Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm22652-201ENSMUST00000083207 131 ntBASIC0.34□□□□□ -2.36
Smarca1Q6PGB8 Mir710-201ENSMUST00000102088 110 ntBASIC0.33□□□□□ -2.36
Smarca1Q6PGB8 Gm16186-201ENSMUST00000120132 216 ntBASIC0.33□□□□□ -2.36
Smarca1Q6PGB8 Mir3105-201ENSMUST00000175480 85 ntBASIC0.33□□□□□ -2.36
Smarca1Q6PGB8 Gm11694-201ENSMUST00000118637 159 ntBASIC0.32□□□□□ -2.36
Smarca1Q6PGB8 Gm24913-201ENSMUST00000157286 107 ntBASIC0.32□□□□□ -2.36
Smarca1Q6PGB8 Gm26152-201ENSMUST00000157427 101 ntBASIC0.32□□□□□ -2.36
Smarca1Q6PGB8 Gm22911-201ENSMUST00000177920 107 ntBASIC0.32□□□□□ -2.36
Smarca1Q6PGB8 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
Smarca1Q6PGB8 Gm22681-201ENSMUST00000083853 106 ntBASIC0.32□□□□□ -2.36
Smarca1Q6PGB8 Gm23661-201ENSMUST00000122630 87 ntBASIC0.31□□□□□ -2.36
Smarca1Q6PGB8 Scarna8-201ENSMUST00000158333 131 ntBASIC0.31□□□□□ -2.36
Smarca1Q6PGB8 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.31□□□□□ -2.36
Smarca1Q6PGB8 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.31□□□□□ -2.36
Smarca1Q6PGB8 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.31□□□□□ -2.36
Smarca1Q6PGB8 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.3□□□□□ -2.36
Smarca1Q6PGB8 Gm22775-201ENSMUST00000177630 120 ntBASIC0.3□□□□□ -2.36
Smarca1Q6PGB8 Gm23569-201ENSMUST00000180120 120 ntBASIC0.3□□□□□ -2.36
Smarca1Q6PGB8 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.3□□□□□ -2.36
Smarca1Q6PGB8 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.3□□□□□ -2.36
Smarca1Q6PGB8 Gm22303-201ENSMUST00000082686 122 ntBASIC0.3□□□□□ -2.36
Smarca1Q6PGB8 Gm25408-201ENSMUST00000104104 133 ntBASIC0.29□□□□□ -2.36
Smarca1Q6PGB8 Gm25885-201ENSMUST00000157779 109 ntBASIC0.29□□□□□ -2.36
Smarca1Q6PGB8 Gm22048-201ENSMUST00000104721 89 ntBASIC0.28□□□□□ -2.36
Smarca1Q6PGB8 Mir764-201ENSMUST00000103259 108 ntBASIC0.27□□□□□ -2.37
Smarca1Q6PGB8 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.27□□□□□ -2.37
Smarca1Q6PGB8 Gm24683-201ENSMUST00000104840 88 ntBASIC0.27□□□□□ -2.37
Smarca1Q6PGB8 Gm24009-201ENSMUST00000157734 93 ntBASIC0.27□□□□□ -2.37
Smarca1Q6PGB8 Gm22349-201ENSMUST00000157864 107 ntBASIC0.27□□□□□ -2.37
Smarca1Q6PGB8 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.27□□□□□ -2.37
Smarca1Q6PGB8 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.27□□□□□ -2.37
Smarca1Q6PGB8 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Smarca1Q6PGB8 Mir3108-201ENSMUST00000175500 79 ntBASIC0.26□□□□□ -2.37
Smarca1Q6PGB8 Gm43927-201ENSMUST00000204599 117 ntBASIC0.26□□□□□ -2.37
Smarca1Q6PGB8 Gm26168-201ENSMUST00000083787 112 ntBASIC0.26□□□□□ -2.37
Smarca1Q6PGB8 Mir216b-201ENSMUST00000102363 86 ntBASIC0.25□□□□□ -2.37
Smarca1Q6PGB8 Gm23482-201ENSMUST00000104172 122 ntBASIC0.25□□□□□ -2.37
Smarca1Q6PGB8 Gm24833-201ENSMUST00000116775 120 ntBASIC0.25□□□□□ -2.37
Smarca1Q6PGB8 Gm22708-201ENSMUST00000158987 103 ntBASIC0.25□□□□□ -2.37
Smarca1Q6PGB8 Gm44470-201ENSMUST00000203913 142 ntBASIC0.25□□□□□ -2.37
Smarca1Q6PGB8 Gm25680-201ENSMUST00000116917 126 ntBASIC0.24□□□□□ -2.37
Smarca1Q6PGB8 Gm22635-201ENSMUST00000116962 126 ntBASIC0.24□□□□□ -2.37
Smarca1Q6PGB8 Gm8034-201ENSMUST00000178853 132 ntBASIC0.24□□□□□ -2.37
Smarca1Q6PGB8 Gm22788-201ENSMUST00000157876 61 ntBASIC0.23□□□□□ -2.37
Smarca1Q6PGB8 Mir6365-201ENSMUST00000183990 101 ntBASIC0.23□□□□□ -2.37
Smarca1Q6PGB8 Gm23239-201ENSMUST00000083006 181 ntBASIC0.23□□□□□ -2.37
Smarca1Q6PGB8 Gm26412-201ENSMUST00000157666 55 ntBASIC0.22□□□□□ -2.37
Smarca1Q6PGB8 Gm22089-201ENSMUST00000158336 102 ntBASIC0.22□□□□□ -2.37
Smarca1Q6PGB8 Gm24524-201ENSMUST00000082925 170 ntBASIC0.22□□□□□ -2.37
Smarca1Q6PGB8 Mir802-201ENSMUST00000103258 97 ntBASIC0.21□□□□□ -2.38
Smarca1Q6PGB8 Gm24649-201ENSMUST00000157106 134 ntBASIC0.21□□□□□ -2.38
Smarca1Q6PGB8 Gm25056-201ENSMUST00000157372 62 ntBASIC0.21□□□□□ -2.38
Smarca1Q6PGB8 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.2□□□□□ -2.38
Smarca1Q6PGB8 Gm23601-201ENSMUST00000157259 131 ntBASIC0.2□□□□□ -2.38
Smarca1Q6PGB8 Gm26291-201ENSMUST00000158889 137 ntBASIC0.2□□□□□ -2.38
Smarca1Q6PGB8 Gm26337-201ENSMUST00000178000 79 ntBASIC0.2□□□□□ -2.38
Smarca1Q6PGB8 Gm27851-201ENSMUST00000183529 63 ntBASIC0.2□□□□□ -2.38
Smarca1Q6PGB8 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.2□□□□□ -2.38
Smarca1Q6PGB8 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.2□□□□□ -2.38
Smarca1Q6PGB8 Gm23651-201ENSMUST00000116755 120 ntBASIC0.19□□□□□ -2.38
Smarca1Q6PGB8 Gm26498-201ENSMUST00000177799 79 ntBASIC0.19□□□□□ -2.38
Smarca1Q6PGB8 Gm26230-201ENSMUST00000180141 79 ntBASIC0.19□□□□□ -2.38
Smarca1Q6PGB8 Gm28001-201ENSMUST00000183561 117 ntBASIC0.19□□□□□ -2.38
Smarca1Q6PGB8 Gm24449-201ENSMUST00000083985 106 ntBASIC0.19□□□□□ -2.38
Smarca1Q6PGB8 Gm23986-201ENSMUST00000157144 63 ntBASIC0.18□□□□□ -2.38
Smarca1Q6PGB8 Gm25623-201ENSMUST00000157216 108 ntBASIC0.18□□□□□ -2.38
Smarca1Q6PGB8 Gm25952-201ENSMUST00000175329 74 ntBASIC0.18□□□□□ -2.38
Smarca1Q6PGB8 Mir8107-201ENSMUST00000184024 117 ntBASIC0.18□□□□□ -2.38
Smarca1Q6PGB8 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Smarca1Q6PGB8 Gm45197-201ENSMUST00000205288 151 ntBASIC0.18□□□□□ -2.38
Smarca1Q6PGB8 Gm26133-201ENSMUST00000157363 100 ntBASIC0.17□□□□□ -2.38
Smarca1Q6PGB8 Gm23900-201ENSMUST00000157569 108 ntBASIC0.17□□□□□ -2.38
Smarca1Q6PGB8 Gm44327-201ENSMUST00000200068 117 ntBASIC0.17□□□□□ -2.38
Smarca1Q6PGB8 Gm23821-201ENSMUST00000158738 106 ntBASIC0.16□□□□□ -2.38
Smarca1Q6PGB8 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
Smarca1Q6PGB8 Gm25071-201ENSMUST00000175232 70 ntBASIC0.16□□□□□ -2.38
Smarca1Q6PGB8 Mir3089-201ENSMUST00000175350 84 ntBASIC0.16□□□□□ -2.38
Smarca1Q6PGB8 Gm25899-201ENSMUST00000082672 141 ntBASIC0.16□□□□□ -2.38
Smarca1Q6PGB8 Snord95-201ENSMUST00000082846 68 ntBASIC0.16□□□□□ -2.38
Smarca1Q6PGB8 Gm26062-201ENSMUST00000083379 107 ntBASIC0.16□□□□□ -2.38
Smarca1Q6PGB8 Gm10351-201ENSMUST00000087694 125 ntBASIC0.16□□□□□ -2.38
Smarca1Q6PGB8 Gm23761-201ENSMUST00000158347 104 ntBASIC0.15□□□□□ -2.39
Smarca1Q6PGB8 Gm23922-201ENSMUST00000178792 79 ntBASIC0.15□□□□□ -2.39
Smarca1Q6PGB8 Gm22638-201ENSMUST00000179674 107 ntBASIC0.15□□□□□ -2.39
Smarca1Q6PGB8 Gm24657-201ENSMUST00000180085 79 ntBASIC0.15□□□□□ -2.39
Smarca1Q6PGB8 Gm22996-201ENSMUST00000180236 79 ntBASIC0.15□□□□□ -2.39
Smarca1Q6PGB8 Gm44345-201ENSMUST00000199560 135 ntBASIC0.15□□□□□ -2.39
Smarca1Q6PGB8 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC0.14□□□□□ -2.39
Smarca1Q6PGB8 Gm24001-201ENSMUST00000158463 85 ntBASIC0.14□□□□□ -2.39
Smarca1Q6PGB8 Gm24842-201ENSMUST00000158681 54 ntBASIC0.14□□□□□ -2.39
Smarca1Q6PGB8 Gm23020-201ENSMUST00000158766 253 ntBASIC0.14□□□□□ -2.39
Smarca1Q6PGB8 Gm44859-201ENSMUST00000207831 94 ntBASIC0.14□□□□□ -2.39
Smarca1Q6PGB8 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.14□□□□□ -2.39
Smarca1Q6PGB8 Mir141-201ENSMUST00000083540 72 ntBASIC0.14□□□□□ -2.39
Smarca1Q6PGB8 Gm24793-201ENSMUST00000104289 132 ntBASIC0.13□□□□□ -2.39
Smarca1Q6PGB8 Gm22196-201ENSMUST00000116865 109 ntBASIC0.13□□□□□ -2.39
Smarca1Q6PGB8 Gm26369-201ENSMUST00000157825 100 ntBASIC0.13□□□□□ -2.39
Smarca1Q6PGB8 Gm24073-201ENSMUST00000158177 106 ntBASIC0.13□□□□□ -2.39
Smarca1Q6PGB8 Gm17528-201ENSMUST00000171026 239 ntBASIC0.13□□□□□ -2.39
Smarca1Q6PGB8 Gm44803-201ENSMUST00000204384 156 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 145.7 ms