Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm25868-201ENSMUST00000158253 114 ntBASIC1.61□□□□□ -2.15
Rpa1Q8VEE4 Mir669n-201ENSMUST00000158636 54 ntBASIC1.61□□□□□ -2.15
Rpa1Q8VEE4 Gm24174-201ENSMUST00000158933 111 ntBASIC1.61□□□□□ -2.15
Rpa1Q8VEE4 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
Rpa1Q8VEE4 Gm23950-201ENSMUST00000104026 129 ntBASIC1.6□□□□□ -2.15
Rpa1Q8VEE4 Gm26478-201ENSMUST00000122611 133 ntBASIC1.6□□□□□ -2.15
Rpa1Q8VEE4 Gm25968-201ENSMUST00000157167 100 ntBASIC1.6□□□□□ -2.15
Rpa1Q8VEE4 Mir7050-201ENSMUST00000184636 60 ntBASIC1.6□□□□□ -2.15
Rpa1Q8VEE4 Gm25820-202ENSMUST00000197479 128 ntBASIC1.6□□□□□ -2.15
Rpa1Q8VEE4 Gm22723-201ENSMUST00000083820 129 ntBASIC1.6□□□□□ -2.15
Rpa1Q8VEE4 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.59□□□□□ -2.15
Rpa1Q8VEE4 Gm24384-201ENSMUST00000122693 75 ntBASIC1.59□□□□□ -2.15
Rpa1Q8VEE4 Gm28383-201ENSMUST00000187563 139 ntBASIC1.59□□□□□ -2.15
Rpa1Q8VEE4 Mir509-201ENSMUST00000196089 75 ntBASIC1.59□□□□□ -2.15
Rpa1Q8VEE4 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.59□□□□□ -2.15
Rpa1Q8VEE4 Gm44962-201ENSMUST00000206460 279 ntBASIC1.59□□□□□ -2.15
Rpa1Q8VEE4 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
Rpa1Q8VEE4 Mir500-201ENSMUST00000093600 92 ntBASIC1.59□□□□□ -2.15
Rpa1Q8VEE4 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.59□□□□□ -2.16
Rpa1Q8VEE4 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.58□□□□□ -2.16
Rpa1Q8VEE4 Gm22788-201ENSMUST00000157876 61 ntBASIC1.58□□□□□ -2.16
Rpa1Q8VEE4 Gm22732-201ENSMUST00000158093 121 ntBASIC1.58□□□□□ -2.16
Rpa1Q8VEE4 Gm3702-201ENSMUST00000211754 346 ntBASIC1.58□□□□□ -2.16
Rpa1Q8VEE4 Gm25696-201ENSMUST00000082900 105 ntBASIC1.58□□□□□ -2.16
Rpa1Q8VEE4 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
Rpa1Q8VEE4 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Rpa1Q8VEE4 Gm26181-201ENSMUST00000157687 106 ntBASIC1.57□□□□□ -2.16
Rpa1Q8VEE4 Mir6352-201ENSMUST00000184495 116 ntBASIC1.57□□□□□ -2.16
Rpa1Q8VEE4 Gm38295-201ENSMUST00000191951 151 ntBASIC1.57□□□□□ -2.16
Rpa1Q8VEE4 Gm42533-201ENSMUST00000196247 157 ntBASIC1.57□□□□□ -2.16
Rpa1Q8VEE4 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.57□□□□□ -2.16
Rpa1Q8VEE4 Mir5117-201ENSMUST00000083226 84 ntBASIC1.57□□□□□ -2.16
Rpa1Q8VEE4 Gm24697-201ENSMUST00000083881 107 ntBASIC1.57□□□□□ -2.16
Rpa1Q8VEE4 Gm6272-201ENSMUST00000121256 171 ntBASIC1.56□□□□□ -2.16
Rpa1Q8VEE4 Gm25836-201ENSMUST00000158918 123 ntBASIC1.56□□□□□ -2.16
Rpa1Q8VEE4 Mir7679-201ENSMUST00000183379 63 ntBASIC1.56□□□□□ -2.16
Rpa1Q8VEE4 Gm27975-201ENSMUST00000184400 101 ntBASIC1.56□□□□□ -2.16
Rpa1Q8VEE4 Gm43927-201ENSMUST00000204599 117 ntBASIC1.56□□□□□ -2.16
Rpa1Q8VEE4 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Rpa1Q8VEE4 Gm22750-201ENSMUST00000102076 103 ntBASIC1.55□□□□□ -2.16
Rpa1Q8VEE4 Gm23951-201ENSMUST00000104029 132 ntBASIC1.55□□□□□ -2.16
Rpa1Q8VEE4 Gm23528-201ENSMUST00000104571 132 ntBASIC1.55□□□□□ -2.16
Rpa1Q8VEE4 Gm24895-201ENSMUST00000122742 74 ntBASIC1.55□□□□□ -2.16
Rpa1Q8VEE4 Gm14947-201ENSMUST00000133704 303 ntBASIC1.55□□□□□ -2.16
Rpa1Q8VEE4 Gm37579-201ENSMUST00000194291 142 ntBASIC1.55□□□□□ -2.16
Rpa1Q8VEE4 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Rpa1Q8VEE4 Mir216b-201ENSMUST00000102363 86 ntBASIC1.54□□□□□ -2.16
Rpa1Q8VEE4 Gm23468-201ENSMUST00000157125 108 ntBASIC1.54□□□□□ -2.16
Rpa1Q8VEE4 Gm24177-201ENSMUST00000158927 131 ntBASIC1.54□□□□□ -2.16
Rpa1Q8VEE4 Mir3079-201ENSMUST00000175428 90 ntBASIC1.54□□□□□ -2.16
Rpa1Q8VEE4 Gm27493-201ENSMUST00000184128 78 ntBASIC1.54□□□□□ -2.16
Rpa1Q8VEE4 Gm25416-201ENSMUST00000104221 107 ntBASIC1.53□□□□□ -2.16
Rpa1Q8VEE4 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.53□□□□□ -2.16
Rpa1Q8VEE4 Gm15115-201ENSMUST00000121145 264 ntBASIC1.53□□□□□ -2.16
Rpa1Q8VEE4 Gm25166-201ENSMUST00000158909 111 ntBASIC1.53□□□□□ -2.16
Rpa1Q8VEE4 Mir7017-201ENSMUST00000184894 62 ntBASIC1.53□□□□□ -2.16
Rpa1Q8VEE4 Gm43038-201ENSMUST00000202359 88 ntBASIC1.53□□□□□ -2.16
Rpa1Q8VEE4 Mir377-201ENSMUST00000083504 68 ntBASIC1.53□□□□□ -2.16
Rpa1Q8VEE4 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Rpa1Q8VEE4 Gm25495-201ENSMUST00000104431 131 ntBASIC1.52□□□□□ -2.17
Rpa1Q8VEE4 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.52□□□□□ -2.17
Rpa1Q8VEE4 Gm23853-201ENSMUST00000158375 104 ntBASIC1.52□□□□□ -2.17
Rpa1Q8VEE4 Gm26712-201ENSMUST00000180813 217 ntBASIC1.52□□□□□ -2.17
Rpa1Q8VEE4 Gm28435-201ENSMUST00000185496 108 ntBASIC1.52□□□□□ -2.17
Rpa1Q8VEE4 Gm29047-201ENSMUST00000189816 108 ntBASIC1.52□□□□□ -2.17
Rpa1Q8VEE4 Gm24221-201ENSMUST00000158833 313 ntBASIC1.51□□□□□ -2.17
Rpa1Q8VEE4 Mir100-201ENSMUST00000175270 80 ntBASIC1.51□□□□□ -2.17
Rpa1Q8VEE4 Gm23291-201ENSMUST00000175611 78 ntBASIC1.51□□□□□ -2.17
Rpa1Q8VEE4 Mir7026-201ENSMUST00000184384 67 ntBASIC1.51□□□□□ -2.17
Rpa1Q8VEE4 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.5□□□□□ -2.17
Rpa1Q8VEE4 Gm23221-201ENSMUST00000158118 93 ntBASIC1.5□□□□□ -2.17
Rpa1Q8VEE4 Gm24394-201ENSMUST00000158141 123 ntBASIC1.5□□□□□ -2.17
Rpa1Q8VEE4 Mir1950-201ENSMUST00000158526 74 ntBASIC1.5□□□□□ -2.17
Rpa1Q8VEE4 Mir376b-201ENSMUST00000195930 82 ntBASIC1.5□□□□□ -2.17
Rpa1Q8VEE4 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.5□□□□□ -2.17
Rpa1Q8VEE4 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.49□□□□□ -2.17
Rpa1Q8VEE4 Gm23010-201ENSMUST00000104151 126 ntBASIC1.49□□□□□ -2.17
Rpa1Q8VEE4 Gm23991-201ENSMUST00000117033 93 ntBASIC1.49□□□□□ -2.17
Rpa1Q8VEE4 Snora26-201ENSMUST00000175614 121 ntBASIC1.49□□□□□ -2.17
Rpa1Q8VEE4 Gm24202-201ENSMUST00000082948 103 ntBASIC1.49□□□□□ -2.17
Rpa1Q8VEE4 Gm25061-201ENSMUST00000104665 107 ntBASIC1.48□□□□□ -2.17
Rpa1Q8VEE4 Gm43907-201ENSMUST00000203128 117 ntBASIC1.48□□□□□ -2.17
Rpa1Q8VEE4 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.48□□□□□ -2.17
Rpa1Q8VEE4 Gm25644-201ENSMUST00000083209 107 ntBASIC1.48□□□□□ -2.17
Rpa1Q8VEE4 Gm23245-201ENSMUST00000083370 135 ntBASIC1.48□□□□□ -2.17
Rpa1Q8VEE4 Mir148b-201ENSMUST00000083626 97 ntBASIC1.48□□□□□ -2.17
Rpa1Q8VEE4 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Rpa1Q8VEE4 Gm25040-201ENSMUST00000103877 66 ntBASIC1.47□□□□□ -2.17
Rpa1Q8VEE4 Gm22071-201ENSMUST00000116857 83 ntBASIC1.47□□□□□ -2.17
Rpa1Q8VEE4 Gm23048-201ENSMUST00000157237 129 ntBASIC1.47□□□□□ -2.17
Rpa1Q8VEE4 Gm22100-201ENSMUST00000157926 63 ntBASIC1.47□□□□□ -2.17
Rpa1Q8VEE4 Gm22761-201ENSMUST00000102278 96 ntBASIC1.46□□□□□ -2.18
Rpa1Q8VEE4 Gm23989-201ENSMUST00000117030 66 ntBASIC1.46□□□□□ -2.18
Rpa1Q8VEE4 Gm24183-201ENSMUST00000122572 93 ntBASIC1.46□□□□□ -2.18
Rpa1Q8VEE4 Mir7118-201ENSMUST00000197760 61 ntBASIC1.46□□□□□ -2.18
Rpa1Q8VEE4 Gm25798-201ENSMUST00000082641 107 ntBASIC1.46□□□□□ -2.18
Rpa1Q8VEE4 Mir101a-201ENSMUST00000083517 83 ntBASIC1.46□□□□□ -2.18
Rpa1Q8VEE4 Gm18433-201ENSMUST00000192747 197 ntBASIC1.45□□□□□ -2.18
Rpa1Q8VEE4 Snora75-201ENSMUST00000082903 133 ntBASIC1.45□□□□□ -2.18
Rpa1Q8VEE4 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 156.6 ms