Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm24374-201ENSMUST00000104394 106 ntBASIC-3□□□□□ -2.89
Usp54Q8BL06 Rny3-201ENSMUST00000083011 102 ntBASIC-3□□□□□ -2.89
Usp54Q8BL06 Gm22571-201ENSMUST00000082984 70 ntBASIC-3.01□□□□□ -2.89
Usp54Q8BL06 Gm23320-201ENSMUST00000104462 127 ntBASIC-3.02□□□□□ -2.89
Usp54Q8BL06 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-3.03□□□□□ -2.89
Usp54Q8BL06 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC-3.03□□□□□ -2.89
Usp54Q8BL06 AC192091.2-201ENSMUST00000217869 117 ntBASIC-3.03□□□□□ -2.89
Usp54Q8BL06 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC-3.03□□□□□ -2.89
Usp54Q8BL06 Gm25112-201ENSMUST00000122680 104 ntBASIC-3.04□□□□□ -2.9
Usp54Q8BL06 Mir1948-201ENSMUST00000157325 85 ntBASIC-3.04□□□□□ -2.9
Usp54Q8BL06 Gm25267-201ENSMUST00000158522 63 ntBASIC-3.04□□□□□ -2.9
Usp54Q8BL06 Mir21c-201ENSMUST00000184910 78 ntBASIC-3.04□□□□□ -2.9
Usp54Q8BL06 AC145736.2-201ENSMUST00000216305 365 ntBASIC-3.04□□□□□ -2.9
Usp54Q8BL06 AC122210.2-201ENSMUST00000220216 115 ntBASIC-3.04□□□□□ -2.9
Usp54Q8BL06 AC154213.2-201ENSMUST00000227138 187 ntBASIC-3.04□□□□□ -2.9
Usp54Q8BL06 Gm25131-201ENSMUST00000082653 151 ntBASIC-3.04□□□□□ -2.9
Usp54Q8BL06 Gm25859-201ENSMUST00000083710 91 ntBASIC-3.04□□□□□ -2.9
Usp54Q8BL06 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-3.04□□□□□ -2.9
Usp54Q8BL06 Gm22733-201ENSMUST00000158094 91 ntBASIC-3.04□□□□□ -2.9
Usp54Q8BL06 Gm23722-201ENSMUST00000083002 130 ntBASIC-3.04□□□□□ -2.9
Usp54Q8BL06 Mir509-201ENSMUST00000196089 75 ntBASIC-3.05□□□□□ -2.9
Usp54Q8BL06 Gm26479-201ENSMUST00000122620 106 ntBASIC-3.06□□□□□ -2.9
Usp54Q8BL06 Gm27263-201ENSMUST00000184760 76 ntBASIC-3.07□□□□□ -2.9
Usp54Q8BL06 Mir3071-201ENSMUST00000093621 80 ntBASIC-3.07□□□□□ -2.9
Usp54Q8BL06 Mir465c-2-201ENSMUST00000104757 81 ntBASIC-3.08□□□□□ -2.9
Usp54Q8BL06 Gm13797-201ENSMUST00000121792 120 ntBASIC-3.08□□□□□ -2.9
Usp54Q8BL06 Mir465c-1-201ENSMUST00000093560 81 ntBASIC-3.08□□□□□ -2.9
Usp54Q8BL06 Gm22591-201ENSMUST00000104243 106 ntBASIC-3.08□□□□□ -2.9
Usp54Q8BL06 Gm22451-201ENSMUST00000122803 151 ntBASIC-3.08□□□□□ -2.9
Usp54Q8BL06 Gm25424-201ENSMUST00000157612 58 ntBASIC-3.08□□□□□ -2.9
Usp54Q8BL06 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-3.08□□□□□ -2.9
Usp54Q8BL06 Gm23909-201ENSMUST00000104598 131 ntBASIC-3.09□□□□□ -2.9
Usp54Q8BL06 Gm24192-201ENSMUST00000157978 145 ntBASIC-3.09□□□□□ -2.9
Usp54Q8BL06 Gm45125-201ENSMUST00000206908 151 ntBASIC-3.09□□□□□ -2.9
Usp54Q8BL06 Cfap61-214ENSMUST00000167179 183 ntBASIC-3.1□□□□□ -2.91
Usp54Q8BL06 Gm43749-201ENSMUST00000199345 352 ntBASIC-3.1□□□□□ -2.91
Usp54Q8BL06 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-3.1□□□□□ -2.91
Usp54Q8BL06 Gm9973-202ENSMUST00000220926 166 ntBASIC-3.1□□□□□ -2.91
Usp54Q8BL06 Mir379-201ENSMUST00000083564 66 ntBASIC-3.1□□□□□ -2.91
Usp54Q8BL06 Mir29a-201ENSMUST00000083676 88 ntBASIC-3.1□□□□□ -2.91
Usp54Q8BL06 Gm23214-201ENSMUST00000122716 157 ntBASIC-3.11□□□□□ -2.91
Usp54Q8BL06 Gm23859-201ENSMUST00000158383 64 ntBASIC-3.11□□□□□ -2.91
Usp54Q8BL06 Gm23570-201ENSMUST00000083029 104 ntBASIC-3.11□□□□□ -2.91
Usp54Q8BL06 Gm14007-201ENSMUST00000118288 210 ntBASIC-3.12□□□□□ -2.91
Usp54Q8BL06 Gm24901-201ENSMUST00000158125 110 ntBASIC-3.12□□□□□ -2.91
Usp54Q8BL06 Gm23660-201ENSMUST00000178362 79 ntBASIC-3.12□□□□□ -2.91
Usp54Q8BL06 Gm24088-201ENSMUST00000179100 79 ntBASIC-3.12□□□□□ -2.91
Usp54Q8BL06 Gm27366-201ENSMUST00000184967 108 ntBASIC-3.12□□□□□ -2.91
Usp54Q8BL06 AC166358.7-201ENSMUST00000221132 108 ntBASIC-3.12□□□□□ -2.91
Usp54Q8BL06 AC125543.5-201ENSMUST00000222799 108 ntBASIC-3.12□□□□□ -2.91
Usp54Q8BL06 Gm25512-201ENSMUST00000083863 107 ntBASIC-3.12□□□□□ -2.91
Usp54Q8BL06 Gm26400-201ENSMUST00000175012 85 ntBASIC-3.12□□□□□ -2.91
Usp54Q8BL06 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC-3.12□□□□□ -2.91
Usp54Q8BL06 Mir16-2-201ENSMUST00000083672 95 ntBASIC-3.12□□□□□ -2.91
Usp54Q8BL06 Gm12647-201ENSMUST00000118977 265 ntBASIC-3.13□□□□□ -2.91
Usp54Q8BL06 Gm22089-201ENSMUST00000158336 102 ntBASIC-3.13□□□□□ -2.91
Usp54Q8BL06 Gm23017-201ENSMUST00000177583 72 ntBASIC-3.13□□□□□ -2.91
Usp54Q8BL06 AC124739.2-201ENSMUST00000222201 109 ntBASIC-3.13□□□□□ -2.91
Usp54Q8BL06 AC132918.1-201ENSMUST00000227877 925 ntBASIC-3.13□□□□□ -2.91
Usp54Q8BL06 Mir3094-201ENSMUST00000175121 64 ntBASIC-3.14□□□□□ -2.91
Usp54Q8BL06 Gm25618-201ENSMUST00000179484 107 ntBASIC-3.14□□□□□ -2.91
Usp54Q8BL06 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-3.15□□□□□ -2.91
Usp54Q8BL06 Gm22336-201ENSMUST00000157719 107 ntBASIC-3.15□□□□□ -2.91
Usp54Q8BL06 Gm25163-201ENSMUST00000158905 104 ntBASIC-3.15□□□□□ -2.91
Usp54Q8BL06 Gm22402-201ENSMUST00000174920 110 ntBASIC-3.15□□□□□ -2.91
Usp54Q8BL06 Mir485-201ENSMUST00000093620 73 ntBASIC-3.15□□□□□ -2.91
Usp54Q8BL06 Gm23016-201ENSMUST00000158431 62 ntBASIC-3.16□□□□□ -2.91
Usp54Q8BL06 Gm25449-201ENSMUST00000179389 79 ntBASIC-3.16□□□□□ -2.91
Usp54Q8BL06 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-3.17□□□□□ -2.92
Usp54Q8BL06 Gm23987-201ENSMUST00000117039 129 ntBASIC-3.17□□□□□ -2.92
Usp54Q8BL06 Gm23352-201ENSMUST00000158428 64 ntBASIC-3.17□□□□□ -2.92
Usp54Q8BL06 Gm26180-201ENSMUST00000179942 107 ntBASIC-3.17□□□□□ -2.92
Usp54Q8BL06 Gm25854-201ENSMUST00000082792 72 ntBASIC-3.17□□□□□ -2.92
Usp54Q8BL06 Gm22055-201ENSMUST00000083388 107 ntBASIC-3.17□□□□□ -2.92
Usp54Q8BL06 Gm25579-201ENSMUST00000083407 106 ntBASIC-3.17□□□□□ -2.92
Usp54Q8BL06 Gm12584-201ENSMUST00000117109 1105 ntBASIC-3.17□□□□□ -2.92
Usp54Q8BL06 Gm22434-201ENSMUST00000158549 122 ntBASIC-3.17□□□□□ -2.92
Usp54Q8BL06 Gm25285-201ENSMUST00000178951 90 ntBASIC-3.17□□□□□ -2.92
Usp54Q8BL06 Mir466c-2-201ENSMUST00000180211 90 ntBASIC-3.17□□□□□ -2.92
Usp54Q8BL06 Gm22828-201ENSMUST00000083768 107 ntBASIC-3.17□□□□□ -2.92
Usp54Q8BL06 Mir190b-201ENSMUST00000104803 80 ntBASIC-3.18□□□□□ -2.92
Usp54Q8BL06 Traj61-201ENSMUST00000165025 72 ntBASIC-3.18□□□□□ -2.92
Usp54Q8BL06 Gm29817-201ENSMUST00000210098 172 ntBASIC-3.18□□□□□ -2.92
Usp54Q8BL06 Gm23676-201ENSMUST00000157314 105 ntBASIC-3.19□□□□□ -2.92
Usp54Q8BL06 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-3.19□□□□□ -2.92
Usp54Q8BL06 AC192333.2-201ENSMUST00000224771 196 ntBASIC-3.19□□□□□ -2.92
Usp54Q8BL06 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-3.19□□□□□ -2.92
Usp54Q8BL06 Mir7673-201ENSMUST00000184567 64 ntBASIC-3.2□□□□□ -2.92
Usp54Q8BL06 Gm27798-201ENSMUST00000184989 71 ntBASIC-3.2□□□□□ -2.92
Usp54Q8BL06 Gm22197-201ENSMUST00000116866 58 ntBASIC-3.21□□□□□ -2.92
Usp54Q8BL06 Gm27285-201ENSMUST00000183875 127 ntBASIC-3.21□□□□□ -2.92
Usp54Q8BL06 Gm22946-201ENSMUST00000158558 82 ntBASIC-3.21□□□□□ -2.92
Usp54Q8BL06 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-3.21□□□□□ -2.92
Usp54Q8BL06 Gm24517-201ENSMUST00000122560 107 ntBASIC-3.22□□□□□ -2.93
Usp54Q8BL06 Gm23955-201ENSMUST00000157214 100 ntBASIC-3.22□□□□□ -2.93
Usp54Q8BL06 Gm22165-201ENSMUST00000158414 103 ntBASIC-3.22□□□□□ -2.93
Usp54Q8BL06 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC-3.22□□□□□ -2.93
Usp54Q8BL06 Gm24707-201ENSMUST00000082812 107 ntBASIC-3.22□□□□□ -2.93
Usp54Q8BL06 Gm25943-201ENSMUST00000103791 90 ntBASIC-3.23□□□□□ -2.93
Usp54Q8BL06 Mir466o-201ENSMUST00000104832 84 ntBASIC-3.23□□□□□ -2.93
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms