Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Mir6905-201ENSMUST00000184228 70 ntBASIC0.24□□□□□ -2.37
Prpf39Q8K2Z2 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Prpf39Q8K2Z2 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.24□□□□□ -2.37
Prpf39Q8K2Z2 Gm25408-201ENSMUST00000104104 133 ntBASIC0.23□□□□□ -2.37
Prpf39Q8K2Z2 Gm24278-201ENSMUST00000104239 127 ntBASIC0.23□□□□□ -2.37
Prpf39Q8K2Z2 Gm24833-201ENSMUST00000116775 120 ntBASIC0.23□□□□□ -2.37
Prpf39Q8K2Z2 Scarna8-201ENSMUST00000158333 131 ntBASIC0.23□□□□□ -2.37
Prpf39Q8K2Z2 Gm26291-201ENSMUST00000158889 137 ntBASIC0.23□□□□□ -2.37
Prpf39Q8K2Z2 Gm27297-201ENSMUST00000183395 105 ntBASIC0.23□□□□□ -2.37
Prpf39Q8K2Z2 Mir376b-201ENSMUST00000195930 82 ntBASIC0.23□□□□□ -2.37
Prpf39Q8K2Z2 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Prpf39Q8K2Z2 Snord78-201ENSMUST00000104032 66 ntBASIC0.22□□□□□ -2.37
Prpf39Q8K2Z2 Gm25416-201ENSMUST00000104221 107 ntBASIC0.22□□□□□ -2.37
Prpf39Q8K2Z2 Gm23708-201ENSMUST00000104367 123 ntBASIC0.22□□□□□ -2.37
Prpf39Q8K2Z2 Gm24399-201ENSMUST00000157869 74 ntBASIC0.22□□□□□ -2.37
Prpf39Q8K2Z2 Gm23821-201ENSMUST00000158738 106 ntBASIC0.22□□□□□ -2.37
Prpf39Q8K2Z2 Gm26498-201ENSMUST00000177799 79 ntBASIC0.22□□□□□ -2.37
Prpf39Q8K2Z2 Gm26230-201ENSMUST00000180141 79 ntBASIC0.22□□□□□ -2.37
Prpf39Q8K2Z2 Gm27717-201ENSMUST00000183933 151 ntBASIC0.22□□□□□ -2.37
Prpf39Q8K2Z2 Mir6365-201ENSMUST00000183990 101 ntBASIC0.22□□□□□ -2.37
Prpf39Q8K2Z2 Mir219b-201ENSMUST00000198317 65 ntBASIC0.22□□□□□ -2.37
Prpf39Q8K2Z2 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.22□□□□□ -2.37
Prpf39Q8K2Z2 Gm22297-201ENSMUST00000083312 106 ntBASIC0.22□□□□□ -2.37
Prpf39Q8K2Z2 Gm25629-201ENSMUST00000084001 107 ntBASIC0.22□□□□□ -2.37
Prpf39Q8K2Z2 Mir802-201ENSMUST00000103258 97 ntBASIC0.21□□□□□ -2.38
Prpf39Q8K2Z2 Gm24342-201ENSMUST00000103907 104 ntBASIC0.21□□□□□ -2.38
Prpf39Q8K2Z2 Gm23601-201ENSMUST00000157259 131 ntBASIC0.21□□□□□ -2.38
Prpf39Q8K2Z2 Gm26369-201ENSMUST00000157825 100 ntBASIC0.21□□□□□ -2.38
Prpf39Q8K2Z2 Gm23065-201ENSMUST00000158236 130 ntBASIC0.21□□□□□ -2.38
Prpf39Q8K2Z2 Gm22303-201ENSMUST00000082686 122 ntBASIC0.21□□□□□ -2.38
Prpf39Q8K2Z2 Gm24208-201ENSMUST00000082783 135 ntBASIC0.21□□□□□ -2.38
Prpf39Q8K2Z2 Gm23507-201ENSMUST00000083078 107 ntBASIC0.21□□□□□ -2.38
Prpf39Q8K2Z2 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Prpf39Q8K2Z2 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.2□□□□□ -2.38
Prpf39Q8K2Z2 Gm22336-201ENSMUST00000157719 107 ntBASIC0.2□□□□□ -2.38
Prpf39Q8K2Z2 Gm38298-201ENSMUST00000193578 118 ntBASIC0.2□□□□□ -2.38
Prpf39Q8K2Z2 Gm45197-201ENSMUST00000205288 151 ntBASIC0.2□□□□□ -2.38
Prpf39Q8K2Z2 Mir3108-201ENSMUST00000175500 79 ntBASIC0.19□□□□□ -2.38
Prpf39Q8K2Z2 Gm22638-201ENSMUST00000179674 107 ntBASIC0.19□□□□□ -2.38
Prpf39Q8K2Z2 Gm10351-201ENSMUST00000087694 125 ntBASIC0.19□□□□□ -2.38
Prpf39Q8K2Z2 Mir710-201ENSMUST00000102088 110 ntBASIC0.18□□□□□ -2.38
Prpf39Q8K2Z2 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.18□□□□□ -2.38
Prpf39Q8K2Z2 Mir224-201ENSMUST00000083608 82 ntBASIC0.18□□□□□ -2.38
Prpf39Q8K2Z2 Snord80-201ENSMUST00000083801 81 ntBASIC0.18□□□□□ -2.38
Prpf39Q8K2Z2 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0.17□□□□□ -2.38
Prpf39Q8K2Z2 Gm22196-201ENSMUST00000116865 109 ntBASIC0.17□□□□□ -2.38
Prpf39Q8K2Z2 Gm22788-201ENSMUST00000157876 61 ntBASIC0.17□□□□□ -2.38
Prpf39Q8K2Z2 Gm24073-201ENSMUST00000158177 106 ntBASIC0.17□□□□□ -2.38
Prpf39Q8K2Z2 Gm22431-201ENSMUST00000158545 107 ntBASIC0.17□□□□□ -2.38
Prpf39Q8K2Z2 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Prpf39Q8K2Z2 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC0.17□□□□□ -2.38
Prpf39Q8K2Z2 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.17□□□□□ -2.38
Prpf39Q8K2Z2 Gm22652-201ENSMUST00000083207 131 ntBASIC0.17□□□□□ -2.38
Prpf39Q8K2Z2 Gm23126-201ENSMUST00000104260 134 ntBASIC0.16□□□□□ -2.38
Prpf39Q8K2Z2 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.16□□□□□ -2.38
Prpf39Q8K2Z2 Gm23900-201ENSMUST00000157569 108 ntBASIC0.16□□□□□ -2.38
Prpf39Q8K2Z2 Gm25370-201ENSMUST00000158159 94 ntBASIC0.16□□□□□ -2.38
Prpf39Q8K2Z2 Gm43927-201ENSMUST00000204599 117 ntBASIC0.16□□□□□ -2.38
Prpf39Q8K2Z2 Gm25635-201ENSMUST00000082675 131 ntBASIC0.16□□□□□ -2.38
Prpf39Q8K2Z2 Gm23654-201ENSMUST00000116758 126 ntBASIC0.15□□□□□ -2.39
Prpf39Q8K2Z2 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.15□□□□□ -2.39
Prpf39Q8K2Z2 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.15□□□□□ -2.39
Prpf39Q8K2Z2 Gm22286-201ENSMUST00000179708 107 ntBASIC0.15□□□□□ -2.39
Prpf39Q8K2Z2 Gm44327-201ENSMUST00000200068 117 ntBASIC0.15□□□□□ -2.39
Prpf39Q8K2Z2 Gm25006-201ENSMUST00000083813 107 ntBASIC0.15□□□□□ -2.39
Prpf39Q8K2Z2 Gm25056-201ENSMUST00000157372 62 ntBASIC0.14□□□□□ -2.39
Prpf39Q8K2Z2 Gm25014-201ENSMUST00000158401 103 ntBASIC0.14□□□□□ -2.39
Prpf39Q8K2Z2 Gm28001-201ENSMUST00000183561 117 ntBASIC0.14□□□□□ -2.39
Prpf39Q8K2Z2 Mir8116-201ENSMUST00000184134 97 ntBASIC0.14□□□□□ -2.39
Prpf39Q8K2Z2 Gm42845-201ENSMUST00000197766 105 ntBASIC0.14□□□□□ -2.39
Prpf39Q8K2Z2 Mir200b-201ENSMUST00000083615 70 ntBASIC0.14□□□□□ -2.39
Prpf39Q8K2Z2 Gm24916-201ENSMUST00000157287 79 ntBASIC0.13□□□□□ -2.39
Prpf39Q8K2Z2 Gm26133-201ENSMUST00000157363 100 ntBASIC0.13□□□□□ -2.39
Prpf39Q8K2Z2 Gm24686-201ENSMUST00000157755 93 ntBASIC0.13□□□□□ -2.39
Prpf39Q8K2Z2 Gm25952-201ENSMUST00000175329 74 ntBASIC0.13□□□□□ -2.39
Prpf39Q8K2Z2 Gm27851-201ENSMUST00000183529 63 ntBASIC0.13□□□□□ -2.39
Prpf39Q8K2Z2 Gm28270-201ENSMUST00000188550 109 ntBASIC0.13□□□□□ -2.39
Prpf39Q8K2Z2 Gm28328-201ENSMUST00000188869 109 ntBASIC0.13□□□□□ -2.39
Prpf39Q8K2Z2 Gm22031-201ENSMUST00000116945 126 ntBASIC0.12□□□□□ -2.39
Prpf39Q8K2Z2 Gm22558-201ENSMUST00000157326 95 ntBASIC0.12□□□□□ -2.39
Prpf39Q8K2Z2 Gm24947-201ENSMUST00000158334 110 ntBASIC0.12□□□□□ -2.39
Prpf39Q8K2Z2 Gm26007-201ENSMUST00000158798 120 ntBASIC0.12□□□□□ -2.39
Prpf39Q8K2Z2 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.12□□□□□ -2.39
Prpf39Q8K2Z2 Mir3967-201ENSMUST00000198710 68 ntBASIC0.12□□□□□ -2.39
Prpf39Q8K2Z2 Gm22981-201ENSMUST00000082611 75 ntBASIC0.12□□□□□ -2.39
Prpf39Q8K2Z2 Gm10813-201ENSMUST00000099936 90 ntBASIC0.12□□□□□ -2.39
Prpf39Q8K2Z2 Gm25915-201ENSMUST00000104265 126 ntBASIC0.11□□□□□ -2.39
Prpf39Q8K2Z2 Mir1197-201ENSMUST00000117037 120 ntBASIC0.11□□□□□ -2.39
Prpf39Q8K2Z2 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.11□□□□□ -2.39
Prpf39Q8K2Z2 Gm23986-201ENSMUST00000157144 63 ntBASIC0.11□□□□□ -2.39
Prpf39Q8K2Z2 Gm23384-201ENSMUST00000158593 103 ntBASIC0.11□□□□□ -2.39
Prpf39Q8K2Z2 Gm22503-201ENSMUST00000158983 115 ntBASIC0.11□□□□□ -2.39
Prpf39Q8K2Z2 Gm43907-201ENSMUST00000203128 117 ntBASIC0.11□□□□□ -2.39
Prpf39Q8K2Z2 Gm44803-201ENSMUST00000204384 156 ntBASIC0.11□□□□□ -2.39
Prpf39Q8K2Z2 Gm12086-201ENSMUST00000120863 228 ntBASIC0.1□□□□□ -2.39
Prpf39Q8K2Z2 Gm23434-201ENSMUST00000157179 100 ntBASIC0.1□□□□□ -2.39
Prpf39Q8K2Z2 Gm25618-201ENSMUST00000179484 107 ntBASIC0.1□□□□□ -2.39
Prpf39Q8K2Z2 Mir7077-201ENSMUST00000183991 57 ntBASIC0.1□□□□□ -2.39
Prpf39Q8K2Z2 Gm43324-201ENSMUST00000197482 289 ntBASIC0.1□□□□□ -2.39
Prpf39Q8K2Z2 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.1□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 167.2 ms