENSMUST00000083324 74 ntBASIC0.33□□□□□ -2.36
Ddx56Q9D0R4 Gm38295-201ENSMUST00000191951 151 ntBASIC0.32□□□□□ -2.36
Ddx56Q9D0R4 Gm26152-201ENSMUST00000157427 101 ntBASIC0.31□□□□□ -2.36
Ddx56Q9D0R4 Gm43324-201ENSMUST00000197482 289 ntBASIC0.31□□□□□ -2.36
Ddx56Q9D0R4 Gm44327-201ENSMUST00000200068 117 ntBASIC0.31□□□□□ -2.36
Ddx56Q9D0R4 Snord80-201ENSMUST00000083801 81 ntBASIC0.31□□□□□ -2.36
Ddx56Q9D0R4 Gm24833-201ENSMUST00000116775 120 ntBASIC0.3□□□□□ -2.36
Ddx56Q9D0R4 Gm24399-201ENSMUST00000157869 74 ntBASIC0.3□□□□□ -2.36
Ddx56Q9D0R4 Gm23065-201ENSMUST00000158236 130 ntBASIC0.3□□□□□ -2.36
Ddx56Q9D0R4 Mir3108-201ENSMUST00000175500 79 ntBASIC0.3□□□□□ -2.36
Ddx56Q9D0R4 Gm22509-201ENSMUST00000082775 107 ntBASIC0.3□□□□□ -2.36
Ddx56Q9D0R4 Gm12086-201ENSMUST00000120863 228 ntBASIC0.29□□□□□ -2.36
Ddx56Q9D0R4 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
Ddx56Q9D0R4 Gm44345-201ENSMUST00000199560 135 ntBASIC0.29□□□□□ -2.36
Ddx56Q9D0R4 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.29□□□□□ -2.36
Ddx56Q9D0R4 Mir219b-201ENSMUST00000198317 65 ntBASIC0.28□□□□□ -2.36
Ddx56Q9D0R4 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.28□□□□□ -2.36
Ddx56Q9D0R4 Mir6365-201ENSMUST00000183990 101 ntBASIC0.27□□□□□ -2.37
Ddx56Q9D0R4 Gm43907-201ENSMUST00000203128 117 ntBASIC0.27□□□□□ -2.37
Ddx56Q9D0R4 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.27□□□□□ -2.37
Ddx56Q9D0R4 Snord78-201ENSMUST00000104032 66 ntBASIC0.26□□□□□ -2.37
Ddx56Q9D0R4 Gm23126-201ENSMUST00000104260 134 ntBASIC0.26□□□□□ -2.37
Ddx56Q9D0R4 Gm24947-201ENSMUST00000158334 110 ntBASIC0.26□□□□□ -2.37
Ddx56Q9D0R4 Gm25366-201ENSMUST00000158845 124 ntBASIC0.26□□□□□ -2.37
Ddx56Q9D0R4 Gm24926-201ENSMUST00000178053 79 ntBASIC0.26□□□□□ -2.37
Ddx56Q9D0R4 Gm22632-201ENSMUST00000178266 79 ntBASIC0.26□□□□□ -2.37
Ddx56Q9D0R4 Mir200b-201ENSMUST00000083615 70 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 190.8 ms