Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm43038-201ENSMUST00000202359 88 ntBASIC1.98□□□□□ -2.09
Usp40Q8BWR4 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.98□□□□□ -2.09
Usp40Q8BWR4 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.98□□□□□ -2.09
Usp40Q8BWR4 Gm25038-201ENSMUST00000082928 130 ntBASIC1.98□□□□□ -2.09
Usp40Q8BWR4 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Usp40Q8BWR4 Gm22544-201ENSMUST00000104349 127 ntBASIC1.97□□□□□ -2.09
Usp40Q8BWR4 Gm22386-201ENSMUST00000158192 129 ntBASIC1.97□□□□□ -2.09
Usp40Q8BWR4 Gm38295-201ENSMUST00000191951 151 ntBASIC1.97□□□□□ -2.09
Usp40Q8BWR4 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Usp40Q8BWR4 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.96□□□□□ -2.1
Usp40Q8BWR4 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Usp40Q8BWR4 Mir1899-201ENSMUST00000122798 96 ntBASIC1.96□□□□□ -2.1
Usp40Q8BWR4 Gm26133-201ENSMUST00000157363 100 ntBASIC1.96□□□□□ -2.1
Usp40Q8BWR4 Gm24331-201ENSMUST00000175099 67 ntBASIC1.96□□□□□ -2.1
Usp40Q8BWR4 Gm23801-201ENSMUST00000175561 67 ntBASIC1.96□□□□□ -2.1
Usp40Q8BWR4 Gm24485-201ENSMUST00000178283 67 ntBASIC1.96□□□□□ -2.1
Usp40Q8BWR4 Gm20118-201ENSMUST00000187207 162 ntBASIC1.96□□□□□ -2.1
Usp40Q8BWR4 Mir29a-201ENSMUST00000083676 88 ntBASIC1.96□□□□□ -2.1
Usp40Q8BWR4 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Usp40Q8BWR4 Gm25552-201ENSMUST00000158081 91 ntBASIC1.95□□□□□ -2.1
Usp40Q8BWR4 Gm25658-201ENSMUST00000158472 128 ntBASIC1.95□□□□□ -2.1
Usp40Q8BWR4 Gm22200-201ENSMUST00000158614 67 ntBASIC1.95□□□□□ -2.1
Usp40Q8BWR4 Mir3098-201ENSMUST00000175416 87 ntBASIC1.95□□□□□ -2.1
Usp40Q8BWR4 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.95□□□□□ -2.1
Usp40Q8BWR4 Mir509-201ENSMUST00000196089 75 ntBASIC1.95□□□□□ -2.1
Usp40Q8BWR4 Gm43911-201ENSMUST00000203097 76 ntBASIC1.95□□□□□ -2.1
Usp40Q8BWR4 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.95□□□□□ -2.1
Usp40Q8BWR4 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
Usp40Q8BWR4 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Usp40Q8BWR4 Gm6293-201ENSMUST00000050339 195 ntBASIC1.94□□□□□ -2.1
Usp40Q8BWR4 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
Usp40Q8BWR4 Gm24221-201ENSMUST00000158833 313 ntBASIC1.93□□□□□ -2.1
Usp40Q8BWR4 Gm26359-201ENSMUST00000158873 101 ntBASIC1.93□□□□□ -2.1
Usp40Q8BWR4 Gm25300-201ENSMUST00000175284 84 ntBASIC1.93□□□□□ -2.1
Usp40Q8BWR4 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.92□□□□□ -2.1
Usp40Q8BWR4 Gm25756-201ENSMUST00000103990 136 ntBASIC1.92□□□□□ -2.1
Usp40Q8BWR4 Gm23477-201ENSMUST00000158882 128 ntBASIC1.92□□□□□ -2.1
Usp40Q8BWR4 Mir3057-201ENSMUST00000175040 91 ntBASIC1.92□□□□□ -2.1
Usp40Q8BWR4 Gm22413-201ENSMUST00000175465 85 ntBASIC1.92□□□□□ -2.1
Usp40Q8BWR4 Mir6995-201ENSMUST00000183658 71 ntBASIC1.92□□□□□ -2.1
Usp40Q8BWR4 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
Usp40Q8BWR4 Gm25619-201ENSMUST00000122621 104 ntBASIC1.91□□□□□ -2.1
Usp40Q8BWR4 Gm23221-201ENSMUST00000158118 93 ntBASIC1.91□□□□□ -2.1
Usp40Q8BWR4 Gm24226-201ENSMUST00000158826 97 ntBASIC1.91□□□□□ -2.1
Usp40Q8BWR4 Gm25838-201ENSMUST00000158920 120 ntBASIC1.91□□□□□ -2.1
Usp40Q8BWR4 Gm23172-201ENSMUST00000157160 124 ntBASIC1.9□□□□□ -2.11
Usp40Q8BWR4 Gm23856-201ENSMUST00000158380 99 ntBASIC1.9□□□□□ -2.11
Usp40Q8BWR4 Gm26029-201ENSMUST00000158659 132 ntBASIC1.9□□□□□ -2.11
Usp40Q8BWR4 Gm27894-201ENSMUST00000184177 92 ntBASIC1.9□□□□□ -2.11
Usp40Q8BWR4 Mir7241-201ENSMUST00000184532 64 ntBASIC1.9□□□□□ -2.11
Usp40Q8BWR4 Gm28435-201ENSMUST00000185496 108 ntBASIC1.9□□□□□ -2.11
Usp40Q8BWR4 Gm28767-201ENSMUST00000188601 114 ntBASIC1.9□□□□□ -2.11
Usp40Q8BWR4 Gm29047-201ENSMUST00000189816 108 ntBASIC1.9□□□□□ -2.11
Usp40Q8BWR4 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.89□□□□□ -2.11
Usp40Q8BWR4 Gm25496-201ENSMUST00000104430 120 ntBASIC1.89□□□□□ -2.11
Usp40Q8BWR4 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.89□□□□□ -2.11
Usp40Q8BWR4 Gm23661-201ENSMUST00000122630 87 ntBASIC1.89□□□□□ -2.11
Usp40Q8BWR4 Mir7683-201ENSMUST00000183842 61 ntBASIC1.89□□□□□ -2.11
Usp40Q8BWR4 Mir343-201ENSMUST00000102360 75 ntBASIC1.88□□□□□ -2.11
Usp40Q8BWR4 Gm11857-201ENSMUST00000119817 324 ntBASIC1.88□□□□□ -2.11
Usp40Q8BWR4 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.88□□□□□ -2.11
Usp40Q8BWR4 Mir7063-201ENSMUST00000184158 91 ntBASIC1.88□□□□□ -2.11
Usp40Q8BWR4 Gm22753-201ENSMUST00000083657 107 ntBASIC1.88□□□□□ -2.11
Usp40Q8BWR4 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Usp40Q8BWR4 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Usp40Q8BWR4 Mir5104-201ENSMUST00000175319 94 ntBASIC1.87□□□□□ -2.11
Usp40Q8BWR4 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.87□□□□□ -2.11
Usp40Q8BWR4 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.87□□□□□ -2.11
Usp40Q8BWR4 Gm28862-201ENSMUST00000188246 163 ntBASIC1.87□□□□□ -2.11
Usp40Q8BWR4 Gm23766-201ENSMUST00000103894 80 ntBASIC1.86□□□□□ -2.11
Usp40Q8BWR4 Gm25609-201ENSMUST00000104019 104 ntBASIC1.86□□□□□ -2.11
Usp40Q8BWR4 Gm24648-201ENSMUST00000157111 132 ntBASIC1.86□□□□□ -2.11
Usp40Q8BWR4 Mir6962-201ENSMUST00000199512 63 ntBASIC1.86□□□□□ -2.11
Usp40Q8BWR4 AC160976.1-201ENSMUST00000215092 148 ntBASIC1.86□□□□□ -2.11
Usp40Q8BWR4 Snord60-201ENSMUST00000082834 78 ntBASIC1.86□□□□□ -2.11
Usp40Q8BWR4 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Usp40Q8BWR4 Gm23881-201ENSMUST00000116872 66 ntBASIC1.85□□□□□ -2.11
Usp40Q8BWR4 Gm22887-201ENSMUST00000178586 107 ntBASIC1.85□□□□□ -2.11
Usp40Q8BWR4 Mir126a-201ENSMUST00000083606 73 ntBASIC1.85□□□□□ -2.11
Usp40Q8BWR4 AC157278.1-201ENSMUST00000221621 148 ntBASIC1.84□□□□□ -2.11
Usp40Q8BWR4 Gm26082-201ENSMUST00000104070 127 ntBASIC1.83□□□□□ -2.12
Usp40Q8BWR4 Gm12469-201ENSMUST00000117623 207 ntBASIC1.83□□□□□ -2.12
Usp40Q8BWR4 Gm25622-201ENSMUST00000157217 104 ntBASIC1.83□□□□□ -2.12
Usp40Q8BWR4 Gm22403-201ENSMUST00000174919 84 ntBASIC1.83□□□□□ -2.12
Usp40Q8BWR4 Gm25730-201ENSMUST00000178753 165 ntBASIC1.83□□□□□ -2.12
Usp40Q8BWR4 Gm44962-201ENSMUST00000206460 279 ntBASIC1.83□□□□□ -2.12
Usp40Q8BWR4 Gm24151-201ENSMUST00000082758 141 ntBASIC1.83□□□□□ -2.12
Usp40Q8BWR4 Gm25652-201ENSMUST00000083780 103 ntBASIC1.83□□□□□ -2.12
Usp40Q8BWR4 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.82□□□□□ -2.12
Usp40Q8BWR4 Gm24009-201ENSMUST00000157734 93 ntBASIC1.82□□□□□ -2.12
Usp40Q8BWR4 Gm24728-201ENSMUST00000158226 125 ntBASIC1.82□□□□□ -2.12
Usp40Q8BWR4 Mir3968-201ENSMUST00000175355 100 ntBASIC1.82□□□□□ -2.12
Usp40Q8BWR4 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Usp40Q8BWR4 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1.82□□□□□ -2.12
Usp40Q8BWR4 Gm23170-201ENSMUST00000157158 106 ntBASIC1.81□□□□□ -2.12
Usp40Q8BWR4 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.81□□□□□ -2.12
Usp40Q8BWR4 Gm25629-201ENSMUST00000084001 107 ntBASIC1.81□□□□□ -2.12
Usp40Q8BWR4 Mir494-201ENSMUST00000093632 85 ntBASIC1.81□□□□□ -2.12
Usp40Q8BWR4 Gm24915-201ENSMUST00000157288 78 ntBASIC1.8□□□□□ -2.12
Usp40Q8BWR4 Gm25974-201ENSMUST00000158701 94 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 180.4 ms