Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm24099-201ENSMUST00000083384 107 ntBASIC1.07□□□□□ -2.24
Pcdha3Q91Y16 Gm25629-201ENSMUST00000084001 107 ntBASIC1.07□□□□□ -2.24
Pcdha3Q91Y16 Gm26253-201ENSMUST00000122493 103 ntBASIC1.06□□□□□ -2.24
Pcdha3Q91Y16 Gm24650-201ENSMUST00000157105 103 ntBASIC1.06□□□□□ -2.24
Pcdha3Q91Y16 Gm25968-201ENSMUST00000157167 100 ntBASIC1.06□□□□□ -2.24
Pcdha3Q91Y16 Gm23857-201ENSMUST00000158379 111 ntBASIC1.06□□□□□ -2.24
Pcdha3Q91Y16 Mir3968-201ENSMUST00000175355 100 ntBASIC1.06□□□□□ -2.24
Pcdha3Q91Y16 Gm25618-201ENSMUST00000179484 107 ntBASIC1.06□□□□□ -2.24
Pcdha3Q91Y16 Gm43944-201ENSMUST00000205220 120 ntBASIC1.06□□□□□ -2.24
Pcdha3Q91Y16 AC140930.2-201ENSMUST00000221803 109 ntBASIC1.06□□□□□ -2.24
Pcdha3Q91Y16 Gm26062-201ENSMUST00000083379 107 ntBASIC1.06□□□□□ -2.24
Pcdha3Q91Y16 Mir410-201ENSMUST00000083563 81 ntBASIC1.06□□□□□ -2.24
Pcdha3Q91Y16 Gm23344-201ENSMUST00000083818 68 ntBASIC1.06□□□□□ -2.24
Pcdha3Q91Y16 Gm26109-201ENSMUST00000083970 70 ntBASIC1.06□□□□□ -2.24
Pcdha3Q91Y16 Gm11694-201ENSMUST00000118637 159 ntBASIC1.05□□□□□ -2.24
Pcdha3Q91Y16 Gm14884-201ENSMUST00000120456 196 ntBASIC1.05□□□□□ -2.24
Pcdha3Q91Y16 Gm24942-201ENSMUST00000158328 114 ntBASIC1.05□□□□□ -2.24
Pcdha3Q91Y16 Gm27993-201ENSMUST00000184362 85 ntBASIC1.05□□□□□ -2.24
Pcdha3Q91Y16 Gm38323-201ENSMUST00000192450 210 ntBASIC1.05□□□□□ -2.24
Pcdha3Q91Y16 Gm44602-201ENSMUST00000205948 132 ntBASIC1.05□□□□□ -2.24
Pcdha3Q91Y16 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.05□□□□□ -2.24
Pcdha3Q91Y16 Gm25683-201ENSMUST00000083940 131 ntBASIC1.05□□□□□ -2.24
Pcdha3Q91Y16 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.04□□□□□ -2.24
Pcdha3Q91Y16 Gm24129-201ENSMUST00000158537 97 ntBASIC1.04□□□□□ -2.24
Pcdha3Q91Y16 Gm25166-201ENSMUST00000158909 111 ntBASIC1.04□□□□□ -2.24
Pcdha3Q91Y16 Mir6380-201ENSMUST00000184334 81 ntBASIC1.04□□□□□ -2.24
Pcdha3Q91Y16 Gm25337-201ENSMUST00000083723 104 ntBASIC1.04□□□□□ -2.24
Pcdha3Q91Y16 Gm16265-201ENSMUST00000134558 108 ntBASIC1.03□□□□□ -2.24
Pcdha3Q91Y16 Gm26158-201ENSMUST00000158973 119 ntBASIC1.03□□□□□ -2.24
Pcdha3Q91Y16 Mir30a-201ENSMUST00000083471 71 ntBASIC1.03□□□□□ -2.24
Pcdha3Q91Y16 Mir196b-201ENSMUST00000083509 85 ntBASIC1.03□□□□□ -2.24
Pcdha3Q91Y16 Mir500-201ENSMUST00000093600 92 ntBASIC1.03□□□□□ -2.24
Pcdha3Q91Y16 Snord69-201ENSMUST00000104024 80 ntBASIC1.02□□□□□ -2.25
Pcdha3Q91Y16 Gm23482-201ENSMUST00000104172 122 ntBASIC1.02□□□□□ -2.25
Pcdha3Q91Y16 Gm22544-201ENSMUST00000104349 127 ntBASIC1.02□□□□□ -2.25
Pcdha3Q91Y16 Gm23900-201ENSMUST00000157569 108 ntBASIC1.02□□□□□ -2.25
Pcdha3Q91Y16 Gm25014-201ENSMUST00000158401 103 ntBASIC1.02□□□□□ -2.25
Pcdha3Q91Y16 Gm23917-201ENSMUST00000175256 98 ntBASIC1.02□□□□□ -2.25
Pcdha3Q91Y16 Gm22466-201ENSMUST00000175278 69 ntBASIC1.02□□□□□ -2.25
Pcdha3Q91Y16 Mir3083-201ENSMUST00000175377 64 ntBASIC1.02□□□□□ -2.25
Pcdha3Q91Y16 Mir1954-201ENSMUST00000175595 86 ntBASIC1.02□□□□□ -2.25
Pcdha3Q91Y16 Gm42533-201ENSMUST00000196247 157 ntBASIC1.02□□□□□ -2.25
Pcdha3Q91Y16 Gm24399-201ENSMUST00000157869 74 ntBASIC1.01□□□□□ -2.25
Pcdha3Q91Y16 Gm25600-201ENSMUST00000158357 106 ntBASIC1.01□□□□□ -2.25
Pcdha3Q91Y16 Mir8119-201ENSMUST00000183371 129 ntBASIC1.01□□□□□ -2.25
Pcdha3Q91Y16 Mir7052-201ENSMUST00000184821 65 ntBASIC1.01□□□□□ -2.25
Pcdha3Q91Y16 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.01□□□□□ -2.25
Pcdha3Q91Y16 Gm26202-201ENSMUST00000082910 65 ntBASIC1.01□□□□□ -2.25
Pcdha3Q91Y16 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
Pcdha3Q91Y16 Gm26133-201ENSMUST00000157363 100 ntBASIC1□□□□□ -2.25
Pcdha3Q91Y16 Gm23893-201ENSMUST00000158106 134 ntBASIC1□□□□□ -2.25
Pcdha3Q91Y16 Gm22770-201ENSMUST00000158368 67 ntBASIC1□□□□□ -2.25
Pcdha3Q91Y16 Gm24549-201ENSMUST00000158647 139 ntBASIC1□□□□□ -2.25
Pcdha3Q91Y16 Mir3079-201ENSMUST00000175428 90 ntBASIC1□□□□□ -2.25
Pcdha3Q91Y16 Gm45197-201ENSMUST00000205288 151 ntBASIC1□□□□□ -2.25
Pcdha3Q91Y16 AC116319.1-201ENSMUST00000227765 222 ntBASIC1□□□□□ -2.25
Pcdha3Q91Y16 AC132833.2-201ENSMUST00000228699 157 ntBASIC1□□□□□ -2.25
Pcdha3Q91Y16 Gm24527-201ENSMUST00000082920 107 ntBASIC1□□□□□ -2.25
Pcdha3Q91Y16 Gm24431-201ENSMUST00000104073 66 ntBASIC0.99□□□□□ -2.25
Pcdha3Q91Y16 Gm24020-201ENSMUST00000180156 108 ntBASIC0.99□□□□□ -2.25
Pcdha3Q91Y16 Mir6905-201ENSMUST00000184228 70 ntBASIC0.99□□□□□ -2.25
Pcdha3Q91Y16 Gm25635-201ENSMUST00000082675 131 ntBASIC0.99□□□□□ -2.25
Pcdha3Q91Y16 Gm23301-201ENSMUST00000082713 65 ntBASIC0.99□□□□□ -2.25
Pcdha3Q91Y16 Snord35a-201ENSMUST00000083884 90 ntBASIC0.99□□□□□ -2.25
Pcdha3Q91Y16 Gm26301-201ENSMUST00000104813 95 ntBASIC0.98□□□□□ -2.25
Pcdha3Q91Y16 Gm6272-201ENSMUST00000121256 171 ntBASIC0.98□□□□□ -2.25
Pcdha3Q91Y16 Gm23661-201ENSMUST00000122630 87 ntBASIC0.98□□□□□ -2.25
Pcdha3Q91Y16 Gm25289-201ENSMUST00000122799 119 ntBASIC0.98□□□□□ -2.25
Pcdha3Q91Y16 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.98□□□□□ -2.25
Pcdha3Q91Y16 Gm25974-201ENSMUST00000158701 94 ntBASIC0.98□□□□□ -2.25
Pcdha3Q91Y16 Gm25693-201ENSMUST00000175443 85 ntBASIC0.98□□□□□ -2.25
Pcdha3Q91Y16 Gm24801-201ENSMUST00000178503 105 ntBASIC0.98□□□□□ -2.25
Pcdha3Q91Y16 Gm22030-201ENSMUST00000116942 63 ntBASIC0.97□□□□□ -2.25
Pcdha3Q91Y16 Gm24290-201ENSMUST00000157634 96 ntBASIC0.97□□□□□ -2.25
Pcdha3Q91Y16 Gm22429-201ENSMUST00000158553 130 ntBASIC0.97□□□□□ -2.25
Pcdha3Q91Y16 Gm26466-201ENSMUST00000179615 79 ntBASIC0.97□□□□□ -2.25
Pcdha3Q91Y16 Mir6237-201ENSMUST00000183808 91 ntBASIC0.97□□□□□ -2.25
Pcdha3Q91Y16 mt-Tn-201ENSMUST00000082399 71 ntBASIC0.97□□□□□ -2.25
Pcdha3Q91Y16 Gm24624-201ENSMUST00000082617 164 ntBASIC0.97□□□□□ -2.25
Pcdha3Q91Y16 Mir27b-201ENSMUST00000083541 73 ntBASIC0.97□□□□□ -2.25
Pcdha3Q91Y16 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Pcdha3Q91Y16 Gm24009-201ENSMUST00000157734 93 ntBASIC0.96□□□□□ -2.26
Pcdha3Q91Y16 Gm22212-201ENSMUST00000158096 106 ntBASIC0.96□□□□□ -2.26
Pcdha3Q91Y16 Gm27297-201ENSMUST00000183395 105 ntBASIC0.96□□□□□ -2.26
Pcdha3Q91Y16 Gm23790-201ENSMUST00000083013 107 ntBASIC0.96□□□□□ -2.26
Pcdha3Q91Y16 Gm22672-201ENSMUST00000104414 134 ntBASIC0.95□□□□□ -2.26
Pcdha3Q91Y16 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.95□□□□□ -2.26
Pcdha3Q91Y16 Gm25715-201ENSMUST00000158627 125 ntBASIC0.95□□□□□ -2.26
Pcdha3Q91Y16 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.95□□□□□ -2.26
Pcdha3Q91Y16 Gm38274-201ENSMUST00000195689 148 ntBASIC0.95□□□□□ -2.26
Pcdha3Q91Y16 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.95□□□□□ -2.26
Pcdha3Q91Y16 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.94□□□□□ -2.26
Pcdha3Q91Y16 Gm22786-201ENSMUST00000104086 122 ntBASIC0.94□□□□□ -2.26
Pcdha3Q91Y16 Gm12432-201ENSMUST00000119540 186 ntBASIC0.94□□□□□ -2.26
Pcdha3Q91Y16 Gm23261-201ENSMUST00000158316 136 ntBASIC0.94□□□□□ -2.26
Pcdha3Q91Y16 Gm23853-201ENSMUST00000158375 104 ntBASIC0.94□□□□□ -2.26
Pcdha3Q91Y16 Mir15a-201ENSMUST00000175266 84 ntBASIC0.94□□□□□ -2.26
Pcdha3Q91Y16 Mir5619-201ENSMUST00000176065 61 ntBASIC0.94□□□□□ -2.26
Pcdha3Q91Y16 Gm27974-201ENSMUST00000183415 105 ntBASIC0.94□□□□□ -2.26
Pcdha3Q91Y16 Gm22541-201ENSMUST00000158165 127 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 162.6 ms