Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm26421-201ENSMUST00000104279 132 ntBASIC0.49□□□□□ -2.33
Snrnp40Q6PE01 Gm22772-201ENSMUST00000104451 121 ntBASIC0.49□□□□□ -2.33
Snrnp40Q6PE01 Mir1197-201ENSMUST00000117037 120 ntBASIC0.49□□□□□ -2.33
Snrnp40Q6PE01 Gm25600-201ENSMUST00000158357 106 ntBASIC0.49□□□□□ -2.33
Snrnp40Q6PE01 Gm37330-201ENSMUST00000192606 153 ntBASIC0.49□□□□□ -2.33
Snrnp40Q6PE01 Gm25812-201ENSMUST00000082751 103 ntBASIC0.49□□□□□ -2.33
Snrnp40Q6PE01 Mir377-201ENSMUST00000083504 68 ntBASIC0.49□□□□□ -2.33
Snrnp40Q6PE01 Gm22030-201ENSMUST00000116942 63 ntBASIC0.48□□□□□ -2.33
Snrnp40Q6PE01 Gm24649-201ENSMUST00000157106 134 ntBASIC0.48□□□□□ -2.33
Snrnp40Q6PE01 Gm25056-201ENSMUST00000157372 62 ntBASIC0.48□□□□□ -2.33
Snrnp40Q6PE01 Gm27607-201ENSMUST00000185162 122 ntBASIC0.48□□□□□ -2.33
Snrnp40Q6PE01 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.48□□□□□ -2.33
Snrnp40Q6PE01 Gm23986-201ENSMUST00000157144 63 ntBASIC0.47□□□□□ -2.33
Snrnp40Q6PE01 Gm22520-201ENSMUST00000158269 129 ntBASIC0.47□□□□□ -2.33
Snrnp40Q6PE01 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Snrnp40Q6PE01 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
Snrnp40Q6PE01 Gm11694-201ENSMUST00000118637 159 ntBASIC0.46□□□□□ -2.34
Snrnp40Q6PE01 Gm23661-201ENSMUST00000122630 87 ntBASIC0.46□□□□□ -2.34
Snrnp40Q6PE01 Gm25425-201ENSMUST00000157611 96 ntBASIC0.46□□□□□ -2.34
Snrnp40Q6PE01 Gm26369-201ENSMUST00000157825 100 ntBASIC0.46□□□□□ -2.34
Snrnp40Q6PE01 Gm23384-201ENSMUST00000158593 103 ntBASIC0.46□□□□□ -2.34
Snrnp40Q6PE01 Gm29535-201ENSMUST00000185723 109 ntBASIC0.46□□□□□ -2.34
Snrnp40Q6PE01 Gm28143-201ENSMUST00000191082 109 ntBASIC0.46□□□□□ -2.34
Snrnp40Q6PE01 Gm44455-201ENSMUST00000200061 82 ntBASIC0.46□□□□□ -2.34
Snrnp40Q6PE01 Gm25899-201ENSMUST00000082672 141 ntBASIC0.46□□□□□ -2.34
Snrnp40Q6PE01 Gm24524-201ENSMUST00000082925 170 ntBASIC0.46□□□□□ -2.34
Snrnp40Q6PE01 Gm23507-201ENSMUST00000083078 107 ntBASIC0.46□□□□□ -2.34
Snrnp40Q6PE01 Gm25894-201ENSMUST00000083458 75 ntBASIC0.46□□□□□ -2.34
Snrnp40Q6PE01 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Snrnp40Q6PE01 Gm23482-201ENSMUST00000104172 122 ntBASIC0.45□□□□□ -2.34
Snrnp40Q6PE01 Gm25428-201ENSMUST00000157608 114 ntBASIC0.45□□□□□ -2.34
Snrnp40Q6PE01 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.45□□□□□ -2.34
Snrnp40Q6PE01 Gm26498-201ENSMUST00000177799 79 ntBASIC0.45□□□□□ -2.34
Snrnp40Q6PE01 Gm26230-201ENSMUST00000180141 79 ntBASIC0.45□□□□□ -2.34
Snrnp40Q6PE01 Mir7010-201ENSMUST00000183464 63 ntBASIC0.45□□□□□ -2.34
Snrnp40Q6PE01 Gm27980-201ENSMUST00000184094 169 ntBASIC0.45□□□□□ -2.34
Snrnp40Q6PE01 Gm23672-201ENSMUST00000157471 107 ntBASIC0.44□□□□□ -2.34
Snrnp40Q6PE01 Gm23044-201ENSMUST00000157891 100 ntBASIC0.44□□□□□ -2.34
Snrnp40Q6PE01 Gm25920-201ENSMUST00000158307 99 ntBASIC0.44□□□□□ -2.34
Snrnp40Q6PE01 Gm22031-201ENSMUST00000116945 126 ntBASIC0.43□□□□□ -2.34
Snrnp40Q6PE01 Gm25393-201ENSMUST00000157336 285 ntBASIC0.43□□□□□ -2.34
Snrnp40Q6PE01 Gm24963-201ENSMUST00000157916 144 ntBASIC0.43□□□□□ -2.34
Snrnp40Q6PE01 Gm22541-201ENSMUST00000158165 127 ntBASIC0.43□□□□□ -2.34
Snrnp40Q6PE01 Gm24129-201ENSMUST00000158537 97 ntBASIC0.43□□□□□ -2.34
Snrnp40Q6PE01 Gm23180-201ENSMUST00000158686 125 ntBASIC0.43□□□□□ -2.34
Snrnp40Q6PE01 Gm25974-201ENSMUST00000158701 94 ntBASIC0.43□□□□□ -2.34
Snrnp40Q6PE01 Gm45197-201ENSMUST00000205288 151 ntBASIC0.43□□□□□ -2.34
Snrnp40Q6PE01 Gm45429-201ENSMUST00000209527 172 ntBASIC0.43□□□□□ -2.34
Snrnp40Q6PE01 Gm24208-201ENSMUST00000082783 135 ntBASIC0.43□□□□□ -2.34
Snrnp40Q6PE01 Snora75-201ENSMUST00000082903 133 ntBASIC0.43□□□□□ -2.34
Snrnp40Q6PE01 Mir669f-201ENSMUST00000103850 121 ntBASIC0.42□□□□□ -2.34
Snrnp40Q6PE01 Gm23434-201ENSMUST00000157179 100 ntBASIC0.42□□□□□ -2.34
Snrnp40Q6PE01 Gm24916-201ENSMUST00000157287 79 ntBASIC0.42□□□□□ -2.34
Snrnp40Q6PE01 Gm24073-201ENSMUST00000158177 106 ntBASIC0.42□□□□□ -2.34
Snrnp40Q6PE01 Gm23065-201ENSMUST00000158236 130 ntBASIC0.42□□□□□ -2.34
Snrnp40Q6PE01 Gm28270-201ENSMUST00000188550 109 ntBASIC0.42□□□□□ -2.34
Snrnp40Q6PE01 Gm28328-201ENSMUST00000188869 109 ntBASIC0.42□□□□□ -2.34
Snrnp40Q6PE01 Mir1949-202ENSMUST00000199259 70 ntBASIC0.42□□□□□ -2.34
Snrnp40Q6PE01 Gm24009-201ENSMUST00000157734 93 ntBASIC0.41□□□□□ -2.34
Snrnp40Q6PE01 Gm24321-201ENSMUST00000175348 80 ntBASIC0.41□□□□□ -2.34
Snrnp40Q6PE01 Gm43432-201ENSMUST00000196352 121 ntBASIC0.41□□□□□ -2.34
Snrnp40Q6PE01 Mir7229-201ENSMUST00000197062 53 ntBASIC0.41□□□□□ -2.34
Snrnp40Q6PE01 Gm44828-201ENSMUST00000203745 106 ntBASIC0.41□□□□□ -2.34
Snrnp40Q6PE01 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Snrnp40Q6PE01 Gm22302-201ENSMUST00000082657 106 ntBASIC0.41□□□□□ -2.34
Snrnp40Q6PE01 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.41□□□□□ -2.34
Snrnp40Q6PE01 Gm25006-201ENSMUST00000083813 107 ntBASIC0.41□□□□□ -2.34
Snrnp40Q6PE01 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.41□□□□□ -2.34
Snrnp40Q6PE01 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.41□□□□□ -2.34
Snrnp40Q6PE01 Gm25497-201ENSMUST00000104425 132 ntBASIC0.4□□□□□ -2.35
Snrnp40Q6PE01 Mir376b-201ENSMUST00000195930 82 ntBASIC0.4□□□□□ -2.35
Snrnp40Q6PE01 Gm22319-201ENSMUST00000157147 122 ntBASIC0.39□□□□□ -2.35
Snrnp40Q6PE01 Gm25887-201ENSMUST00000157777 84 ntBASIC0.39□□□□□ -2.35
Snrnp40Q6PE01 Gm23994-201ENSMUST00000158059 88 ntBASIC0.39□□□□□ -2.35
Snrnp40Q6PE01 Gm22088-201ENSMUST00000158341 117 ntBASIC0.39□□□□□ -2.35
Snrnp40Q6PE01 Gm22503-201ENSMUST00000158983 115 ntBASIC0.39□□□□□ -2.35
Snrnp40Q6PE01 Mir7077-201ENSMUST00000183991 57 ntBASIC0.39□□□□□ -2.35
Snrnp40Q6PE01 Mir6896-201ENSMUST00000198033 73 ntBASIC0.39□□□□□ -2.35
Snrnp40Q6PE01 Gm44457-201ENSMUST00000198109 76 ntBASIC0.39□□□□□ -2.35
Snrnp40Q6PE01 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Snrnp40Q6PE01 AC158982.2-201ENSMUST00000226283 184 ntBASIC0.39□□□□□ -2.35
Snrnp40Q6PE01 Mir224-201ENSMUST00000083608 82 ntBASIC0.39□□□□□ -2.35
Snrnp40Q6PE01 Snord78-201ENSMUST00000104032 66 ntBASIC0.38□□□□□ -2.35
Snrnp40Q6PE01 Gm13065-201ENSMUST00000119178 141 ntBASIC0.38□□□□□ -2.35
Snrnp40Q6PE01 Gm24467-201ENSMUST00000157887 126 ntBASIC0.38□□□□□ -2.35
Snrnp40Q6PE01 Gm24167-201ENSMUST00000177733 124 ntBASIC0.38□□□□□ -2.35
Snrnp40Q6PE01 Gm24028-201ENSMUST00000178991 124 ntBASIC0.38□□□□□ -2.35
Snrnp40Q6PE01 Gm45541-201ENSMUST00000210443 54 ntBASIC0.38□□□□□ -2.35
Snrnp40Q6PE01 Gm25629-201ENSMUST00000084001 107 ntBASIC0.38□□□□□ -2.35
Snrnp40Q6PE01 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.37□□□□□ -2.35
Snrnp40Q6PE01 Gm24468-201ENSMUST00000104489 104 ntBASIC0.37□□□□□ -2.35
Snrnp40Q6PE01 Gm23531-201ENSMUST00000104567 68 ntBASIC0.37□□□□□ -2.35
Snrnp40Q6PE01 Gm22089-201ENSMUST00000158336 102 ntBASIC0.37□□□□□ -2.35
Snrnp40Q6PE01 Gm25635-201ENSMUST00000082675 131 ntBASIC0.37□□□□□ -2.35
Snrnp40Q6PE01 Gm26202-201ENSMUST00000082910 65 ntBASIC0.37□□□□□ -2.35
Snrnp40Q6PE01 Mir200a-201ENSMUST00000083466 90 ntBASIC0.37□□□□□ -2.35
Snrnp40Q6PE01 Snord80-201ENSMUST00000083801 81 ntBASIC0.37□□□□□ -2.35
Snrnp40Q6PE01 Mir216b-201ENSMUST00000102363 86 ntBASIC0.36□□□□□ -2.35
Snrnp40Q6PE01 Gm25040-201ENSMUST00000103877 66 ntBASIC0.36□□□□□ -2.35
Snrnp40Q6PE01 Gm26303-201ENSMUST00000116845 119 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 158.1 ms