Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm25300-201ENSMUST00000175284 84 ntBASIC1.97□□□□□ -2.09
Trim11Q99PQ2 AC160976.1-201ENSMUST00000215092 148 ntBASIC1.97□□□□□ -2.09
Trim11Q99PQ2 Mir223-201ENSMUST00000102112 110 ntBASIC1.96□□□□□ -2.1
Trim11Q99PQ2 Gm23170-201ENSMUST00000157158 106 ntBASIC1.96□□□□□ -2.1
Trim11Q99PQ2 Gm24226-201ENSMUST00000158826 97 ntBASIC1.96□□□□□ -2.1
Trim11Q99PQ2 Gm22802-201ENSMUST00000175621 89 ntBASIC1.96□□□□□ -2.1
Trim11Q99PQ2 Gm22264-201ENSMUST00000178200 107 ntBASIC1.96□□□□□ -2.1
Trim11Q99PQ2 Mir6917-201ENSMUST00000184111 61 ntBASIC1.96□□□□□ -2.1
Trim11Q99PQ2 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Trim11Q99PQ2 Gm24701-201ENSMUST00000101946 105 ntBASIC1.95□□□□□ -2.1
Trim11Q99PQ2 Gm6985-201ENSMUST00000121255 271 ntBASIC1.95□□□□□ -2.1
Trim11Q99PQ2 Gm25600-201ENSMUST00000158357 106 ntBASIC1.95□□□□□ -2.1
Trim11Q99PQ2 Gm28862-201ENSMUST00000188246 163 ntBASIC1.95□□□□□ -2.1
Trim11Q99PQ2 Gm44384-201ENSMUST00000200208 114 ntBASIC1.95□□□□□ -2.1
Trim11Q99PQ2 Mir126a-201ENSMUST00000083606 73 ntBASIC1.95□□□□□ -2.1
Trim11Q99PQ2 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.95□□□□□ -2.1
Trim11Q99PQ2 Mir297-1-201ENSMUST00000103800 76 ntBASIC1.94□□□□□ -2.1
Trim11Q99PQ2 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.94□□□□□ -2.1
Trim11Q99PQ2 Gm10548-202ENSMUST00000165672 272 ntBASIC1.94□□□□□ -2.1
Trim11Q99PQ2 Gm25958-201ENSMUST00000175114 71 ntBASIC1.94□□□□□ -2.1
Trim11Q99PQ2 Gm25707-201ENSMUST00000175120 96 ntBASIC1.94□□□□□ -2.1
Trim11Q99PQ2 Mir6997-201ENSMUST00000184313 71 ntBASIC1.94□□□□□ -2.1
Trim11Q99PQ2 Gm27959-201ENSMUST00000185172 111 ntBASIC1.94□□□□□ -2.1
Trim11Q99PQ2 Gm24208-201ENSMUST00000082783 135 ntBASIC1.94□□□□□ -2.1
Trim11Q99PQ2 Gm23950-201ENSMUST00000104026 129 ntBASIC1.93□□□□□ -2.1
Trim11Q99PQ2 Gm24677-201ENSMUST00000158755 150 ntBASIC1.93□□□□□ -2.1
Trim11Q99PQ2 Gm23291-201ENSMUST00000175611 78 ntBASIC1.93□□□□□ -2.1
Trim11Q99PQ2 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Trim11Q99PQ2 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.93□□□□□ -2.1
Trim11Q99PQ2 Gm24165-201ENSMUST00000082718 128 ntBASIC1.93□□□□□ -2.1
Trim11Q99PQ2 Snord45b-201ENSMUST00000082797 71 ntBASIC1.93□□□□□ -2.1
Trim11Q99PQ2 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.93□□□□□ -2.1
Trim11Q99PQ2 Gm25279-201ENSMUST00000122608 133 ntBASIC1.92□□□□□ -2.1
Trim11Q99PQ2 Gm23857-201ENSMUST00000158379 111 ntBASIC1.92□□□□□ -2.1
Trim11Q99PQ2 Mir494-201ENSMUST00000093632 85 ntBASIC1.92□□□□□ -2.1
Trim11Q99PQ2 Gm6444-201ENSMUST00000119611 458 ntBASIC1.91□□□□□ -2.1
Trim11Q99PQ2 Gm22078-201ENSMUST00000157593 103 ntBASIC1.91□□□□□ -2.1
Trim11Q99PQ2 Gm24222-201ENSMUST00000158834 93 ntBASIC1.91□□□□□ -2.1
Trim11Q99PQ2 Gm23649-201ENSMUST00000179007 107 ntBASIC1.91□□□□□ -2.1
Trim11Q99PQ2 Gm24134-201ENSMUST00000083361 71 ntBASIC1.91□□□□□ -2.1
Trim11Q99PQ2 Gm25423-201ENSMUST00000157609 107 ntBASIC1.9□□□□□ -2.11
Trim11Q99PQ2 Gm22386-201ENSMUST00000158192 129 ntBASIC1.9□□□□□ -2.11
Trim11Q99PQ2 Gm24229-201ENSMUST00000158830 118 ntBASIC1.9□□□□□ -2.11
Trim11Q99PQ2 Mir7679-201ENSMUST00000183379 63 ntBASIC1.9□□□□□ -2.11
Trim11Q99PQ2 Gm23109-201ENSMUST00000116867 126 ntBASIC1.89□□□□□ -2.11
Trim11Q99PQ2 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.89□□□□□ -2.11
Trim11Q99PQ2 Gm22603-201ENSMUST00000157603 96 ntBASIC1.89□□□□□ -2.11
Trim11Q99PQ2 Gm25366-201ENSMUST00000158845 124 ntBASIC1.89□□□□□ -2.11
Trim11Q99PQ2 Gm23419-201ENSMUST00000175523 84 ntBASIC1.89□□□□□ -2.11
Trim11Q99PQ2 Mir7062-201ENSMUST00000185038 66 ntBASIC1.89□□□□□ -2.11
Trim11Q99PQ2 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim11Q99PQ2 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim11Q99PQ2 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.89□□□□□ -2.11
Trim11Q99PQ2 Mir741-201ENSMUST00000103931 71 ntBASIC1.88□□□□□ -2.11
Trim11Q99PQ2 Gm24915-201ENSMUST00000157288 78 ntBASIC1.88□□□□□ -2.11
Trim11Q99PQ2 Mir669n-201ENSMUST00000158636 54 ntBASIC1.88□□□□□ -2.11
Trim11Q99PQ2 Mir7226-201ENSMUST00000184953 60 ntBASIC1.88□□□□□ -2.11
Trim11Q99PQ2 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trim11Q99PQ2 Gm22809-201ENSMUST00000082743 156 ntBASIC1.88□□□□□ -2.11
Trim11Q99PQ2 Gm24201-201ENSMUST00000082946 125 ntBASIC1.88□□□□□ -2.11
Trim11Q99PQ2 Mir216b-201ENSMUST00000102363 86 ntBASIC1.87□□□□□ -2.11
Trim11Q99PQ2 Gm27450-201ENSMUST00000104632 90 ntBASIC1.87□□□□□ -2.11
Trim11Q99PQ2 Mir876-201ENSMUST00000104659 81 ntBASIC1.87□□□□□ -2.11
Trim11Q99PQ2 Gm23106-201ENSMUST00000157554 101 ntBASIC1.87□□□□□ -2.11
Trim11Q99PQ2 Gm25183-201ENSMUST00000157752 106 ntBASIC1.87□□□□□ -2.11
Trim11Q99PQ2 Gm22788-201ENSMUST00000157876 61 ntBASIC1.87□□□□□ -2.11
Trim11Q99PQ2 Gm26089-201ENSMUST00000157898 107 ntBASIC1.87□□□□□ -2.11
Trim11Q99PQ2 Gm24154-201ENSMUST00000175261 130 ntBASIC1.87□□□□□ -2.11
Trim11Q99PQ2 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.87□□□□□ -2.11
Trim11Q99PQ2 Gm24927-201ENSMUST00000083397 107 ntBASIC1.87□□□□□ -2.11
Trim11Q99PQ2 Gm25650-201ENSMUST00000083784 162 ntBASIC1.87□□□□□ -2.11
Trim11Q99PQ2 Gm24983-201ENSMUST00000104457 69 ntBASIC1.86□□□□□ -2.11
Trim11Q99PQ2 Gm26257-201ENSMUST00000122500 107 ntBASIC1.86□□□□□ -2.11
Trim11Q99PQ2 Gm24476-201ENSMUST00000157437 131 ntBASIC1.86□□□□□ -2.11
Trim11Q99PQ2 Mir3103-201ENSMUST00000175474 67 ntBASIC1.86□□□□□ -2.11
Trim11Q99PQ2 Gm22801-201ENSMUST00000175624 84 ntBASIC1.86□□□□□ -2.11
Trim11Q99PQ2 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trim11Q99PQ2 Mir6352-201ENSMUST00000184495 116 ntBASIC1.86□□□□□ -2.11
Trim11Q99PQ2 Gm28383-201ENSMUST00000187563 139 ntBASIC1.86□□□□□ -2.11
Trim11Q99PQ2 Gm36956-201ENSMUST00000193830 214 ntBASIC1.86□□□□□ -2.11
Trim11Q99PQ2 Gm43907-201ENSMUST00000203128 117 ntBASIC1.86□□□□□ -2.11
Trim11Q99PQ2 Snord14a-201ENSMUST00000082807 87 ntBASIC1.86□□□□□ -2.11
Trim11Q99PQ2 Mir758-201ENSMUST00000103260 81 ntBASIC1.85□□□□□ -2.11
Trim11Q99PQ2 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.85□□□□□ -2.11
Trim11Q99PQ2 Gm22100-201ENSMUST00000157926 63 ntBASIC1.85□□□□□ -2.11
Trim11Q99PQ2 Mir7675-201ENSMUST00000184262 58 ntBASIC1.85□□□□□ -2.11
Trim11Q99PQ2 Gm27993-201ENSMUST00000184362 85 ntBASIC1.85□□□□□ -2.11
Trim11Q99PQ2 Gm44948-201ENSMUST00000209050 149 ntBASIC1.85□□□□□ -2.11
Trim11Q99PQ2 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.85□□□□□ -2.11
Trim11Q99PQ2 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trim11Q99PQ2 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trim11Q99PQ2 Mir544-201ENSMUST00000103813 78 ntBASIC1.84□□□□□ -2.11
Trim11Q99PQ2 Gm22039-201ENSMUST00000157278 132 ntBASIC1.84□□□□□ -2.11
Trim11Q99PQ2 Gm26181-201ENSMUST00000157687 106 ntBASIC1.84□□□□□ -2.11
Trim11Q99PQ2 Gm22929-201ENSMUST00000175517 107 ntBASIC1.84□□□□□ -2.11
Trim11Q99PQ2 Gm27248-201ENSMUST00000184004 166 ntBASIC1.84□□□□□ -2.11
Trim11Q99PQ2 Snora75-201ENSMUST00000082903 133 ntBASIC1.84□□□□□ -2.11
Trim11Q99PQ2 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.84□□□□□ -2.12
Trim11Q99PQ2 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trim11Q99PQ2 Gm23951-201ENSMUST00000104029 132 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms