Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Mir3096-201ENSMUST00000116685 71 ntBASIC1,77□□□□□ -2,13
Trim13Q9CYB0 Gm3788-201ENSMUST00000119949 136 ntBASIC1,77□□□□□ -2,13
Trim13Q9CYB0 Gm23172-201ENSMUST00000157160 124 ntBASIC1,77□□□□□ -2,13
Trim13Q9CYB0 Gm24129-201ENSMUST00000158537 97 ntBASIC1,77□□□□□ -2,13
Trim13Q9CYB0 Gm26158-201ENSMUST00000158973 119 ntBASIC1,77□□□□□ -2,13
Trim13Q9CYB0 Gm27297-201ENSMUST00000183395 105 ntBASIC1,77□□□□□ -2,13
Trim13Q9CYB0 Gm37824-201ENSMUST00000193430 3236 ntBASIC1,77□□□□□ -2,13
Trim13Q9CYB0 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1,77□□□□□ -2,13
Trim13Q9CYB0 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1,76□□□□□ -2,13
Trim13Q9CYB0 Gm24098-201ENSMUST00000102075 109 ntBASIC1,76□□□□□ -2,13
Trim13Q9CYB0 Gm25381-201ENSMUST00000102078 109 ntBASIC1,76□□□□□ -2,13
Trim13Q9CYB0 Gm25974-201ENSMUST00000158701 94 ntBASIC1,76□□□□□ -2,13
Trim13Q9CYB0 Gm24154-201ENSMUST00000175261 130 ntBASIC1,76□□□□□ -2,13
Trim13Q9CYB0 Mir5104-201ENSMUST00000175319 94 ntBASIC1,76□□□□□ -2,13
Trim13Q9CYB0 Gm27517-201ENSMUST00000184347 236 ntBASIC1,76□□□□□ -2,13
Trim13Q9CYB0 Gm28862-201ENSMUST00000188246 163 ntBASIC1,76□□□□□ -2,13
Trim13Q9CYB0 Mir15b-201ENSMUST00000083646 64 ntBASIC1,76□□□□□ -2,13
Trim13Q9CYB0 Mir876-201ENSMUST00000104659 81 ntBASIC1,75□□□□□ -2,13
Trim13Q9CYB0 Gm37579-201ENSMUST00000194291 142 ntBASIC1,75□□□□□ -2,13
Trim13Q9CYB0 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1,75□□□□□ -2,13
Trim13Q9CYB0 AC144671.1-201ENSMUST00000215265 99 ntBASIC1,75□□□□□ -2,13
Trim13Q9CYB0 Gm24208-201ENSMUST00000082783 135 ntBASIC1,75□□□□□ -2,13
Trim13Q9CYB0 Gm23100-201ENSMUST00000083455 141 ntBASIC1,75□□□□□ -2,13
Trim13Q9CYB0 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1,75□□□□□ -2,13
Trim13Q9CYB0 Mir487b-201ENSMUST00000102265 82 ntBASIC1,74□□□□□ -2,13
Trim13Q9CYB0 Gm15536-201ENSMUST00000121411 114 ntBASIC1,74□□□□□ -2,13
Trim13Q9CYB0 Gm25056-201ENSMUST00000157372 62 ntBASIC1,74□□□□□ -2,13
Trim13Q9CYB0 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1,74□□□□□ -2,13
Trim13Q9CYB0 Gm22401-201ENSMUST00000174927 117 ntBASIC1,74□□□□□ -2,13
Trim13Q9CYB0 Gm22914-201ENSMUST00000175195 77 ntBASIC1,74□□□□□ -2,13
Trim13Q9CYB0 Gm23291-201ENSMUST00000175611 78 ntBASIC1,74□□□□□ -2,13
Trim13Q9CYB0 Gm45754-201ENSMUST00000212380 279 ntBASIC1,74□□□□□ -2,13
Trim13Q9CYB0 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1,74□□□□□ -2,13
Trim13Q9CYB0 Gm23951-201ENSMUST00000104029 132 ntBASIC1,73□□□□□ -2,13
Trim13Q9CYB0 Gm25600-201ENSMUST00000158357 106 ntBASIC1,73□□□□□ -2,13
Trim13Q9CYB0 Gm22403-201ENSMUST00000174919 84 ntBASIC1,73□□□□□ -2,13
Trim13Q9CYB0 Gm25648-201ENSMUST00000177844 79 ntBASIC1,73□□□□□ -2,13
Trim13Q9CYB0 Gm27549-201ENSMUST00000183508 62 ntBASIC1,73□□□□□ -2,13
Trim13Q9CYB0 Gm44469-201ENSMUST00000198558 79 ntBASIC1,73□□□□□ -2,13
Trim13Q9CYB0 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1,72□□□□□ -2,13
Trim13Q9CYB0 Gm24478-201ENSMUST00000157439 158 ntBASIC1,72□□□□□ -2,13
Trim13Q9CYB0 Gm27443-201ENSMUST00000184660 98 ntBASIC1,72□□□□□ -2,13
Trim13Q9CYB0 Gm27959-201ENSMUST00000185172 111 ntBASIC1,72□□□□□ -2,13
Trim13Q9CYB0 Mir7021-201ENSMUST00000197026 63 ntBASIC1,72□□□□□ -2,13
Trim13Q9CYB0 Gm24983-201ENSMUST00000104457 69 ntBASIC1,71□□□□□ -2,14
Trim13Q9CYB0 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1,71□□□□□ -2,14
Trim13Q9CYB0 Gm24677-201ENSMUST00000158755 150 ntBASIC1,71□□□□□ -2,14
Trim13Q9CYB0 Gm10548-202ENSMUST00000165672 272 ntBASIC1,71□□□□□ -2,14
Trim13Q9CYB0 Mir3061-201ENSMUST00000175129 91 ntBASIC1,71□□□□□ -2,14
Trim13Q9CYB0 CT485608.2-201ENSMUST00000227210 291 ntBASIC1,71□□□□□ -2,14
Trim13Q9CYB0 Gm25636-201ENSMUST00000082666 133 ntBASIC1,71□□□□□ -2,14
Trim13Q9CYB0 Mir222-201ENSMUST00000083537 79 ntBASIC1,71□□□□□ -2,14
Trim13Q9CYB0 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1,7□□□□□ -2,14
Trim13Q9CYB0 Mir873a-201ENSMUST00000104863 77 ntBASIC1,7□□□□□ -2,14
Trim13Q9CYB0 n-R5s63-201ENSMUST00000122756 103 ntBASIC1,7□□□□□ -2,14
Trim13Q9CYB0 Gm23857-201ENSMUST00000158379 111 ntBASIC1,7□□□□□ -2,14
Trim13Q9CYB0 Gm25366-201ENSMUST00000158845 124 ntBASIC1,7□□□□□ -2,14
Trim13Q9CYB0 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1,7□□□□□ -2,14
Trim13Q9CYB0 Mir216b-201ENSMUST00000102363 86 ntBASIC1,69□□□□□ -2,14
Trim13Q9CYB0 Gm22666-201ENSMUST00000158717 164 ntBASIC1,69□□□□□ -2,14
Trim13Q9CYB0 Gm37778-201ENSMUST00000191732 190 ntBASIC1,69□□□□□ -2,14
Trim13Q9CYB0 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1,69□□□□□ -2,14
Trim13Q9CYB0 Mir223-201ENSMUST00000102112 110 ntBASIC1,68□□□□□ -2,14
Trim13Q9CYB0 Gm25423-201ENSMUST00000157609 107 ntBASIC1,68□□□□□ -2,14
Trim13Q9CYB0 Gm22406-201ENSMUST00000174923 93 ntBASIC1,68□□□□□ -2,14
Trim13Q9CYB0 Gm25035-201ENSMUST00000175414 77 ntBASIC1,68□□□□□ -2,14
Trim13Q9CYB0 Mir7050-201ENSMUST00000184636 60 ntBASIC1,68□□□□□ -2,14
Trim13Q9CYB0 Mir6901-201ENSMUST00000185062 62 ntBASIC1,68□□□□□ -2,14
Trim13Q9CYB0 Gm27554-201ENSMUST00000185074 98 ntBASIC1,68□□□□□ -2,14
Trim13Q9CYB0 Mir322-201ENSMUST00000083484 95 ntBASIC1,68□□□□□ -2,14
Trim13Q9CYB0 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1,68□□□□□ -2,14
Trim13Q9CYB0 Gm22203-201ENSMUST00000158605 58 ntBASIC1,67□□□□□ -2,14
Trim13Q9CYB0 Gm24222-201ENSMUST00000158834 93 ntBASIC1,67□□□□□ -2,14
Trim13Q9CYB0 Gm43907-201ENSMUST00000203128 117 ntBASIC1,67□□□□□ -2,14
Trim13Q9CYB0 AC116319.1-201ENSMUST00000227765 222 ntBASIC1,67□□□□□ -2,14
Trim13Q9CYB0 Snora75-201ENSMUST00000082903 133 ntBASIC1,67□□□□□ -2,14
Trim13Q9CYB0 Gm23730-201ENSMUST00000083236 107 ntBASIC1,67□□□□□ -2,14
Trim13Q9CYB0 Gm24915-201ENSMUST00000157288 78 ntBASIC1,66□□□□□ -2,14
Trim13Q9CYB0 Gm23500-201ENSMUST00000157735 98 ntBASIC1,66□□□□□ -2,14
Trim13Q9CYB0 Snord14a-201ENSMUST00000082807 87 ntBASIC1,66□□□□□ -2,14
Trim13Q9CYB0 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1,65□□□□□ -2,15
Trim13Q9CYB0 Gm22788-201ENSMUST00000157876 61 ntBASIC1,65□□□□□ -2,15
Trim13Q9CYB0 Gm22386-201ENSMUST00000158192 129 ntBASIC1,65□□□□□ -2,15
Trim13Q9CYB0 Gm25958-201ENSMUST00000175114 71 ntBASIC1,65□□□□□ -2,15
Trim13Q9CYB0 Gm22802-201ENSMUST00000175621 89 ntBASIC1,65□□□□□ -2,15
Trim13Q9CYB0 Gm22264-201ENSMUST00000178200 107 ntBASIC1,65□□□□□ -2,15
Trim13Q9CYB0 Mir7226-201ENSMUST00000184953 60 ntBASIC1,65□□□□□ -2,15
Trim13Q9CYB0 Gm24612-201ENSMUST00000083267 107 ntBASIC1,65□□□□□ -2,15
Trim13Q9CYB0 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1,65□□□□□ -2,15
Trim13Q9CYB0 n-R5s70-201ENSMUST00000122650 116 ntBASIC1,64□□□□□ -2,15
Trim13Q9CYB0 Gm22603-201ENSMUST00000157603 96 ntBASIC1,64□□□□□ -2,15
Trim13Q9CYB0 Gm26089-201ENSMUST00000157898 107 ntBASIC1,64□□□□□ -2,15
Trim13Q9CYB0 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1,64□□□□□ -2,15
Trim13Q9CYB0 Gm24580-201ENSMUST00000103965 131 ntBASIC1,63□□□□□ -2,15
Trim13Q9CYB0 Gm24476-201ENSMUST00000157437 131 ntBASIC1,63□□□□□ -2,15
Trim13Q9CYB0 Gm25886-201ENSMUST00000157780 114 ntBASIC1,63□□□□□ -2,15
Trim13Q9CYB0 Gm22100-201ENSMUST00000157926 63 ntBASIC1,63□□□□□ -2,15
Trim13Q9CYB0 Gm22664-201ENSMUST00000158719 105 ntBASIC1,63□□□□□ -2,15
Trim13Q9CYB0 Gm27977-201ENSMUST00000185159 111 ntBASIC1,63□□□□□ -2,15
Trim13Q9CYB0 Gm45655-201ENSMUST00000211625 160 ntBASIC1,63□□□□□ -2,15
Retrieved 100 of 76,532 protein–RNA pairs in 92,5 ms